Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) fst-RNAII/-
Location 323247..323441 Replicon chromosome
Accession NZ_CP031027
Organism Enterococcus faecalis strain TY1 isolate flatfish

Toxin (Protein)


Gene name fst Uniprot ID -
Locus tag DTO64_RS16820 Protein ID WP_015543884.1
Coordinates 323346..323441 (-) Length 32 a.a.

Antitoxin (RNA)


Gene name RNAII
Locus tag -
Coordinates 323247..323311 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
DTO64_RS01705 318859..320607 + 1749 WP_010708249.1 PTS transporter subunit EIIC -
DTO64_RS01710 320598..322631 + 2034 WP_002358390.1 transcription antiterminator -
DTO64_RS01715 322642..323076 + 435 WP_002358391.1 PTS sugar transporter subunit IIA -
- 323247..323311 + 65 - - Antitoxin
DTO64_RS16820 323346..323441 - 96 WP_015543884.1 type I toxin-antitoxin system Fst family toxin Toxin
DTO64_RS01725 323687..325459 + 1773 WP_010708250.1 PTS mannitol transporter subunit IICBA -
DTO64_RS01730 325474..325911 + 438 WP_002355279.1 PTS sugar transporter subunit IIA -
DTO64_RS01735 325926..327080 + 1155 WP_002355280.1 mannitol-1-phosphate 5-dehydrogenase -
DTO64_RS01740 327148..328263 - 1116 WP_002358395.1 FAD-binding oxidoreductase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 32 a.a.        Molecular weight: 3659.47 Da        Isoelectric Point: 4.6275

>T108308 WP_015543884.1 NZ_CP031027:c323441-323346 [Enterococcus faecalis]
MYEIVTKILVPIFVGIVLKLVTIWLEKQNEE

Download         Length: 96 bp

>T108308 NZ_CP031027:c323441-323346 [Enterococcus faecalis]
ATGTACGAGATTGTCACAAAAATTCTTGTGCCGATTTTTGTCGGGATTGTCCTGAAACTTGTAACCATTTGGTTGGAAAA
ACAGAACGAGGAATAA

Antitoxin


Download         Length: 65 bp

>AT108308 NZ_CP031027:323247-323311 [Enterococcus faecalis]
CTTGTGACAAAGTCGTGCATGGATGCACTAAAAAGACACCCTATTGTGGTAGGGTGTCTTTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References