108818

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) sprG-sprF/-
Location 1809514..1809773 Replicon chromosome
Accession NZ_CP031275
Organism Staphylococcus xylosus strain

Toxin (Protein)


Gene name SprG2 Uniprot ID -
Locus tag DWB98_RS08555 Protein ID WP_081224963.1
Coordinates 1809666..1809773 (-) Length 36 a.a.

Antitoxin (RNA)


Gene name SprF1
Locus tag -
Coordinates 1809514..1809676 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
DWB98_RS08545 1804759..1806642 - 1884 WP_047172518.1 glycosyltransferase -
DWB98_RS08550 1807164..1807412 - 249 WP_029379025.1 GlsB/YeaQ/YmgE family stress response membrane protein -
DWB98_RS13515 1808515..1808679 - 165 WP_158256330.1 hypothetical protein -
- 1809514..1809676 + 163 - - Antitoxin
DWB98_RS08555 1809666..1809773 - 108 WP_081224963.1 putative holin-like toxin Toxin
DWB98_RS08565 1811374..1811883 - 510 WP_145511727.1 metallophosphoesterase -
DWB98_RS08570 1811883..1812464 - 582 WP_107542989.1 XTP/dITP diphosphatase -
DWB98_RS08575 1812476..1813276 - 801 WP_029379028.1 glutamate racemase -
DWB98_RS08580 1813484..1814296 - 813 WP_029379029.1 succinate dehydrogenase iron-sulfur subunit -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Small toxic protein BsrE-like

(3-35)


Sequences

Toxin        


Download         Length: 36 a.a.        Molecular weight: 3760.71 Da        Isoelectric Point: 10.4997

>T108818 WP_081224963.1 NZ_CP031275:c1809773-1809666 [Staphylococcus xylosus]
VVSIVEALHLMLGFGTFIVTLLGLVIAIVKLSHKK

Download         Length: 108 bp

>T108818 NZ_CP031275:c1809773-1809666 [Staphylococcus xylosus]
GTGGTTTCAATTGTAGAAGCGCTACACTTAATGTTAGGTTTCGGTACTTTCATCGTTACCTTATTAGGTTTAGTTATCGC
AATTGTTAAATTAAGCCATAAAAAATAA

Antitoxin


Download         Length: 163 bp

>AT108818 NZ_CP031275:1809514-1809676 [Staphylococcus xylosus]
TTGATAATATTTTTATGTTGTGTTAATTTATAGATAGAAAAAGGGCAACACACCATAAGTGTATCGCCCTAATGAGCCCG
TTAAAAAGACGGTGGCTAGTTACTAATAATTATCAAAAAATAATCATCGAAACCGGCCAAAGTTAGCGATGGTTATTTTT
TAT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References