MGE detailed information
MGE type: Conjugative plasmid MGE length: 74854 bp
Accession: NZ_OX637966 Location: 1..74854 Organism: Escherichia coli O25b:H4-ST131 isolate 46 Replicon: plasmid P2
Accession: NZ_OX637966 Location: 1..74854 Organism: Escherichia coli O25b:H4-ST131 isolate 46 Replicon: plasmid P2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQG90_RS26400 (1) | 1..858 | + | 858 | WP_206770100.1 | incFII family plasmid replication initiator RepA | - |
| QQG90_RS26405 (1774) | 1774..2043 | + | 270 | WP_000079938.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| QQG90_RS26410 (2043) | 2043..2321 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QQG90_RS26415 (2367) | 2367..3215 | + | 849 | WP_001526016.1 | 3'-5' exonuclease | - |
| QQG90_RS26420 (3332) | 3332..3814 | + | 483 | WP_284183371.1 | hypothetical protein | - |
| QQG90_RS26425 (4115) | 4115..4462 | + | 348 | WP_000142455.1 | DUF6404 family protein | - |
| QQG90_RS26430 (4480) | 4480..5076 | - | 597 | WP_000984342.1 | hypothetical protein | - |
| QQG90_RS26435 (5073) | 5073..5321 | - | 249 | WP_000272716.1 | hypothetical protein | - |
| QQG90_RS26440 (5651) | 5651..6103 | + | 453 | WP_000670964.1 | acyltransferase | - |
| QQG90_RS26445 (6135) | 6135..7667 | - | 1533 | WP_001017348.1 | NAD(P)-binding domain-containing protein | - |
| QQG90_RS26450 (7664) | 7664..7933 | - | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| QQG90_RS26455 (7935) | 7935..8951 | - | 1017 | WP_000583430.1 | Gfo/Idh/MocA family oxidoreductase | - |
| QQG90_RS26460 (8951) | 8951..9781 | - | 831 | WP_000154004.1 | HAD-IIB family hydrolase | - |
| QQG90_RS26465 (9765) | 9765..11003 | - | 1239 | WP_001311062.1 | 3-oxo-glucose-6-phosphate:glutamate aminotransferase | VF |
| QQG90_RS26470 (11824) | 11824..11979 | + | 156 | WP_000465037.1 | hypothetical protein | - |
| QQG90_RS26475 (12144) | 12144..12494 | - | 351 | WP_000361384.1 | plasmid partitioning/stability family protein | - |
| QQG90_RS26480 (12497) | 12497..13459 | - | 963 | WP_000959883.1 | plasmid segregation protein ParM | - |
| QQG90_RS26485 (13607) | 13607..13900 | + | 294 | WP_032147013.1 | hypothetical protein | - |
| QQG90_RS26490 (13995) | 13995..14897 | + | 903 | WP_032072842.1 | DUF1281 domain-containing protein | - |
| QQG90_RS26495 (14894) | 14894..15205 | + | 312 | WP_032144809.1 | hypothetical protein | - |
| QQG90_RS26500 (15282) | 15282..15965 | + | 684 | WP_000085885.1 | DNA methylase | - |
| QQG90_RS26505 (15966) | 15966..16187 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| QQG90_RS26510 (16117) | 16117..16635 | + | 519 | WP_223156508.1 | DUF1380 family protein | - |
| QQG90_RS26515 (16680) | 16680..17450 | + | 771 | WP_001006242.1 | hypothetical protein | - |
| QQG90_RS26520 (17866) | 17866..18291 | + | 426 | WP_001198898.1 | antirestriction protein | - |
| QQG90_RS26525 (18338) | 18338..18760 | + | 423 | WP_000271722.1 | DUF1380 family protein | - |
| QQG90_RS26530 (18757) | 18757..18948 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| QQG90_RS26535 (19991) | 19991..20221 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| QQG90_RS26540 (20273) | 20273..21634 | + | 1362 | WP_000170696.1 | DUF3560 domain-containing protein | - |
| QQG90_RS26545 (21681) | 21681..22244 | + | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| QQG90_RS26550 (22244) | 22244..22498 | + | 255 | WP_079403996.1 | hypothetical protein | - |
| QQG90_RS26555 (22396) | 22396..22632 | + | 237 | WP_162756886.1 | hypothetical protein | - |
| QQG90_RS26560 (23793) | 23793..25694 | + | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| QQG90_RS26565 (25844) | 25844..26341 | + | 498 | WP_138168781.1 | single-stranded DNA-binding protein | - |
