MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 80904 bp
Accession: NZ_OX458337 Location: 1..80904 Organism: Pseudomonas syringae pv. tomato strain DAPP-PG 215 isolate IPVPG 215 Replicon: plasmid p81
Accession: NZ_OX458337 Location: 1..80904 Organism: Pseudomonas syringae pv. tomato strain DAPP-PG 215 isolate IPVPG 215 Replicon: plasmid p81
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QWJ11_RS29055 (DAPPPG215_29375) | 1..1314 | + | 1314 | WP_007247229.1 | replication initiation protein | - |
| QWJ11_RS29060 (DAPPPG215_29380) | 1616..2824 | - | 1209 | WP_225983008.1 | IS91 family transposase IS801 | Transposase |
| QWJ11_RS29065 (DAPPPG215_29385) | 2826..3107 | - | 282 | WP_032649429.1 | hypothetical protein | - |
| QWJ11_RS29070 (DAPPPG215_29390) | 3318..3605 | + | 288 | WP_010209640.1 | HU family DNA-binding protein | - |
| QWJ11_RS29075 (DAPPPG215_29395) | 3846..4544 | + | 699 | WP_007247667.1 | GNAT family N-acetyltransferase | - |
| QWJ11_RS29085 (DAPPPG215_29410) | 7831..8088 | + | 258 | WP_003381346.1 | Arc family DNA-binding protein | Antitoxin Detail |
| QWJ11_RS29090 (DAPPPG215_29415) | 8085..8504 | + | 420 | WP_007247669.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QWJ11_RS29095 (DAPPPG215_29420) | 8545..9177 | + | 633 | WP_054091164.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| QWJ11_RS29100 (DAPPPG215_29425) | 9452..10387 | + | 936 | WP_007247583.1 | AvrD family protein | - |
| QWJ11_RS29105 (DAPPPG215_29430) | 10729..11376 | + | 648 | WP_007247582.1 | histidine phosphatase family protein | - |
| QWJ11_RS29110 (DAPPPG215_29435) | 11615..12442 | + | 828 | WP_032643351.1 | TauD/TfdA family dioxygenase | - |
| QWJ11_RS29115 (DAPPPG215_29440) | 12460..13494 | + | 1035 | WP_010212085.1 | sulfotransferase domain-containing protein | - |
| QWJ11_RS29120 (DAPPPG215_29445) | 13535..14737 | + | 1203 | WP_005734276.1 | aspartate aminotransferase family protein | - |
| QWJ11_RS29125 (DAPPPG215_29450) | 14774..15430 | + | 657 | WP_007247578.1 | 2OG-Fe(II) oxygenase family protein | - |
| QWJ11_RS29130 (DAPPPG215_29455) | 15430..16008 | + | 579 | WP_005746172.1 | AAA family ATPase | - |
| QWJ11_RS29135 (DAPPPG215_29460) | 16214..16450 | + | 237 | WP_007247577.1 | carbon storage regulator | - |
| QWJ11_RS29140 (DAPPPG215_29465) | 16948..19065 | + | 2118 | WP_203307840.1 | XopB/HopD1 family type III secretion system effector | - |
| QWJ11_RS29145 (DAPPPG215_29470) | 19181..20404 | - | 1224 | WP_005769931.1 | type III secretion system effector HopQ1-1 | - |
| QWJ11_RS29150 (DAPPPG215_29475) | 20654..21160 | - | 507 | Protein_19 | IS3 family transposase IS51 | Transposase |
| QWJ11_RS29155 (DAPPPG215_29480) | 21378..22010 | + | 633 | WP_054089639.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| QWJ11_RS29160 (DAPPPG215_29485) | 22086..22313 | - | 228 | WP_007247605.1 | hypothetical protein | - |
| QWJ11_RS29165 (DAPPPG215_29490) | 22316..22678 | - | 363 | WP_007247606.1 | hypothetical protein | - |
| QWJ11_RS29170 (DAPPPG215_29495) | 23093..24241 | + | 1149 | WP_005734775.1 | DNA cytosine methyltransferase | - |
| QWJ11_RS29175 (DAPPPG215_29500) | 24241..25170 | + | 930 | WP_007247608.1 | DUF4928 family protein | - |
| QWJ11_RS29180 (DAPPPG215_29505) | 25231..26145 | - | 915 | WP_007247609.1 | DUF4868 domain-containing protein | - |
| QWJ11_RS29185 (DAPPPG215_29510) | 26148..26402 | - | 255 | WP_010213045.1 | hypothetical protein | - |
| QWJ11_RS29190 (DAPPPG215_29515) | 26595..27100 | + | 506 | Protein_27 | IS3 family transposase IS1240 | Transposase |
