Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) SprA2-SprA2AS/-
Location 453332..453516 Replicon chromosome
Accession NZ_CP029658
Organism Staphylococcus aureus strain AR_0467

Toxin (Protein)


Gene name SprA2 Uniprot ID A0A2U0ISP5
Locus tag CSC52_RS02220 Protein ID WP_000482652.1
Coordinates 453332..453439 (+) Length 36 a.a.

Antitoxin (RNA)


Gene name SprA2AS
Locus tag -
Coordinates 453456..453516 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CSC52_RS02195 448694..449167 + 474 WP_000456486.1 GyrI-like domain-containing protein -
CSC52_RS02200 449290..450501 - 1212 WP_001192075.1 multidrug effflux MFS transporter -
CSC52_RS02205 450683..451342 - 660 WP_000831298.1 membrane protein -
CSC52_RS02210 451402..452544 - 1143 WP_001176863.1 glycerate kinase -
CSC52_RS02215 452812..453198 + 387 WP_000779360.1 flippase GtxA -
CSC52_RS02220 453332..453439 + 108 WP_000482652.1 type I toxin-antitoxin system Fst family toxin Toxin
- 453456..453516 - 61 - - Antitoxin
CSC52_RS02230 454142..455905 + 1764 WP_001064825.1 ABC transporter ATP-binding protein/permease -
CSC52_RS02235 455930..457663 + 1734 WP_000486487.1 ABC transporter ATP-binding protein/permease -
CSC52_RS02245 457894..458061 + 168 Protein_418 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 36 a.a.        Molecular weight: 4011.78 Da        Isoelectric Point: 11.0582

>T106143 WP_000482652.1 NZ_CP029658:453332-453439 [Staphylococcus aureus]
MFNLLINIMTSALSGCLVAFFAHWLRTRNNKKGDK

Download         Length: 108 bp

>T106143 NZ_CP029658:453332-453439 [Staphylococcus aureus]
ATGTTCAATTTATTAATTAACATCATGACTTCAGCTTTAAGCGGCTGTCTTGTTGCGTTTTTTGCACATTGGTTACGAAC
GCGCAACAATAAAAAAGGTGACAAATAA

Antitoxin


Download         Length: 61 bp

>AT106143 NZ_CP029658:c453516-453456 [Staphylococcus aureus]
TACATAATAAATTGAACATCTAAATACACCAAATCCCCTCACTACTGCCATAGTGAGGGGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A2U0ISP5

Antitoxin

Download structure file

References