Detailed information of TA system TA104279

Bioinformatically predicted

Overview

TA module

• Type: I
• Classification (family/domain): fst-RNAII/Fst(toxin)
• Location: 2732..2973
• Replicon: plasmid unnamed2
• Accession: NZ_CP028837
• Organism: Enterococcus faecalis strain FC

Toxin (Protein)

• Gene name: fst
• Uniprot ID: -
• Locus tag: C9432_RS15595
• Protein ID: WP_107164701.1
• Coordinates: 2732..2842 (+)
• Length: 37 a.a.

Antitoxin (RNA)

Gene name	RNAII
Locus tag	-
Coordinates	2882..2973 (-)

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
C9432_RS15580	811..2134	+	1324	Protein_1	Y-family DNA polymerase	-
C9432_RS15585	2131..2481	+	351	WP_010774764.1	hypothetical protein	-
C9432_RS15595	2732..2842	+	111	WP_107164701.1	type I toxin-antitoxin system Fst family toxin	Toxin
-	2882..2973	-	92	NuclAT_0	-	Antitoxin
-	2882..2973	-	92	NuclAT_0	-	Antitoxin
-	2882..2973	-	92	NuclAT_0	-	Antitoxin
-	2882..2973	-	92	NuclAT_0	-	Antitoxin
C9432_RS15600	3083..3379	+	297	WP_002369747.1	hypothetical protein	-
C9432_RS15605	3633..4415	+	783	WP_002369746.1	ParA family protein	-
C9432_RS15610	4408..4764	+	357	WP_002360663.1	hypothetical protein	-
C9432_RS15615	5024..6034	+	1011	WP_002369743.1	replication initiator protein A	-
C9432_RS15620	6204..7361	+	1158	WP_002369741.1	TraB/GumN family protein	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)
	-	inside	Mobilizable plasmid	-	asa1 / cylR2 / cylL / cylS / cylM / cylB / cylA / cylI	1..77890	77890

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

No domain identified.

Sequences

Toxin

Protein

• Length: 37 a.a.
• Molecular weight: 4090.89 Da
• Isoelectric Point: 4.1672

>T104279 WP_107164701.1 NZ_CP028837:2732-2842 [Enterococcus faecalis]
VLFVKDLMSLVIAPIFVGLVLEMISRVLDEEDDSRK

Nucleotide

• Length: 111 bp

>T104279 NZ_CP028837:2732-2842 [Enterococcus faecalis]
GTGTTATTTGTGAAAGATTTAATGTCGTTGGTTATCGCACCGATCTTTGTAGGATTGGTTCTGGAAATGATTTCTCGTGT
GTTGGACGAGGAAGACGATAGCCGAAAGTAA

Antitoxin

Nucleotide

• Length: 92 bp

>AT104279 NZ_CP028837:c2973-2882 [Enterococcus faecalis]
TAAAAATATGTTATACTATAGGTGCGAAACGACATTAAATCGTACAAATAACACAAAAAGCAATCCTACGGCGAATAGGA
TTGCTTTTTTTT

Structures

Antitoxin