Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) SprA2-sprA1AS/-
Location 980625..980786 Replicon chromosome
Accession NZ_CP031280
Organism Staphylococcus pasteuri strain 3C

Toxin (Protein)


Gene name SprA2 Uniprot ID -
Locus tag DWB95_RS04815 Protein ID WP_107999723.1
Coordinates 980625..980720 (+) Length 32 a.a.

Antitoxin (RNA)


Gene name sprA1AS
Locus tag -
Coordinates 980752..980786 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
DWB95_RS04805 976560..979493 + 2934 WP_154874287.1 AAA family ATPase -
DWB95_RS04810 979493..980434 + 942 WP_017638040.1 3'-5' exoribonuclease YhaM -
DWB95_RS04815 980625..980720 + 96 WP_107999723.1 type I toxin-antitoxin system Fst family toxin Toxin
- 980752..980786 - 35 - - Antitoxin
DWB95_RS04820 980880..981872 - 993 WP_126568313.1 peptidylprolyl isomerase -
DWB95_RS04825 982055..982612 - 558 WP_029056283.1 DUF3267 domain-containing protein -
DWB95_RS04830 982807..983178 - 372 WP_017638293.1 YtxH domain-containing protein -
DWB95_RS04835 983256..983681 - 426 WP_017638294.1 HIT family protein -
DWB95_RS04840 983813..984553 + 741 WP_154874289.1 ABC transporter ATP-binding protein -
DWB95_RS04845 984546..985769 + 1224 WP_126567503.1 ABC transporter permease -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 32 a.a.        Molecular weight: 3656.34 Da        Isoelectric Point: 8.0878

>T108829 WP_107999723.1 NZ_CP031280:980625-980720 [Staphylococcus pasteuri]
MSEIFVHIMTTVISGCIVTLFAHWLRHRNDK

Download         Length: 96 bp

>T108829 NZ_CP031280:980625-980720 [Staphylococcus pasteuri]
ATGTCTGAAATCTTTGTTCATATTATGACTACTGTTATCAGTGGTTGTATTGTTACGTTGTTTGCACATTGGCTACGGCA
TCGTAACGATAAGTAA

Antitoxin


Download         Length: 35 bp

>AT108829 NZ_CP031280:c980786-980752 [Staphylococcus pasteuri]
ACACCAATCCCCTCACTATTTGCGGTAGTGAGGGG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References