MGE detailed information
MGE type: Conjugative plasmid MGE length: 41313 bp
Accession: NZ_OX638612 Location: 1..41313 Organism: Pseudomonas aeruginosa strain 3541 isolate 3541 Replicon: plasmid p3541_2
Accession: NZ_OX638612 Location: 1..41313 Organism: Pseudomonas aeruginosa strain 3541 isolate 3541 Replicon: plasmid p3541_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QPK16_RS32870 (JCHGIK_01055) | 180..440 | + | 261 | WP_123118596.1 | hypothetical protein | - |
| QPK16_RS32875 (JCHGIK_01060) | 1121..1957 | + | 837 | WP_015272400.1 | DUF932 domain-containing protein | - |
| QPK16_RS32880 (JCHGIK_01065) | 2013..2441 | + | 429 | WP_015272401.1 | hypothetical protein | - |
| QPK16_RS32885 (JCHGIK_01070) | 2458..2961 | + | 504 | WP_046094858.1 | hypothetical protein | - |
| QPK16_RS32890 (JCHGIK_01075) | 3022..3372 | + | 351 | WP_046094857.1 | TrfB-related DNA-binding protein | - |
| QPK16_RS32895 (JCHGIK_01080) | 3420..3632 | + | 213 | WP_172671999.1 | hypothetical protein | - |
| QPK16_RS32900 (JCHGIK_01085) | 4288..4602 | + | 315 | WP_054882042.1 | hypothetical protein | - |
| QPK16_RS32905 (JCHGIK_01090) | 4654..5205 | + | 552 | WP_012477636.1 | single-stranded DNA-binding protein | - |
| QPK16_RS32910 (JCHGIK_01095) | 5423..5677 | + | 255 | WP_054882043.1 | hypothetical protein | - |
| QPK16_RS32915 (JCHGIK_01105) | 5985..6230 | + | 246 | WP_015272406.1 | hypothetical protein | - |
| QPK16_RS32920 (JCHGIK_01110) | 6277..7056 | - | 780 | WP_046094784.1 | SprT-like domain-containing protein | - |
| QPK16_RS32925 (JCHGIK_01115) | 7325..7708 | - | 384 | WP_012477621.1 | plasmid stabilization protein StbC | - |
| QPK16_RS32930 (JCHGIK_01120) | 7728..8432 | - | 705 | WP_012477622.1 | StbB family protein | - |
| QPK16_RS32935 | 8436..8798 | - | 363 | WP_277784183.1 | hypothetical protein | - |
| QPK16_RS32940 (JCHGIK_01130) | 9293..9622 | + | 330 | WP_046094785.1 | hypothetical protein | - |
| QPK16_RS32945 (JCHGIK_01135) | 9622..11160 | + | 1539 | WP_012477637.1 | type IV secretion system DNA-binding domain-containing protein | - |
| QPK16_RS32950 (JCHGIK_01140) | 11161..14115 | + | 2955 | WP_277784181.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| QPK16_RS32955 (JCHGIK_01145) | 14151..14891 | - | 741 | WP_235584138.1 | hypothetical protein | - |
| QPK16_RS32960 (JCHGIK_01150) | 15018..15569 | - | 552 | WP_044275648.1 | hypothetical protein | - |
| QPK16_RS32965 (JCHGIK_01155) | 15622..16653 | - | 1032 | WP_058182292.1 | Type IV secretion system protein VirB11 | VF |
| QPK16_RS32970 (JCHGIK_01160) | 16665..17822 | - | 1158 | WP_044275646.1 | hypothetical protein | VF |
| QPK16_RS32975 (JCHGIK_01165) | 17819..18697 | - | 879 | WP_058182290.1 | Type IV secretion system protein virB9 | VF |
| QPK16_RS32980 (JCHGIK_01170) | 18697..19419 | - | 723 | WP_058182289.1 | Type IV secretion system protein PtlE | VF |
| QPK16_RS32985 (JCHGIK_01175) | 19700..20764 | - | 1065 | WP_044275506.1 | type IV secretion system protein | - |
| QPK16_RS32990 (JCHGIK_01180) | 20777..21022 | - | 246 | WP_019692591.1 | EexN family lipoprotein | - |
