TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | - (AT3484) | Predicted domain | - |
| Locus tag | orf2703 | Length | 173 a.a. |
| Coordinates | 2845790..2846311 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf2695 | 2841254..2841490 | - | 237 | ORF2695 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2696 | 2841701..2842435 | - | 735 | ORF2696 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2697 | 2842448..2843377 | - | 930 | ORF2697 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2698 | 2843393..2844346 | - | 954 | ORF2698 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2699 | 2844414..2845454 | - | 1041 | ORF2699 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2700 | 2845565..2845738 | - | 174 | ORF2700 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2701 | 2845790..2846311 | - | 522 | ORF2701 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf2702 | 2846471..2847094 | + | 624 | ORF2702 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2703 | 2847206..2848165 | - | 960 | ORF2703 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 19314.91 Da Isoelectric Point: 4.1771
>ORF2701 Orphan_TA_63 Antitoxin
MQKVKLPLTLDPVRTAQKRLDYQGIYTPDQVERVAESVVSVDSDVECSMSFAIDNQRLAV
LNGDAKVTVTLECQRCGKPFTHQVYTTYCFSPVRSDEQAEALPEAYEPIEVNEFGEIDLL
AMVEDEIILALPVVPVHDSEHCEVSEADMVFGELPEEAQKPNPFAVLASLKRK
MQKVKLPLTLDPVRTAQKRLDYQGIYTPDQVERVAESVVSVDSDVECSMSFAIDNQRLAV
LNGDAKVTVTLECQRCGKPFTHQVYTTYCFSPVRSDEQAEALPEAYEPIEVNEFGEIDLL
AMVEDEIILALPVVPVHDSEHCEVSEADMVFGELPEEAQKPNPFAVLASLKRK
Download Length: 522 bp
>ORF2701 Orphan_TA_63 Antitoxin
TTACTTACGCTTTAAGCTGGCTAATACGGCAAATGGGTTTGGCTTTTGCGCTTCTTCAGG
CAGTTCACCAAAGACCATGTCCGCTTCGGACACTTCACAGTGTTCAGAATCATGCACCGG
AACTACCGGCAAGGCGAGGATGATTTCATCTTCAACCATTGCAAGCAGATCGATTTCACC
GAATTCGTTAACCTCAATCGGTTCATACGCTTCCGGCAGTGCTTCAGCCTGTTCGTCTGA
ACGCACAGGACTAAAACAATACGTTGTGTAGACCTGATGAGTAAACGGCTTCCCGCAACG
CTGACACTCGAGCGTTACCGTCACCTTCGCATCGCCGTTTAACACTGCGAGACGTTGGTT
ATCGATAGCGAACGACATGGAGCATTCCACATCACTGTCCACACTGACTACGGATTCGGC
GACGCGCTCAACCTGATCAGGGGTATAGATACCCTGGTAATCAAGGCGTTTTTGAGCCGT
ACGAACCGGATCGAGAGTCAGGGGTAATTTTACCTTTTGCAT
TTACTTACGCTTTAAGCTGGCTAATACGGCAAATGGGTTTGGCTTTTGCGCTTCTTCAGG
CAGTTCACCAAAGACCATGTCCGCTTCGGACACTTCACAGTGTTCAGAATCATGCACCGG
AACTACCGGCAAGGCGAGGATGATTTCATCTTCAACCATTGCAAGCAGATCGATTTCACC
GAATTCGTTAACCTCAATCGGTTCATACGCTTCCGGCAGTGCTTCAGCCTGTTCGTCTGA
ACGCACAGGACTAAAACAATACGTTGTGTAGACCTGATGAGTAAACGGCTTCCCGCAACG
CTGACACTCGAGCGTTACCGTCACCTTCGCATCGCCGTTTAACACTGCGAGACGTTGGTT
ATCGATAGCGAACGACATGGAGCATTCCACATCACTGTCCACACTGACTACGGATTCGGC
GACGCGCTCAACCTGATCAGGGGTATAGATACCCTGGTAATCAAGGCGTTTTTGAGCCGT
ACGAACCGGATCGAGAGTCAGGGGTAATTTTACCTTTTGCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT3484 | Yersinia enterocolitica subsp. enterocolitica 8081 |
34.286 |
23.649 |
0.069 |