Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) higBA (relBE)/COG4683-HTH_37
Location 164036..164574 Replicon chromosome
Accession NZ_CP031746
Organism Auritidibacter sp. NML130574

Toxin (Protein)


Gene name HigB2 Uniprot ID -
Locus tag DCC27_RS12275 Protein ID WP_199445857.1
Coordinates 164036..164263 (+) Length 76 a.a.

Antitoxin (Protein)


Gene name HigA2 Uniprot ID -
Locus tag DCC27_RS00860 Protein ID WP_110100392.1
Coordinates 164269..164574 (+) Length 102 a.a.

Genomic Context

DCC27_RS00825DCC27_RS00830DCC27_RS00835DCC27_RS00840DCC27_RS00850DCC27_RS12275DCC27_RS00860DCC27_RS00865DCC27_RS00870DCC27_RS00875DCC27_RS00885DCC27_RS12065DCC27_RS00895DCC27_RS00845
Location: 160099..161184 (1086 bp)
Type: Others
Protein ID: WP_110100193.1
Location: 161332..161565 (234 bp)
Type: Others
Protein ID: WP_110100006.1
Location: 161562..161987 (426 bp)
Type: Others
Protein ID: WP_110100194.1
Location: 162000..162536 (537 bp)
Type: Others
Protein ID: WP_158524689.1
Location: 163080..163805 (726 bp)
Type: Others
Protein ID: WP_110100197.1
Location: 164036..164263 (228 bp)
Type: Toxin
Protein ID: WP_199445857.1
Location: 164269..164574 (306 bp)
Type: Antitoxin
Protein ID: WP_110100392.1
Location: 164725..164958 (234 bp)
Type: Others
Protein ID: WP_110100198.1
Location: 164943..165317 (375 bp)
Type: Others
Protein ID: WP_146206389.1
Location: 165583..166347 (765 bp)
Type: Others
Protein ID: WP_110100200.1
Location: 167423..168145 (723 bp)
Type: Others
Protein ID: WP_110100393.1
Location: 168184..168660 (477 bp)
Type: Others
Protein ID: WP_148707488.1
Location: 168902..169288 (387 bp)
Type: Others
Protein ID: WP_110100203.1
Location: 162682..162876 (195 bp)
Type: Others
Protein ID: WP_146206388.1
ToxinAntitoxinOther genes
Loading, please wait
Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
DCC27_RS00825160099..161184+1086WP_110100193.1redox-regulated ATPase YchF-
DCC27_RS00830161332..161565+234WP_110100006.1Arc family DNA-binding protein-
DCC27_RS00835161562..161987+426WP_110100194.1type II toxin-antitoxin system VapC family toxin-
DCC27_RS00840162000..162536+537WP_158524689.1GNAT family N-acetyltransferase-
DCC27_RS00845162682..162876-195WP_146206388.1hypothetical protein-
DCC27_RS00850163080..163805+726WP_110100197.1hypothetical protein-
DCC27_RS12275164036..164263+228WP_199445857.1type II toxin-antitoxin system RelE/ParE family toxinToxin
DCC27_RS00860164269..164574+306WP_110100392.1helix-turn-helix domain-containing proteinAntitoxin
DCC27_RS00865164725..164958+234WP_110100198.1hypothetical protein-
DCC27_RS00870164943..165317+375WP_146206389.1hypothetical protein-
DCC27_RS00875165583..166347+765WP_110100200.1sulfite exporter TauE/SafE family protein-
DCC27_RS00885167423..168145+723WP_110100393.1sulfite exporter TauE/SafE family protein-
DCC27_RS12065168184..168660+477WP_148707488.1hypothetical protein-
DCC27_RS00895168902..169288+387WP_110100203.1hypothetical protein-

Associated MGEs

Loading, please wait
MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin HigB-like

(11-65)

Antitoxin

Cro/C1-type helix-turn-helix domain

(34-88)


Sequences

Toxin        


Download         Length: 76 a.a.        Molecular weight: 8777.09 Da        Isoelectric Point: 9.8609

>T109990 WP_199445857.1 NZ_CP031746:164036-164263 [Auritidibacter sp. NML130574]
IVDSVAGSRHKNMKELRPGSSGRSELRVLFAFDPERVAIMLIAEDKIGDWKRWYKKHISLADDLFDEHLARLRRE

Download         Length: 228 bp

>T109990 NZ_CP031746:164036-164263 [Auritidibacter sp. NML130574]
ATCGTCGACAGTGTAGCCGGGTCCCGGCATAAGAATATGAAAGAGCTCAGGCCCGGCTCGTCTGGCCGGTCCGAGTTGCG
CGTTCTGTTCGCGTTCGATCCAGAGCGAGTGGCGATCATGCTGATCGCCGAAGATAAGATCGGCGATTGGAAACGCTGGT
ATAAGAAGCACATTTCGTTGGCCGACGACCTCTTCGACGAGCATCTGGCCCGACTGAGAAGAGAGTGA

Antitoxin


Download         Length: 102 a.a.        Molecular weight: 11378.08 Da        Isoelectric Point: 9.9101

>AT109990 WP_110100392.1 NZ_CP031746:164269-164574 [Auritidibacter sp. NML130574]
MPKNLKDFVAEHPVDRGRVEAHKKRMLAEVRAYRLRELREQAGLTQAQLAERIGVGQRQVSKIEQGDLDSAKVGTIRSYL
EAVGGELSLEYVMGDQRMKVA

Download         Length: 306 bp

>AT109990 NZ_CP031746:164269-164574 [Auritidibacter sp. NML130574]
ATGCCAAAGAACCTGAAGGATTTCGTCGCCGAGCATCCTGTTGACCGGGGACGGGTTGAGGCGCACAAGAAGCGGATGCT
TGCTGAGGTTCGCGCCTACCGTCTGCGAGAGCTACGGGAGCAGGCCGGACTGACGCAAGCGCAGCTGGCAGAGCGCATTG
GCGTCGGGCAGCGGCAGGTTTCGAAGATCGAGCAAGGCGACCTCGACAGCGCGAAGGTTGGCACCATCCGCAGTTACCTT
GAGGCCGTCGGTGGCGAACTCTCCCTTGAGTACGTGATGGGAGACCAGCGAATGAAGGTCGCCTAA

Similar Proteins

Only experimentally validated proteins are listed.

Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

Loading, please wait
Source
ID
Structure
No matching records found

Antitoxin

Loading, please wait
Source
ID
Structure
No matching records found

References