MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 93244 bp
Accession: NZ_OX352322 Location: 773552..866795 Organism: Pseudomonas sp. MM223 Replicon: chromosome
Accession: NZ_OX352322 Location: 773552..866795 Organism: Pseudomonas sp. MM223 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ONI07_RS03440 (DBADOPDK_00701) | 769448..770188 | + | 741 | WP_264361659.1 | peptidoglycan editing factor PgeF | - |
| ONI07_RS03445 (DBADOPDK_00702) | 770377..772941 | + | 2565 | WP_264361660.1 | ATP-dependent chaperone ClpB | - |
| ONI07_RS03465 (DBADOPDK_00706) | 773934..775187 | - | 1254 | WP_103463353.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| ONI07_RS03470 (DBADOPDK_00708) | 775184..777067 | - | 1884 | Protein_662 | TraI domain-containing protein | - |
| ONI07_RS03475 (DBADOPDK_00709) | 777176..777781 | - | 606 | WP_146257911.1 | hypothetical protein | - |
| ONI07_RS03480 (DBADOPDK_00710) | 777900..778253 | - | 354 | WP_103463351.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| ONI07_RS03485 (DBADOPDK_00711) | 778262..778540 | - | 279 | WP_009402065.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| ONI07_RS03490 (DBADOPDK_00712) | 778653..779006 | + | 354 | WP_103463350.1 | hypothetical protein | - |
| ONI07_RS03495 (DBADOPDK_00713) | 779047..780573 | - | 1527 | WP_103463349.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| ONI07_RS03500 (DBADOPDK_00714) | 780570..780926 | - | 357 | WP_103463348.1 | hypothetical protein | - |
| ONI07_RS03505 (DBADOPDK_00715) | 780929..782290 | - | 1362 | WP_023662955.1 | integrating conjugative element protein | - |
| ONI07_RS03510 (DBADOPDK_00716) | 782310..783245 | - | 936 | WP_023662956.1 | TIGR03756 family integrating conjugative element protein | - |
| ONI07_RS03515 (DBADOPDK_00717) | 783245..783664 | - | 420 | WP_181005345.1 | TIGR03757 family integrating conjugative element protein | - |
| ONI07_RS03520 (DBADOPDK_00718) | 783858..784139 | + | 282 | WP_031325674.1 | hypothetical protein | - |
| ONI07_RS03525 (DBADOPDK_00719) | 784211..784432 | + | 222 | WP_060495291.1 | hypothetical protein | - |
| ONI07_RS03530 (DBADOPDK_00721) | 784749..785084 | - | 336 | WP_103463347.1 | hypothetical protein | - |
| ONI07_RS03535 (DBADOPDK_00722) | 785093..785434 | - | 342 | WP_264363510.1 | hypothetical protein | - |
| ONI07_RS03540 | 785482..785736 | - | 255 | Protein_676 | thioredoxin domain-containing protein | - |
| ONI07_RS03545 (DBADOPDK_00723) | 785729..786034 | - | 306 | WP_103463345.1 | hypothetical protein | - |
| ONI07_RS03550 (DBADOPDK_00724) | 786031..789024 | - | 2994 | WP_232555189.1 | conjugative transfer ATPase | - |
| ONI07_RS03555 (DBADOPDK_00725) | 789024..789473 | - | 450 | WP_023660752.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| ONI07_RS03560 (DBADOPDK_00726) | 789451..790950 | - | 1500 | WP_264361663.1 | TIGR03752 family integrating conjugative element protein | - |
| ONI07_RS03565 (DBADOPDK_00727) | 790931..791824 | - | 894 | WP_023660750.1 | TIGR03749 family integrating conjugative element protein | - |
| ONI07_RS03570 (DBADOPDK_00728) | 791821..792471 | - | 651 | WP_023660749.1 | TIGR03746 family integrating conjugative element protein | - |
| ONI07_RS03575 | 792480..792743 | - | 264 | WP_264387375.1 | TIGR03750 family conjugal transfer protein | - |
| ONI07_RS03580 (DBADOPDK_00729) | 792659..792862 | - | 204 | WP_264387376.1 | TIGR03750 family conjugal transfer protein | - |
| ONI07_RS03585 (DBADOPDK_00730) | 792876..793181 | - | 306 | WP_225624753.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| ONI07_RS03590 (DBADOPDK_00731) | 793242..793481 | - | 240 | WP_031324281.1 | TIGR03758 family integrating conjugative element protein | - |
| ONI07_RS03595 (DBADOPDK_00732) | 793478..793795 | - | 318 | WP_028690570.1 | RAQPRD family integrative conjugative element protein | - |
| ONI07_RS03600 (DBADOPDK_00734) | 794316..794639 | - | 324 | WP_023660744.1 | hypothetical protein | - |