| QPK16_RS32995 (JCHGIK_01185) | 21028..21801 | - | 774 | WP_079990657.1 | Type IV secretion system protein virB5 | VF |
| QPK16_RS33000 (JCHGIK_01190) | 21803..24451 | - | 2649 | WP_044275509.1 | Type IV secretion system protein virB4 | VF |
| QPK16_RS33005 | 24451..24741 | - | 291 | WP_052439839.1 | hypothetical protein | VF |
| QPK16_RS33010 (JCHGIK_01195) | 24817..25116 | - | 300 | WP_044275512.1 | hypothetical protein | VF |
| QPK16_RS33015 (JCHGIK_01200) | 25292..26164 | - | 873 | WP_277784180.1 | hypothetical protein | VF |
| QPK16_RS33020 | 26227..26481 | + | 255 | WP_086239839.1 | H-NS histone family protein | - |
| QPK16_RS33025 (JCHGIK_01205) | 26485..26901 | + | 417 | WP_044275517.1 | hypothetical protein | - |
| QPK16_RS33030 (JCHGIK_01210) | 26906..27217 | + | 312 | WP_181726358.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| QPK16_RS33035 (JCHGIK_01215) | 27228..27569 | + | 342 | WP_277784179.1 | hypothetical protein | - |
| QPK16_RS33040 (JCHGIK_01220) | 27931..28941 | + | 1011 | WP_094988306.1 | alcohol dehydrogenase AdhP | - |
| QPK16_RS33045 (JCHGIK_01225) | 29452..30414 | + | 963 | WP_004577240.1 | IS30 family transposase ISPpu17 | Transposase |
| QPK16_RS33050 | 30673..31056 | - | 384 | WP_285741067.1 | hypothetical protein | ARG |
| QPK16_RS33055 (JCHGIK_01240) | 31325..32338 | + | 1014 | WP_000845054.1 | IS91 family transposase ISAzo26 | Transposase |
| QPK16_RS33060 (JCHGIK_01245) | 32799..33014 | + | 216 | WP_021561443.1 | antitoxin MazE family protein | Antitoxin Detail |
| QPK16_RS33065 (JCHGIK_01250) | 33014..33334 | + | 321 | WP_021561444.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| QPK16_RS33070 (JCHGIK_01255) | 33570..34133 | + | 564 | WP_021561445.1 | Tn3 family transposase ISPsy42 | Transposase |
| QPK16_RS33075 (JCHGIK_01260) | 34130..34513 | + | 384 | WP_021561446.1 | hypothetical protein | - |
| QPK16_RS33080 (JCHGIK_01265) | 34685..35026 | + | 342 | WP_123118602.1 | hypothetical protein | - |
| QPK16_RS33085 (JCHGIK_01270) | 35041..35658 | + | 618 | WP_123118601.1 | Tn3 family transposase TnBth3 | Transposase |
| QPK16_RS33090 (JCHGIK_01275) | 35645..36781 | + | 1137 | WP_123118600.1 | replication initiator protein A | - |
| QPK16_RS33095 (JCHGIK_01280) | 37393..38043 | + | 651 | WP_015272395.1 | DNA-binding protein | - |
| QPK16_RS33100 (JCHGIK_01285) | 38071..38382 | + | 312 | WP_172693829.1 | hypothetical protein | - |
| QPK16_RS33105 (JCHGIK_01290) | 38710..39135 | + | 426 | WP_044275620.1 | DUF192 domain-containing protein | - |
| QPK16_RS33110 (JCHGIK_01295) | 39145..39381 | + | 237 | WP_058182300.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| QPK16_RS33115 (JCHGIK_01300) | 39378..39812 | + | 435 | WP_123118599.1 | PIN domain-containing protein | - |
| QPK16_RS33120 (JCHGIK_01305) | 39819..40355 | + | 537 | WP_123118598.1 | hypothetical protein | - |
| QPK16_RS33125 (JCHGIK_01310) | 40371..41183 | + | 813 | WP_284033652.1 | 3'-5' exonuclease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|