Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) sprG-sprF/-
Location 2267684..2267900 Replicon chromosome
Accession NZ_CP029663
Organism Staphylococcus aureus strain AR_0228

Toxin (Protein)


Gene name SprG3 Uniprot ID Q2FWA7
Locus tag CSB84_RS12220 Protein ID WP_001802298.1
Coordinates 2267796..2267900 (-) Length 35 a.a.

Antitoxin (RNA)


Gene name SprF1
Locus tag -
Coordinates 2267684..2267739 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CSB84_RS12200 2263890..2264555 - 666 WP_001024095.1 SDR family oxidoreductase -
CSB84_RS12205 2264707..2265027 + 321 WP_000003759.1 Zn(II)-responsive metalloregulatory transcriptional repressor CzrA -
CSB84_RS12210 2265029..2266006 + 978 WP_000019734.1 CDF family zinc efflux transporter CzrB -
CSB84_RS12215 2266272..2267363 + 1092 WP_000495669.1 hypothetical protein -
- 2267684..2267739 + 56 - - Antitoxin
CSB84_RS12220 2267796..2267900 - 105 WP_001802298.1 hypothetical protein Toxin
CSB84_RS12230 2268580..2268738 + 159 WP_001792784.1 hypothetical protein -
CSB84_RS12240 2269396..2270253 - 858 WP_000370927.1 Cof-type HAD-IIB family hydrolase -
CSB84_RS12245 2270321..2271103 - 783 WP_000908182.1 ABC transporter ATP-binding protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 35 a.a.        Molecular weight: 3906.77 Da        Isoelectric Point: 5.5724

>T106178 WP_001802298.1 NZ_CP029663:c2267900-2267796 [Staphylococcus aureus]
MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK

Download         Length: 105 bp

>T106178 NZ_CP029663:c2267900-2267796 [Staphylococcus aureus]
TTGTTACTCCTAGAAAGGACTAGCATGTCTGATTTTGAAATGCTGATGGTTGTATTAACAATCATTGGTTTAGTATTGAT
TAGTACTCAAGACCATAAAAAATAA

Antitoxin


Download         Length: 56 bp

>AT106178 NZ_CP029663:2267684-2267739 [Staphylococcus aureus]
AAAAAGGGCAACACTCGGAAACATGTTACCCTAATGAGCCCGTTAAAAAGACGGTG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A2I7Y9L9

Antitoxin

Download structure file

References