| QQG90_RS26570 (26403) | 26403..26636 | + | 234 | WP_000006030.1 | DUF905 family protein | - |
| QQG90_RS26575 (26701) | 26701..28659 | + | 1959 | WP_001526004.1 | ParB/RepB/Spo0J family partition protein | - |
| QQG90_RS26580 (28714) | 28714..29148 | + | 435 | WP_000845910.1 | conjugation system SOS inhibitor PsiB | - |
| QQG90_RS26585 (29145) | 29145..29907 | + | 763 | Protein_37 | plasmid SOS inhibition protein A | - |
| QQG90_RS26590 (29876) | 29876..30064 | - | 189 | WP_001336239.1 | hypothetical protein | - |
| - (30033) | 30033..30098 | + | 66 | NuclAT_1 | - | Antitoxin Detail |
| - (29876) | 29876..30100 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (29876) | 29876..30100 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (29876) | 29876..30100 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (29876) | 29876..30100 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (29876) | 29876..30100 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| QQG90_RS26595 (30086) | 30086..30235 | + | 150 | Protein_39 | plasmid maintenance protein Mok | - |
| QQG90_RS26600 (30177) | 30177..30302 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QQG90_RS26605 (30756) | 30756..30929 | - | 174 | Protein_41 | hypothetical protein | - |
| QQG90_RS26610 (31229) | 31229..31516 | + | 288 | WP_000107526.1 | hypothetical protein | - |
| QQG90_RS26615 (31635) | 31635..32456 | + | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| QQG90_RS26620 (32751) | 32751..33353 | - | 603 | WP_023908348.1 | hypothetical protein | VF |
| QQG90_RS26625 (33676) | 33676..34059 | + | 384 | WP_001354030.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QQG90_RS26630 (34253) | 34253..34924 | + | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| QQG90_RS26635 (35061) | 35061..35288 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| QQG90_RS26640 (35321) | 35321..35680 | + | 360 | WP_016239104.1 | type IV conjugative transfer system pilin TraA | - |
| QQG90_RS26645 (35695) | 35695..36006 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| QQG90_RS26650 (36028) | 36028..36594 | + | 567 | WP_016239103.1 | type IV conjugative transfer system protein TraE | - |
| QQG90_RS26655 (36581) | 36581..37309 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| QQG90_RS26660 (37309) | 37309..38760 | + | 1452 | WP_001673169.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QQG90_RS26665 (38750) | 38750..39316 | + | 567 | WP_001526038.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QQG90_RS26670 (39303) | 39303..39626 | + | 324 | WP_023908346.1 | conjugal transfer protein TrbD | - |
| QQG90_RS26675 (39619) | 39619..40128 | + | 510 | WP_001526036.1 | hypothetical protein | - |
| QQG90_RS26680 (40121) | 40121..40633 | + | 513 | WP_001526035.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QQG90_RS26685 (40768) | 40768..40989 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| QQG90_RS26690 (40982) | 40982..41395 | + | 414 | WP_000549589.1 | hypothetical protein | - |
| QQG90_RS26695 (41388) | 41388..41861 | + | 474 | WP_001526034.1 | hypothetical protein | - |
| QQG90_RS26700 (41942) | 41942..42160 | + | 219 | WP_000556751.1 | hypothetical protein | - |
| QQG90_RS26705 (42188) | 42188..42535 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| QQG90_RS26710 (42661) | 42661..45291 | + | 2631 | WP_001526033.1 | type IV secretion system protein TraC | - |
| QQG90_RS26715 (45288) | 45288..45674 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| QQG90_RS26720 (45671) | 45671..46303 | + | 633 | WP_001526032.1 | type-F conjugative transfer system protein TraW | - |
