Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | sprG-sprF/- |
Location | 1108692..1108971 | Replicon | chromosome |
Accession | NZ_CP028163 | ||
Organism | Staphylococcus aureus strain CFSAN064038 |
Toxin (Protein)
Gene name | SprG3 | Uniprot ID | Q2FWA7 |
Locus tag | C9J77_RS05645 | Protein ID | WP_001802298.1 |
Coordinates | 1108692..1108796 (+) | Length | 35 a.a. |
Antitoxin (RNA)
Gene name | SprF3 | ||
Locus tag | - | ||
Coordinates | 1108792..1108971 (-) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
C9J77_RS05610 | 1104591..1105199 | + | 609 | WP_000101714.1 | TIR domain-containing protein | - |
C9J77_RS05615 | 1105489..1106271 | + | 783 | WP_000908191.1 | ABC transporter ATP-binding protein | - |
C9J77_RS05620 | 1106339..1107196 | + | 858 | WP_000370942.1 | Cof-type HAD-IIB family hydrolase | - |
C9J77_RS05625 | 1107326..1107418 | - | 93 | WP_000220902.1 | hypothetical protein | - |
C9J77_RS05630 | 1107854..1108012 | - | 159 | WP_001792784.1 | hypothetical protein | - |
C9J77_RS05645 | 1108692..1108796 | + | 105 | WP_001802298.1 | hypothetical protein | Toxin |
- | 1108792..1108971 | - | 180 | - | - | Antitoxin |
C9J77_RS05650 | 1109294..1110385 | - | 1092 | WP_000495673.1 | hypothetical protein | - |
C9J77_RS05655 | 1110651..1111631 | - | 981 | WP_000019735.1 | CDF family zinc efflux transporter CzrB | - |
C9J77_RS05660 | 1111633..1111953 | - | 321 | WP_000003759.1 | Zn(II)-responsive metalloregulatory transcriptional repressor CzrA | - |
C9J77_RS05665 | 1112105..1112770 | + | 666 | WP_001024099.1 | SDR family oxidoreductase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 35 a.a. Molecular weight: 3906.77 Da Isoelectric Point: 5.5724
>T100706 WP_001802298.1 NZ_CP028163:1108692-1108796 [Staphylococcus aureus]
MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK
MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK
Download Length: 105 bp
>T100706 NZ_CP028163:1108692-1108796 [Staphylococcus aureus]
TTGTTACTCCTAGAAAGGACTAGCATGTCTGATTTTGAAATGCTGATGGTTGTATTAACAATCATTGGTTTAGTATTGAT
TAGTACTCAAGACCATAAAAAATAA
TTGTTACTCCTAGAAAGGACTAGCATGTCTGATTTTGAAATGCTGATGGTTGTATTAACAATCATTGGTTTAGTATTGAT
TAGTACTCAAGACCATAAAAAATAA
Antitoxin
Download Length: 180 bp
>AT100706 NZ_CP028163:c1108971-1108792 [Staphylococcus aureus]
GTGTTAAAATATATTTGTAGTAAGTAGAAGCAAAAGATGAAAATCTTTAACTCTTGAAACACAAAAAGGGCAACACTCGG
AAACATGTTACCCTAATGAGCCCGTTAAAAAGACGGTGACCTTATATTTTATTTAAAAATAGCCTTCAAAAATGCCGGTC
AAAGCGAATAGAAGGTTATT
GTGTTAAAATATATTTGTAGTAAGTAGAAGCAAAAGATGAAAATCTTTAACTCTTGAAACACAAAAAGGGCAACACTCGG
AAACATGTTACCCTAATGAGCCCGTTAAAAAGACGGTGACCTTATATTTTATTTAAAAATAGCCTTCAAAAATGCCGGTC
AAAGCGAATAGAAGGTTATT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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