Detailed information of TA system TA108819

Bioinformatically predicted

Overview

TA module

• Type: I
• Classification (family/domain): SprG2-sprA1AS/-
• Location: 1809543..1809773
• Replicon: chromosome
• Accession: NZ_CP031275
• Organism: Staphylococcus xylosus strain

Toxin (Protein)

• Gene name: SprG2
• Uniprot ID: -
• Locus tag: DWB98_RS08555
• Protein ID: WP_081224963.1
• Coordinates: 1809666..1809773 (-)
• Length: 36 a.a.

Antitoxin (RNA)

Gene name	sprA1AS
Locus tag	-
Coordinates	1809543..1809676 (+)

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
DWB98_RS08545	1804759..1806642	-	1884	WP_047172518.1	glycosyltransferase	-
DWB98_RS08550	1807164..1807412	-	249	WP_029379025.1	GlsB/YeaQ/YmgE family stress response membrane protein	-
DWB98_RS13515	1808515..1808679	-	165	WP_158256330.1	hypothetical protein	-
-	1809543..1809676	+	134	-	-	Antitoxin
DWB98_RS08555	1809666..1809773	-	108	WP_081224963.1	putative holin-like toxin	Toxin
DWB98_RS08565	1811374..1811883	-	510	WP_145511727.1	metallophosphoesterase	-
DWB98_RS08570	1811883..1812464	-	582	WP_107542989.1	XTP/dITP diphosphatase	-
DWB98_RS08575	1812476..1813276	-	801	WP_029379028.1	glutamate racemase	-
DWB98_RS08580	1813484..1814296	-	813	WP_029379029.1	succinate dehydrogenase iron-sulfur subunit	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• Small toxic protein BsrE-like (3-35)

Sequences

Toxin

Protein

• Length: 36 a.a.
• Molecular weight: 3760.71 Da
• Isoelectric Point: 10.4997

>T108819 WP_081224963.1 NZ_CP031275:c1809773-1809666 [Staphylococcus xylosus]
VVSIVEALHLMLGFGTFIVTLLGLVIAIVKLSHKK

Nucleotide

• Length: 108 bp

>T108819 NZ_CP031275:c1809773-1809666 [Staphylococcus xylosus]
GTGGTTTCAATTGTAGAAGCGCTACACTTAATGTTAGGTTTCGGTACTTTCATCGTTACCTTATTAGGTTTAGTTATCGC
AATTGTTAAATTAAGCCATAAAAAATAA

Antitoxin

Nucleotide

• Length: 134 bp

>AT108819 NZ_CP031275:1809543-1809676 [Staphylococcus xylosus]
ATAGATAGAAAAAGGGCAACACACCATAAGTGTATCGCCCTAATGAGCCCGTTAAAAAGACGGTGGCTAGTTACTAATAA
TTATCAAAAAATAATCATCGAAACCGGCCAAAGTTAGCGATGGTTATTTTTTAT

Structures

Antitoxin