| QWJ11_RS29195 | 27481..27672 | - | 192 | WP_230678184.1 | YopT-type cysteine protease domain-containing protein | - |
| QWJ11_RS29200 (DAPPPG215_29530) | 27906..28928 | + | 1023 | WP_002551322.1 | IS21 family transposase ISPsy4 | Transposase |
| QWJ11_RS29205 (DAPPPG215_29535) | 28925..29734 | + | 810 | WP_005741073.1 | IS21 family transposase ISPsy4 | Transposase |
| QWJ11_RS29210 (DAPPPG215_29545) | 30389..31126 | + | 738 | Protein_31 | IS3 family transposase IS1240 | Transposase |
| QWJ11_RS29215 (DAPPPG215_29550) | 31127..31816 | - | 690 | WP_230678128.1 | hypothetical protein | - |
| QWJ11_RS29220 (DAPPPG215_29555) | 32201..33451 | + | 1251 | WP_007247507.1 | IS256 family transposase ISPsy17 | Transposase |
| QWJ11_RS29225 (DAPPPG215_29560) | 33550..33831 | - | 282 | WP_004666803.1 | hypothetical protein | - |
| QWJ11_RS29230 (DAPPPG215_29565) | 33831..34514 | - | 684 | WP_002556051.1 | AAA family ATPase | - |
| QWJ11_RS29235 (DAPPPG215_29570) | 34852..35109 | + | 258 | Protein_36 | TraR/DksA family transcriptional regulator | - |
| QWJ11_RS29240 (DAPPPG215_29575) | 35147..35368 | + | 222 | WP_007247505.1 | hypothetical protein | - |
| QWJ11_RS29245 (DAPPPG215_29585) | 35701..36321 | - | 621 | WP_005747119.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| QWJ11_RS29250 | 36632..37045 | + | 414 | WP_010213659.1 | TrfB-related DNA-binding protein | - |
| QWJ11_RS29255 (DAPPPG215_29590) | 37506..37883 | + | 378 | WP_007247501.1 | hypothetical protein | - |
| QWJ11_RS29260 (DAPPPG215_29595) | 37930..38766 | + | 837 | Protein_41 | DUF932 domain-containing protein | - |
| QWJ11_RS29265 (DAPPPG215_29600) | 38824..39012 | + | 189 | WP_007247499.1 | hypothetical protein | - |
| QWJ11_RS29270 (DAPPPG215_29605) | 39086..39364 | - | 279 | WP_007247498.1 | hypothetical protein | - |
| QWJ11_RS29275 (DAPPPG215_29615) | 39809..40138 | + | 330 | WP_003344297.1 | plasmid mobilization protein MobA | - |
| QWJ11_RS29280 (DAPPPG215_29620) | 40149..42104 | + | 1956 | WP_105224199.1 | hypothetical protein | Relaxase |
| QWJ11_RS29285 (DAPPPG215_29625) | 42439..43140 | + | 702 | WP_010207517.1 | FadR/GntR family transcriptional regulator | - |
| QWJ11_RS29290 (DAPPPG215_29630) | 43209..44402 | + | 1194 | WP_010215819.1 | L-2-hydroxyglutarate oxidase | - |
| QWJ11_RS29295 (DAPPPG215_29635) | 44443..45144 | + | 702 | Protein_48 | MFS transporter | - |
| QWJ11_RS29300 (DAPPPG215_29640) | 45240..46262 | + | 1023 | WP_002551322.1 | IS21 family transposase ISPsy4 | Transposase |
| QWJ11_RS29305 (DAPPPG215_29645) | 46259..47068 | + | 810 | WP_005741073.1 | IS21 family transposase ISPsy4 | Transposase |
| QWJ11_RS29310 (DAPPPG215_29650) | 47128..47757 | + | 630 | Protein_51 | MFS transporter | - |
| QWJ11_RS29315 (DAPPPG215_29655) | 47798..47983 | + | 186 | WP_010215822.1 | hypothetical protein | - |
| QWJ11_RS29320 | 48005..48388 | - | 384 | WP_003344338.1 | helix-turn-helix transcriptional regulator | - |
| QWJ11_RS29325 (DAPPPG215_29660) | 48603..49115 | + | 513 | WP_010215826.1 | transcription termination/antitermination NusG family protein | - |
| QWJ11_RS29330 (DAPPPG215_29665) | 49204..49413 | + | 210 | WP_003344343.1 | hypothetical protein | - |
| QWJ11_RS29335 (DAPPPG215_29675) | 49706..50197 | + | 492 | WP_010215828.1 | hypothetical protein | VF |
| QWJ11_RS29340 (DAPPPG215_29680) | 50234..50707 | + | 474 | WP_032645100.1 | DotD/TraH family lipoprotein | - |
