MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 103859 bp
Accession: NZ_OX352831 Location: 682299..786157 Organism: Streptococcus suis isolate 861160_dxerD_hsdSE Replicon: chromosome
Accession: NZ_OX352831 Location: 682299..786157 Organism: Streptococcus suis isolate 861160_dxerD_hsdSE Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QNH78_RS03475 | 677876..679039 | - | 1164 | WP_156688692.1 | IS110 family transposase | - |
| QNH78_RS03480 | 679590..679874 | + | 285 | Protein_649 | ISL3 family transposase | - |
| QNH78_RS03485 | 680322..680960 | - | 639 | WP_011922101.1 | MBL fold metallo-hydrolase | - |
| QNH78_RS03490 | 681077..683536 | + | 2460 | WP_232049080.1 | bifunctional DnaQ family exonuclease/ATP-dependent helicase | - |
| QNH78_RS03495 | 683696..684772 | + | 1077 | WP_074390225.1 | glutamate 5-kinase | - |
| QNH78_RS03500 | 684837..686075 | + | 1239 | WP_011922104.1 | glutamate-5-semialdehyde dehydrogenase | - |
| QNH78_RS03505 | 686085..686870 | + | 786 | WP_011922105.1 | pyrroline-5-carboxylate reductase | - |
| QNH78_RS03510 | 686893..687297 | - | 405 | WP_011922106.1 | TetR/AcrR family transcriptional regulator | - |
| QNH78_RS03515 | 687424..688275 | + | 852 | WP_002938910.1 | DegV family protein | - |
| QNH78_RS03520 | 688374..689633 | - | 1260 | WP_011922108.1 | PLP-dependent aminotransferase family protein | - |
| QNH78_RS03525 | 689756..690490 | + | 735 | WP_012775019.1 | peroxide stress protein YaaA | - |
| QNH78_RS03530 | 690595..692040 | + | 1446 | WP_012775020.1 | Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU | VF |
| QNH78_RS03535 | 692058..692747 | + | 690 | WP_011922111.1 | putative capsular polysaccharide biosynthesis protein YwqC | VF |
| QNH78_RS03540 | 692757..693434 | + | 678 | WP_012775429.1 | Tyrosine-protein kinase CpsD | VF |
| QNH78_RS03545 | 693473..694204 | + | 732 | WP_002936359.1 | Tyrosine-protein phosphatase CpsB | VF |
| QNH78_RS03550 | 694229..695608 | + | 1380 | WP_002936357.1 | hypothetical protein | VF |
| QNH78_RS03555 | 695643..696812 | + | 1170 | Protein_664 | glycosyltransferase family 1 protein | - |
| QNH78_RS03560 | 696816..697973 | + | 1158 | WP_002936352.1 | glycosyltransferase family 4 protein | - |
| QNH78_RS03565 | 698362..699732 | + | 1371 | WP_002936350.1 | glycosyltransferase family 2 protein | - |
| QNH78_RS03570 | 699800..700999 | + | 1200 | WP_009909570.1 | oligosaccharide repeat unit polymerase Wzy | - |
| QNH78_RS03575 | 701138..702136 | + | 999 | WP_002936347.1 | hypothetical protein | VF |
| QNH78_RS03580 | 702129..703133 | + | 1005 | WP_011922118.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| QNH78_RS03585 | 703173..703484 | + | 312 | WP_009909574.1 | hypothetical protein | - |
| QNH78_RS03590 | 703953..704192 | + | 240 | WP_226961159.1 | hypothetical protein | - |
| QNH78_RS03595 | 704360..704539 | + | 180 | Protein_672 | acylneuraminate cytidylyltransferase | - |
| QNH78_RS03600 | 704976..705947 | + | 972 | WP_011922741.1 | hypothetical protein | VF |
| QNH78_RS03605 | 705956..707362 | + | 1407 | WP_002936324.1 | hypothetical protein | VF |
| QNH78_RS03610 | 707885..708901 | + | 1017 | WP_002936321.1 | N,N'-diacetyllegionaminic acid synthase | VF |
| QNH78_RS03615 | 708913..710046 | + | 1134 | WP_009909585.1 | Polysialic acid biosynthesis protein P7 | VF |
| QNH78_RS03620 | 710036..710686 | + | 651 | WP_011922122.1 | Putative acetyltransferase EpsM | VF |
