Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | txpA-ratA/- |
Location | 1149698..1150034 | Replicon | chromosome |
Accession | NZ_CP028720 | ||
Organism | Enterococcus faecalis strain CVM N48037F |
Toxin (Protein)
Gene name | txpA | Uniprot ID | - |
Locus tag | C7I32_RS06010 | Protein ID | WP_016619108.1 |
Coordinates | 1149891..1150034 (-) | Length | 48 a.a. |
Antitoxin (RNA)
Gene name | ratA | ||
Locus tag | - | ||
Coordinates | 1149698..1149747 (-) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
C7I32_RS06005 | 1145005..1149696 | + | 4692 | WP_010830710.1 | WxL domain-containing protein | - |
- | 1149697..1149959 | + | 263 | NuclAT_10 | - | - |
- | 1149698..1149747 | - | 50 | NuclAT_14 | - | Antitoxin |
C7I32_RS06010 | 1149891..1150034 | - | 144 | WP_016619108.1 | putative holin-like toxin | Toxin |
C7I32_RS06015 | 1150366..1151982 | - | 1617 | WP_002372620.1 | phosphatase PAP2/LCP family protein | - |
C7I32_RS06030 | 1152444..1153739 | + | 1296 | WP_033626639.1 | AAA family ATPase | - |
C7I32_RS06035 | 1153748..1154380 | + | 633 | WP_002358972.1 | RloB family protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 48 a.a. Molecular weight: 5191.13 Da Isoelectric Point: 8.6626
>T103044 WP_016619108.1 NZ_CP028720:c1150034-1149891 [Enterococcus faecalis]
MNVSTKTYERRGLLSIAEALALMISFGSFIATLIFGILEAVKEDNKK
MNVSTKTYERRGLLSIAEALALMISFGSFIATLIFGILEAVKEDNKK
Download Length: 144 bp
>T103044 NZ_CP028720:c1150034-1149891 [Enterococcus faecalis]
ATGAATGTAAGTACTAAAACCTATGAAAGGAGAGGCCTTTTGTCTATCGCAGAAGCTTTAGCTCTGATGATTAGTTTCGG
TTCTTTTATCGCAACGTTAATCTTCGGAATCCTAGAGGCTGTTAAAGAAGACAATAAAAAATAA
ATGAATGTAAGTACTAAAACCTATGAAAGGAGAGGCCTTTTGTCTATCGCAGAAGCTTTAGCTCTGATGATTAGTTTCGG
TTCTTTTATCGCAACGTTAATCTTCGGAATCCTAGAGGCTGTTAAAGAAGACAATAAAAAATAA
Antitoxin
Download Length: 50 bp
>AT103044 NZ_CP028720:c1149747-1149698 [Enterococcus faecalis]
AATAAAAATGCACGAGCCTTAGAAAAATAAGAGGCTCGGGCATTTTTATT
AATAAAAATGCACGAGCCTTAGAAAAATAAGAGGCTCGGGCATTTTTATT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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