| QWJ11_RS29345 (DAPPPG215_29685) | 50704..51504 | + | 801 | WP_007247253.1 | hypothetical protein | VF |
| QWJ11_RS29350 (DAPPPG215_29690) | 51501..52679 | + | 1179 | WP_059342761.1 | hypothetical protein | VF |
| QWJ11_RS29355 (DAPPPG215_29695) | 52711..52944 | + | 234 | WP_004644386.1 | hypothetical protein | - |
| QWJ11_RS29360 (DAPPPG215_29700) | 52982..53230 | + | 249 | WP_032649099.1 | hypothetical protein | - |
| QWJ11_RS29365 (DAPPPG215_29705) | 53432..53983 | + | 552 | WP_007247250.1 | Cardiolipin synthase B | VF |
| QWJ11_RS29370 (DAPPPG215_29710) | 54020..54265 | + | 246 | WP_005769780.1 | hypothetical protein | - |
| QWJ11_RS29375 (DAPPPG215_29715) | 54294..54581 | + | 288 | WP_003344363.1 | IcmT/TraK family protein | - |
| QWJ11_RS29380 (DAPPPG215_29720) | 54624..59249 | + | 4626 | WP_007247249.1 | DUF5710 domain-containing protein | - |
| QWJ11_RS29385 (DAPPPG215_29725) | 59275..59628 | + | 354 | WP_032649095.1 | conjugal transfer protein | - |
| QWJ11_RS29390 (DAPPPG215_29730) | 59625..60332 | + | 708 | WP_004661192.1 | DotI/IcmL family type IV secretion protein | - |
| QWJ11_RS29395 (DAPPPG215_29735) | 60389..61447 | + | 1059 | WP_007247247.1 | hypothetical protein | VF |
| QWJ11_RS29400 (DAPPPG215_29740) | 61453..62811 | + | 1359 | WP_007247246.1 | conjugal transfer protein TraO | - |
| QWJ11_RS29405 (DAPPPG215_29745) | 62808..63518 | + | 711 | WP_007247245.1 | conjugal transfer protein TraP | - |
| QWJ11_RS29410 (DAPPPG215_29750) | 63527..64069 | + | 543 | WP_003344373.1 | conjugal transfer protein TraQ | - |
| QWJ11_RS29415 (DAPPPG215_29755) | 64145..64540 | + | 396 | WP_007247244.1 | hypothetical protein | - |
| QWJ11_RS29420 (DAPPPG215_29760) | 64621..65232 | + | 612 | WP_032649087.1 | hypothetical protein | - |
| QWJ11_RS29425 (DAPPPG215_29765) | 65207..68263 | + | 3057 | WP_289246066.1 | ATP-binding protein | - |
| QWJ11_RS29430 (DAPPPG215_29770) | 68287..68523 | + | 237 | WP_007247241.1 | hypothetical protein | - |
| QWJ11_RS29435 (DAPPPG215_29775) | 68566..69780 | + | 1215 | WP_010214736.1 | conjugal transfer protein TraW | - |
| QWJ11_RS29440 (DAPPPG215_29780) | 69770..70372 | + | 603 | WP_007247239.1 | conjugal transfer protein TraX | - |
| QWJ11_RS29445 (DAPPPG215_29785) | 70401..72542 | + | 2142 | WP_007247238.1 | DotA/TraY family protein | - |
| QWJ11_RS29450 (DAPPPG215_29790) | 72591..73238 | + | 648 | WP_007247237.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QWJ11_RS29455 (DAPPPG215_29795) | 73331..74533 | + | 1203 | WP_007247236.1 | hypothetical protein | - |
| QWJ11_RS29460 (DAPPPG215_29800) | 74523..74900 | - | 378 | WP_007247235.1 | PIN domain-containing protein | Toxin Detail |
| QWJ11_RS29465 (DAPPPG215_29805) | 74897..75097 | - | 201 | WP_004644067.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| QWJ11_RS29470 (DAPPPG215_29810) | 75190..76275 | + | 1086 | WP_007247234.1 | thioredoxin fold domain-containing protein | - |
| QWJ11_RS29475 (DAPPPG215_29815) | 76262..78550 | + | 2289 | WP_007247233.1 | F-type conjugative transfer protein TrbC | - |
| QWJ11_RS29480 (DAPPPG215_29820) | 78683..79000 | + | 318 | WP_223285740.1 | hypothetical protein | - |
| QWJ11_RS29485 (DAPPPG215_29825) | 79021..79584 | + | 564 | WP_010214078.1 | hypothetical protein | - |
| QWJ11_RS29490 (DAPPPG215_29830) | 79772..80200 | + | 429 | WP_002556024.1 | GntR family transcriptional regulator | - |
| QWJ11_RS29495 (DAPPPG215_29835) | 80279..80506 | + | 228 | WP_010214081.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|