TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | tsbA (AT10115) | Predicted domain | - |
| Locus tag | orf579 | Length | 233 a.a. |
| Coordinates | 600431..601132 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf571 | 596126..598642 | - | 2517 | ORF571 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf572 | 598672..599367 | - | 696 | ORF572 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf573 | 599447..600031 | - | 585 | ORF573 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf574 | 600431..601132 | - | 702 | ORF574 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf575 | 601187..601978 | - | 792 | ORF575 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf576 | 601968..602771 | - | 804 | ORF576 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf577 | 602810..603286 | - | 477 | ORF577 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf578 | 603453..604313 | - | 861 | ORF578 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf579 | 604326..605480 | - | 1155 | ORF579 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 25912.80 Da Isoelectric Point: 5.5802
>ORF574 Orphan_TA_10 Antitoxin
VQTLQQVENYTALSERASEYLLAVIRSKPDAVICLATGATPLLTYHYLVEKIHQQQVDIS
QLTFVKLDEWVDLPLTMPGTCETFLQQHIVQPLGLREDQLISFRSEEINETECERVTNLI
ARKGGLDLCVLGLGKNGHLGLNEPGESLQPACHISQLDARTQQHEMLKTTGRPVTRGITL
GLKDILNAREVLLLVTGEGKQDATERFLTAKVSTAIPASFLWLHSNFICLINT
VQTLQQVENYTALSERASEYLLAVIRSKPDAVICLATGATPLLTYHYLVEKIHQQQVDIS
QLTFVKLDEWVDLPLTMPGTCETFLQQHIVQPLGLREDQLISFRSEEINETECERVTNLI
ARKGGLDLCVLGLGKNGHLGLNEPGESLQPACHISQLDARTQQHEMLKTTGRPVTRGITL
GLKDILNAREVLLLVTGEGKQDATERFLTAKVSTAIPASFLWLHSNFICLINT
Download Length: 702 bp
>ORF574 Orphan_TA_10 Antitoxin
TTAGGTATTAATTAAACAAATAAAGTTACTGTGCAGCCATAAAAACGAAGCCGGGATAGC
GGTGGAGACTTTAGCCGTGAGAAAACGTTCTGTCGCATCCTGCTTTCCTTCGCCAGTCAC
CAATAACAAAACCTCGCGGGCATTGAGAATATCCTTCAGGCCTAAGGTGATCCCACGAGT
CACGGGGCGACCCGTGGTTTTTAACATCTCATGTTGCTGTGTTCTGGCATCAAGTTGACT
GATATGGCAGGCCGGTTGTAGGCTTTCTCCCGGTTCGTTCAGCCCAAGATGACCGTTTTT
CCCCAATCCTAGAACGCATAAATCCAGACCGCCTTTGCGCGCAATCAGGTTCGTTACCCG
TTCGCACTCTGTCTCATTTATCTCTTCGGAGCGAAAGCTGATGAGCTGGTCTTCACGCAG
CCCCAGCGGCTGCACGATATGCTGTTGTAGGAAAGTTTCGCAGGTGCCAGGCATCGTTAA
TGGCAGATCCACCCATTCGTCGAGCTTCACGAAGGTGAGCTGGCTGATATCAACCTGCTG
CTGGTGGATTTTTTCTACCAGATAATGATACGTCAGTAATGGCGTGGCTCCGGTCGCCAG
GCAAATCACGGCATCCGGTTTGCTACGGATCACAGCCAATAAATATTCGCTGGCTCGTTC
ACTTAACGCCGTATAGTTTTCAACTTGCTGAAGGGTTTGCAC
TTAGGTATTAATTAAACAAATAAAGTTACTGTGCAGCCATAAAAACGAAGCCGGGATAGC
GGTGGAGACTTTAGCCGTGAGAAAACGTTCTGTCGCATCCTGCTTTCCTTCGCCAGTCAC
CAATAACAAAACCTCGCGGGCATTGAGAATATCCTTCAGGCCTAAGGTGATCCCACGAGT
CACGGGGCGACCCGTGGTTTTTAACATCTCATGTTGCTGTGTTCTGGCATCAAGTTGACT
GATATGGCAGGCCGGTTGTAGGCTTTCTCCCGGTTCGTTCAGCCCAAGATGACCGTTTTT
CCCCAATCCTAGAACGCATAAATCCAGACCGCCTTTGCGCGCAATCAGGTTCGTTACCCG
TTCGCACTCTGTCTCATTTATCTCTTCGGAGCGAAAGCTGATGAGCTGGTCTTCACGCAG
CCCCAGCGGCTGCACGATATGCTGTTGTAGGAAAGTTTCGCAGGTGCCAGGCATCGTTAA
TGGCAGATCCACCCATTCGTCGAGCTTCACGAAGGTGAGCTGGCTGATATCAACCTGCTG
CTGGTGGATTTTTTCTACCAGATAATGATACGTCAGTAATGGCGTGGCTCCGGTCGCCAG
GCAAATCACGGCATCCGGTTTGCTACGGATCACAGCCAATAAATATTCGCTGGCTCGTTC
ACTTAACGCCGTATAGTTTTCAACTTGCTGAAGGGTTTGCAC
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT10115 | Staphylococcus aureus subsp. aureus N315 |
32.5 |
20.101 |
0.056 |
| AT10040 | Staphylococcus aureus subsp. aureus N315 |
32.5 |
20.101 |
0.056 |