| QNH78_RS03625 | 710695..711927 | + | 1233 | WP_012775023.1 | N-acylneuraminate cytidylyltransferase | VF |
| QNH78_RS03630 | 712124..712997 | + | 874 | Protein_679 | IS5 family transposase ISSth7 | Transposase |
| QNH78_RS03635 | 713247..714094 | + | 848 | WP_087892711.1 | IS630 family transposase | - |
| QNH78_RS03640 | 714131..714316 | + | 186 | WP_014635926.1 | hypothetical protein | - |
| QNH78_RS03645 | 714297..714584 | + | 288 | WP_011922127.1 | IS66 family transposase ISDeal1 | Transposase |
| QNH78_RS03650 | 714701..714907 | + | 207 | WP_002936301.1 | IS66 family transposase ISBthe6 | Transposase |
| QNH78_RS03655 | 714861..716193 | + | 1333 | Protein_684 | IS66 family transposase ISSwo2 | Transposase |
| QNH78_RS03660 | 716328..717218 | + | 891 | Protein_685 | IS30 family transposase ISSpn8 | Transposase |
| QNH78_RS03665 | 717578..718491 | - | 914 | Protein_686 | tyrosine-type recombinase/integrase | - |
| QNH78_RS03670 | 718586..718840 | + | 255 | WP_014636268.1 | hypothetical protein | - |
| QNH78_RS03675 | 718874..719239 | + | 366 | WP_228381327.1 | D-alanine--D-alanine ligase | - |
| QNH78_RS03680 | 719577..721934 | - | 2358 | WP_012775024.1 | hypothetical protein | - |
| QNH78_RS03685 | 722151..723431 | + | 1281 | WP_012775025.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| QNH78_RS03690 | 723440..723931 | + | 492 | WP_011922141.1 | shikimate kinase | - |
| QNH78_RS03695 | 723922..724749 | + | 828 | WP_009909609.1 | prephenate dehydratase | - |
| QNH78_RS03700 | 724761..726086 | + | 1326 | WP_011922144.1 | LCP family protein | - |
| QNH78_RS03705 | 726152..726550 | + | 399 | Protein_694 | TRAM domain-containing protein | - |
| QNH78_RS03710 | 726801..726974 | + | 174 | WP_032510356.1 | hypothetical protein | - |
| QNH78_RS03715 | 726971..727789 | + | 819 | WP_074390218.1 | replication initiator protein A | - |
| QNH78_RS03720 | 727938..729293 | + | 1356 | WP_074400600.1 | DNA (cytosine-5-)-methyltransferase | - |
| QNH78_RS03725 | 729277..729705 | + | 429 | WP_074400601.1 | hypothetical protein | - |
| QNH78_RS03730 | 729716..730105 | + | 390 | WP_074389343.1 | hypothetical protein | - |
| QNH78_RS03735 | 730108..730341 | + | 234 | WP_001005708.1 | hypothetical protein | - |
| QNH78_RS03740 | 730344..730928 | + | 585 | WP_074389344.1 | CPBP family intramembrane metalloprotease | - |
| QNH78_RS03745 | 731005..731493 | + | 489 | WP_074400602.1 | hypothetical protein | - |
| QNH78_RS03750 | 731493..733310 | + | 1818 | Protein_703 | type IV secretory system conjugative DNA transfer family protein | - |
| QNH78_RS03755 | 733328..733570 | + | 243 | WP_024405437.1 | hypothetical protein | - |
| QNH78_RS03760 | 733589..734443 | + | 855 | WP_024405438.1 | conjugal transfer protein TrbL | - |
| QNH78_RS03765 | 734505..734858 | + | 354 | WP_001097579.1 | PrgI family protein | - |
| QNH78_RS03770 | 734815..737166 | + | 2352 | WP_029750526.1 | ATPase AAA | - |
| QNH78_RS03775 | 737168..739969 | + | 2802 | WP_074400605.1 | phage tail tip lysozyme | - |
| QNH78_RS03780 | 740032..740877 | - | 846 | WP_074390209.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| QNH78_RS03785 | 740874..741464 | - | 591 | WP_000037239.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| QNH78_RS03790 | 741742..746637 | + | 4896 | WP_074390207.1 | hypothetical protein | VF |
| QNH78_RS03795 | 746638..746829 | + | 192 | WP_074390206.1 | calcium-binding protein | - |
