Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) sprG-sprF/-
Location 2307941..2308157 Replicon chromosome
Accession NZ_CP029087
Organism Staphylococcus aureus strain AR461

Toxin (Protein)


Gene name SprG3 Uniprot ID Q2FWA7
Locus tag CSC47_RS12205 Protein ID WP_001802298.1
Coordinates 2308053..2308157 (-) Length 35 a.a.

Antitoxin (RNA)


Gene name SprF1
Locus tag -
Coordinates 2307941..2307996 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CSC47_RS12185 2304147..2304812 - 666 WP_001024095.1 SDR family oxidoreductase -
CSC47_RS12190 2304964..2305284 + 321 WP_000003759.1 Zn(II)-responsive metalloregulatory transcriptional repressor CzrA -
CSC47_RS12195 2305286..2306263 + 978 WP_000019734.1 CDF family zinc efflux transporter CzrB -
CSC47_RS12200 2306529..2307620 + 1092 WP_000495669.1 hypothetical protein -
- 2307941..2307996 + 56 - - Antitoxin
CSC47_RS12205 2308053..2308157 - 105 WP_001802298.1 hypothetical protein Toxin
CSC47_RS12215 2308837..2308995 + 159 WP_001792784.1 hypothetical protein -
CSC47_RS12225 2309653..2310510 - 858 WP_000370923.1 Cof-type HAD-IIB family hydrolase -
CSC47_RS12230 2310578..2311360 - 783 WP_000908182.1 ABC transporter ATP-binding protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 35 a.a.        Molecular weight: 3906.77 Da        Isoelectric Point: 5.5724

>T104812 WP_001802298.1 NZ_CP029087:c2308157-2308053 [Staphylococcus aureus]
MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK

Download         Length: 105 bp

>T104812 NZ_CP029087:c2308157-2308053 [Staphylococcus aureus]
TTGTTACTCCTAGAAAGGACTAGCATGTCTGATTTTGAAATGCTGATGGTTGTATTAACAATCATTGGTTTAGTATTGAT
TAGTACTCAAGACCATAAAAAATAA

Antitoxin


Download         Length: 56 bp

>AT104812 NZ_CP029087:2307941-2307996 [Staphylococcus aureus]
AAAAAGGGCAACACTCGGAAACATGTTACCCTAATGAGCCCGTTAAAAAGACGGTG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A2I7Y9L9

Antitoxin

Download structure file

References