TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | - (AT183) | Predicted domain | - |
| Locus tag | orf226 | Length | 242 a.a. |
| Coordinates | 247069..247797 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf219 | 242499..243896 | + | 1398 | ORF219 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf220 | 244107..245507 | + | 1401 | ORF220 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf221 | 245877..246701 | + | 825 | ORF221 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf222 | 247069..247797 | + | 729 | ORF222 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf223 | 247942..248223 | + | 282 | ORF223 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf224 | 248160..251273 | - | 3114 | ORF224 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf225 | 251298..252455 | - | 1158 | ORF225 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf226 | 252515..252793 | + | 279 | ORF226 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 28023.43 Da Isoelectric Point: 8.7004
>ORF222 Orphan_TA_3 Antitoxin
MTHVCSVILIRRSFDIYHEQHKISLHNESIVLLEKNLADDFAFCSPDTRRLDIDELTVCH
YLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNESGVNSPILSNMLYLSCLSMF
SHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAERMYTSESLIKKKLQDENTCF
SKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYFINTFRQYYGVTPHQFAQHSPGT
FS
MTHVCSVILIRRSFDIYHEQHKISLHNESIVLLEKNLADDFAFCSPDTRRLDIDELTVCH
YLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNESGVNSPILSNMLYLSCLSMF
SHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAERMYTSESLIKKKLQDENTCF
SKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYFINTFRQYYGVTPHQFAQHSPGT
FS
Download Length: 729 bp
>ORF222 Orphan_TA_3 Antitoxin
ATGACTCATGTCTGCTCGGTGATCCTCATTCGTCGTTCATTCGATATTTATCATGAACAG
CATAAAATATCGCTGCATAACGAGAGTATCGTGCTGCTGGAGAAAAATTTGGCAGACGAT
TTTGCGTTTTGTTCACCGGATACGCGACGACTGGATATCGATGAGCTGACAGTTTGCCAT
TACTTACAAAATATTCGTCAGCTACCACGCAATTTAGGGTTACATAGCAAAGACCGTCTA
TTAATTAACCAGTCACCCCCCATGCCGCTGGTGACGGCGATTTTTGATAGCTTCAATGAA
TCCGGGGTAAATTCACCGATACTGAGCAATATGCTCTACCTTTCCTGTTTATCGATGTTT
TCTCATAAGAAAGAACTGATCCCCTTACTTTTCAATAGCATCAGCACTGTTTCAGGAAAA
GTTGAACGCCTTATTAGCTTTGATATCGCCAAACGTTGGTATCTGCGCGATATCGCGGAA
AGAATGTATACCAGCGAGAGTCTCATCAAAAAAAAGTTGCAGGATGAAAATACCTGTTTC
AGTAAAATATTACTCGCTTCCAGGATGTCGATGGCCAGACGATTACTCGAGTTACGTCAA
ATTCCTCTGCATACTATTGCAGAAAAATGTGGCTATAGCAGTACGTCGTACTTTATAAAC
ACATTTCGACAATATTATGGTGTAACGCCACATCAGTTTGCGCAACATTCGCCAGGTACC
TTTTCCTGA
ATGACTCATGTCTGCTCGGTGATCCTCATTCGTCGTTCATTCGATATTTATCATGAACAG
CATAAAATATCGCTGCATAACGAGAGTATCGTGCTGCTGGAGAAAAATTTGGCAGACGAT
TTTGCGTTTTGTTCACCGGATACGCGACGACTGGATATCGATGAGCTGACAGTTTGCCAT
TACTTACAAAATATTCGTCAGCTACCACGCAATTTAGGGTTACATAGCAAAGACCGTCTA
TTAATTAACCAGTCACCCCCCATGCCGCTGGTGACGGCGATTTTTGATAGCTTCAATGAA
TCCGGGGTAAATTCACCGATACTGAGCAATATGCTCTACCTTTCCTGTTTATCGATGTTT
TCTCATAAGAAAGAACTGATCCCCTTACTTTTCAATAGCATCAGCACTGTTTCAGGAAAA
GTTGAACGCCTTATTAGCTTTGATATCGCCAAACGTTGGTATCTGCGCGATATCGCGGAA
AGAATGTATACCAGCGAGAGTCTCATCAAAAAAAAGTTGCAGGATGAAAATACCTGTTTC
AGTAAAATATTACTCGCTTCCAGGATGTCGATGGCCAGACGATTACTCGAGTTACGTCAA
ATTCCTCTGCATACTATTGCAGAAAAATGTGGCTATAGCAGTACGTCGTACTTTATAAAC
ACATTTCGACAATATTATGGTGTAACGCCACATCAGTTTGCGCAACATTCGCCAGGTACC
TTTTCCTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT183 | Pseudomonas aeruginosa PAO1 |
34.783 |
16.197 |
0.066 |