| QQG90_RS26725 (46300) | 46300..47292 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| QQG90_RS26730 (47319) | 47319..47627 | + | 309 | WP_000412447.1 | hypothetical protein | - |
| QQG90_RS26735 (47690) | 47690..48208 | + | 519 | WP_000009087.1 | hypothetical protein | - |
| QQG90_RS26740 (48235) | 48235..48324 | + | 90 | Protein_68 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QQG90_RS26745 (48416) | 48416..48595 | + | 180 | WP_001750891.1 | hypothetical protein | - |
| QQG90_RS26750 (49024) | 49024..49662 | + | 639 | WP_001035183.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QQG90_RS26755 (49659) | 49659..50030 | + | 372 | WP_000056340.1 | hypothetical protein | - |
| QQG90_RS26760 (50055) | 50055..50477 | + | 423 | WP_001673172.1 | HNH endonuclease signature motif containing protein | - |
| QQG90_RS26765 (50474) | 50474..52324 | + | 1851 | WP_284183373.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QQG90_RS26770 (52351) | 52351..52608 | + | 258 | WP_000864329.1 | conjugal transfer protein TrbE | - |
| QQG90_RS26775 (52601) | 52601..53344 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QQG90_RS26780 (53358) | 53358..53699 | + | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| QQG90_RS26785 (53680) | 53680..54015 | - | 336 | WP_000736414.1 | hypothetical protein | - |
| QQG90_RS26790 (54096) | 54096..54380 | + | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QQG90_RS26795 (54367) | 54367..54912 | + | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QQG90_RS26800 (54842) | 54842..55189 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| QQG90_RS26805 (55170) | 55170..55562 | + | 393 | WP_000660700.1 | F-type conjugal transfer protein TrbF | - |
| QQG90_RS26810 (55549) | 55549..56922 | + | 1374 | WP_001526028.1 | conjugal transfer pilus assembly protein TraH | - |
| QQG90_RS26815 (56919) | 56919..59744 | + | 2826 | WP_023908339.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QQG90_RS26820 (59741) | 59741..60250 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| QQG90_RS26825 (60264) | 60264..60995 | + | 732 | WP_000850422.1 | conjugal transfer complement resistance protein TraT | - |
| QQG90_RS26830 (61198) | 61198..61935 | + | 738 | WP_001673178.1 | hypothetical protein | - |
| QQG90_RS26835 (61986) | 61986..64247 | + | 2262 | WP_284183374.1 | type IV conjugative transfer system coupling protein TraD | - |
| QQG90_RS26840 (64247) | 64247..69517 | + | 5271 | WP_284183375.1 | Multifunctional conjugation protein TraI | Relaxase |
| QQG90_RS26845 (69537) | 69537..70283 | + | 747 | WP_000205712.1 | conjugal transfer pilus acetylase TraX | - |
| QQG90_RS26850 (70342) | 70342..71202 | + | 861 | WP_001526022.1 | putative protein YcjY | VF |
| QQG90_RS26855 (71305) | 71305..71865 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| QQG90_RS26860 (71994) | 71994..72206 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| QQG90_RS26865 (72451) | 72451..72912 | + | 462 | WP_001233842.1 | thermonuclease family protein | - |
| QQG90_RS26870 (72958) | 72958..73167 | + | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| QQG90_RS26875 (73205) | 73205..73399 | + | 195 | Protein_95 | hypothetical protein | - |
| QQG90_RS26880 (73655) | 73655..74056 | + | 402 | Protein_96 | DUF2726 domain-containing protein | - |
| QQG90_RS26885 (74296) | 74296..74553 | + | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| QQG90_RS26890 (74788) | 74788..74854 | + | 67 | WP_032190884.1 | RepA leader peptide Tap | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|