MGE detailed information
MGE type: Genomic_island MGE length: 10417 bp
Accession: NZ_OX442412 Location: 1001985..1012401 Organism: Salmonella enterica subsp. enterica serovar Rissen isolate pure strain Replicon: chromosome
Accession: NZ_OX442412 Location: 1001985..1012401 Organism: Salmonella enterica subsp. enterica serovar Rissen isolate pure strain Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QM550_RS05025 (998548) | 998548..999987 | + | 1440 | WP_033903650.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| QM550_RS05030 (1000105) | 1000105..1000341 | + | 237 | WP_024131167.1 | YebV family protein | - |
| QM550_RS05035 (1000452) | 1000452..1000643 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| QM550_RS05040 (1000662) | 1000662..1001312 | - | 651 | WP_000986168.1 | protein-serine/threonine phosphatase | - |
| QM550_RS05045 (1001536) | 1001536..1001700 | - | 165 | WP_001134851.1 | hypothetical protein | - |
| QM550_RS05050 (1001985) | 1001985..1002707 | - | 723 | WP_000182076.1 | Guanine nucleotide exchange factor sopE2 | VF |
| QM550_RS05055 (1003391) | 1003391..1003786 | + | 396 | WP_000422887.1 | DUF1398 domain-containing protein | - |
| QM550_RS05060 (1004115) | 1004115..1004591 | + | 477 | WP_023138823.1 | hypothetical protein | - |
| QM550_RS05065 (1004746) | 1004746..1004895 | + | 150 | WP_023138824.1 | hypothetical protein | - |
| QM550_RS05070 (1005007) | 1005007..1005465 | - | 459 | WP_001195655.1 | hypothetical protein | - |
| QM550_RS05075 (1005791) | 1005791..1006938 | + | 1148 | WP_112324583.1 | IS3 family transposase ISEhe3 | Transposase |
| QM550_RS05080 (1006969) | 1006969..1007526 | - | 558 | WP_000179886.1 | hypothetical protein | - |
| QM550_RS05085 (1007630) | 1007630..1007839 | - | 210 | WP_023137948.1 | hypothetical protein | - |
| QM550_RS05090 (1007869) | 1007869..1008168 | - | 300 | WP_000775225.1 | hypothetical protein | - |
| QM550_RS05095 (1008347) | 1008347..1008658 | + | 312 | WP_000558157.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| QM550_RS05100 (1008655) | 1008655..1009074 | + | 420 | WP_000561389.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| QM550_RS05105 (1009327) | 1009327..1009979 | + | 653 | Protein_1003 | glycosyltransferase | - |
| QM550_RS05110 (1010215) | 1010215..1010634 | - | 420 | WP_023137951.1 | GNAT family N-acetyltransferase | - |
| QM550_RS05115 (1011004) | 1011004..1011273 | + | 270 | WP_077908593.1 | hypothetical protein | - |
| QM550_RS05120 (1011439) | 1011439..1011579 | + | 141 | WP_001576018.1 | hypothetical protein | - |
| QM550_RS05125 (1011725) | 1011725..1012266 | - | 542 | Protein_1007 | IS256 family transposase ISEc39 | Transposase |
| QM550_RS05130 (1012286) | 1012286..1012378 | - | 93 | WP_231923105.1 | IS256 family transposase IS285 | Transposase |
| QM550_RS05135 (1012408) | 1012408..1014828 | - | 2421 | WP_024149295.1 | type III secretion system effector SspH3 | - |
| QM550_RS05140 (1015001) | 1015001..1015084 | - | 84 | Protein_1010 | phage tail protein | - |
| QM550_RS05145 (1015096) | 1015096..1015443 | + | 348 | Protein_1011 | tyrosine-type recombinase/integrase | - |
| QM550_RS05150 (1015817) | 1015817..1016170 | - | 354 | WP_000722368.1 | YebY family protein | - |
| QM550_RS05155 (1016187) | 1016187..1017062 | - | 876 | WP_023137953.1 | copper homeostasis membrane protein CopD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|