| QNH78_RS03800 | 746813..747364 | + | 552 | WP_074390205.1 | hypothetical protein | - |
| QNH78_RS03805 | 747413..754237 | + | 6825 | WP_074400606.1 | SNF2-related protein | - |
| QNH78_RS03810 | 754308..754607 | + | 300 | WP_074389384.1 | DUF5962 family protein | - |
| QNH78_RS03815 | 754621..754917 | + | 297 | WP_074400607.1 | DUF5966 family protein | - |
| QNH78_RS03820 | 755257..755430 | + | 174 | WP_012775117.1 | type A2 lanthipeptide | - |
| QNH78_RS03825 | 755514..758009 | + | 2496 | WP_232049082.1 | DUF4135 domain-containing protein | - |
| QNH78_RS03830 | 758029..760098 | + | 2070 | WP_232049084.1 | cysteine peptidase family C39 domain-containing protein | - |
| QNH78_RS03835 | 760070..760984 | + | 915 | WP_074400609.1 | Bacitracin transport ATP-binding protein BcrA | VF |
| QNH78_RS03840 | 760962..761681 | + | 720 | WP_074400610.1 | ABC transporter permease | - |
| QNH78_RS03845 | 761691..762386 | + | 696 | WP_074400611.1 | ABC transporter permease | - |
| QNH78_RS03850 | 762908..763891 | + | 984 | WP_232049085.1 | hypothetical protein | - |
| QNH78_RS03855 | 763869..764468 | + | 600 | WP_024381910.1 | response regulator transcription factor | - |
| QNH78_RS03860 | 766060..766698 | + | 639 | WP_074400613.1 | peptidylprolyl isomerase | - |
| QNH78_RS03865 | 766738..767814 | + | 1077 | WP_074400614.1 | toprim domain-containing protein | - |
| QNH78_RS03870 | 767868..768095 | + | 228 | WP_024418314.1 | DUF5965 family protein | - |
| QNH78_RS03875 | 768092..768481 | + | 390 | WP_024405544.1 | DUF5945 family protein | - |
| QNH78_RS03880 | 768531..768821 | + | 291 | WP_024405543.1 | hypothetical protein | - |
| QNH78_RS03885 | 768891..769367 | + | 477 | WP_024405542.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| QNH78_RS03890 | 769367..770143 | + | 777 | WP_024405541.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| QNH78_RS03895 | 770140..772200 | + | 2061 | WP_074400615.1 | AAA family ATPase | - |
| QNH78_RS03900 | 772187..774001 | + | 1815 | WP_024405539.1 | ATP-dependent helicase | - |
| QNH78_RS03905 | 774096..775259 | - | 1164 | WP_024405538.1 | ATP-binding protein | - |
| QNH78_RS03910 | 775629..775988 | + | 360 | WP_024405537.1 | SAG1252 family conjugative relaxosome accessory protein | - |
| QNH78_RS03915 | 775998..776363 | + | 366 | WP_024405536.1 | plasmid mobilization relaxosome protein MobC | - |
| QNH78_RS03920 | 776350..778212 | + | 1863 | WP_074400616.1 | SAG1250 family conjugative relaxase | - |
| QNH78_RS03925 | 778297..779151 | - | 855 | WP_024405534.1 | helix-turn-helix transcriptional regulator | - |
| QNH78_RS03930 | 779872..782703 | + | 2832 | WP_173018630.1 | type 2 lanthipeptide synthetase LanM | - |
| QNH78_RS03935 | 782801..783007 | + | 207 | WP_024405531.1 | hypothetical protein | VF |
| QNH78_RS03940 | 783020..783256 | + | 237 | WP_024405530.1 | hypothetical protein | VF |
| QNH78_RS03945 | 783523..784260 | + | 738 | WP_024405529.1 | flavodoxin family protein | - |
| QNH78_RS03950 | 784250..786361 | + | 2112 | WP_024405528.1 | peptidase domain-containing ABC transporter | - |
| QNH78_RS03955 | 786374..786760 | + | 387 | WP_024405527.1 | hypothetical protein | - |
| QNH78_RS03960 | 786814..788121 | + | 1308 | WP_024405526.1 | S8 family serine peptidase | - |
| QNH78_RS03965 | 788758..788982 | + | 225 | WP_024405525.1 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|