| ONI07_RS03605 (DBADOPDK_00735) | 794658..796127 | - | 1470 | WP_023660743.1 | UvrD-helicase domain-containing protein | - |
| ONI07_RS03610 (DBADOPDK_00736) | 796139..796888 | - | 750 | WP_023660742.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| ONI07_RS03615 (DBADOPDK_00737) | 796899..799115 | - | 2217 | WP_023660741.1 | type IV conjugative transfer system coupling protein TraD | - |
| ONI07_RS03620 (DBADOPDK_00738) | 799117..799338 | - | 222 | WP_009402022.1 | hypothetical protein | - |
| ONI07_RS03625 (DBADOPDK_00739) | 799374..799850 | - | 477 | WP_031324279.1 | integrating conjugative element protein | - |
| ONI07_RS03630 (DBADOPDK_00740) | 799901..800461 | - | 561 | WP_031324278.1 | hypothetical protein | VF |
| ONI07_RS03635 (DBADOPDK_00741) | 800446..801204 | - | 759 | WP_055985437.1 | TIGR03759 family integrating conjugative element protein | - |
| ONI07_RS03640 | 801215..801914 | - | 700 | Protein_696 | methyl-accepting chemotaxis protein | - |
| ONI07_RS03645 | 802851..803096 | - | 246 | Protein_697 | DUF4113 domain-containing protein | - |
| ONI07_RS03650 | 803330..803785 | + | 456 | WP_023660738.1 | glyoxalase superfamily protein | - |
| ONI07_RS03655 (DBADOPDK_00744) | 804058..805337 | - | 1280 | Protein_699 | HD-GYP domain-containing protein | - |
| ONI07_RS03660 (DBADOPDK_00745) | 805455..805835 | - | 381 | WP_001054412.1 | hypothetical protein | - |
| ONI07_RS03665 (DBADOPDK_00746) | 805832..806158 | - | 327 | WP_000091614.1 | hypothetical protein | - |
| ONI07_RS03670 (DBADOPDK_00747) | 806182..806517 | - | 336 | WP_000741275.1 | hypothetical protein | - |
| ONI07_RS03675 (DBADOPDK_00748) | 806532..806867 | - | 336 | WP_001172026.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| ONI07_RS03680 (DBADOPDK_00749) | 806848..807225 | - | 378 | WP_003151133.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ONI07_RS03685 (DBADOPDK_00750) | 807417..808019 | + | 603 | WP_010465829.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| ONI07_RS03690 (DBADOPDK_00752) | 808003..811033 | + | 3031 | Protein_706 | Tn3 family transposase ISPsy42 | Transposase |
| ONI07_RS03695 (DBADOPDK_00753) | 811700..812557 | - | 858 | WP_264361666.1 | LysR family transcriptional regulator | - |
| ONI07_RS03700 (DBADOPDK_00754) | 812554..813561 | - | 1008 | WP_086230472.1 | phosphonate dehydrogenase | - |
| ONI07_RS03705 | 813587..813769 | - | 183 | WP_233752592.1 | NAD(P)-dependent oxidoreductase | - |
| ONI07_RS03710 | 813907..814281 | - | 375 | Protein_710 | hydroxyacid dehydrogenase | - |
| ONI07_RS03715 (DBADOPDK_00756) | 814278..815102 | - | 825 | WP_233752591.1 | Phosphate-import ATP-binding protein PhnC | VF |
| ONI07_RS03720 (DBADOPDK_00757) | 815136..815984 | - | 849 | WP_013743895.1 | phosphonate ABC transporter, permease protein PhnE | - |
| ONI07_RS03725 (DBADOPDK_00758) | 816109..817005 | - | 897 | WP_264361667.1 | phosphate/phosphite/phosphonate ABC transporter substrate-binding protein | - |
| ONI07_RS03730 (DBADOPDK_00759) | 817030..817890 | - | 861 | WP_003118418.1 | phytanoyl-CoA dioxygenase family protein | - |
| ONI07_RS03735 (DBADOPDK_00760) | 818835..820340 | + | 1506 | WP_023121726.1 | methyltransferase domain-containing protein | - |
| ONI07_RS03740 (DBADOPDK_00761) | 820455..823370 | + | 2916 | WP_003049965.1 | Tn3 family transposase TnpA_IS1071 | Transposase |
| ONI07_RS03745 (DBADOPDK_00762) | 823533..823820 | + | 288 | WP_003118420.1 | hypothetical protein | - |
| ONI07_RS03750 | 824024..824506 | + | 483 | WP_264387377.1 | hypothetical protein | - |
| ONI07_RS03755 (DBADOPDK_00763) | 824520..826769 | - | 2250 | WP_103463318.1 | DEAD/DEAH box helicase | - |
| ONI07_RS03760 (DBADOPDK_00764) | 826867..828306 | - | 1440 | WP_103463317.1 | DUF6094 domain-containing protein | - |
| ONI07_RS03765 (DBADOPDK_00765) | 828335..828940 | - | 606 | WP_103463462.1 | hypothetical protein | - |
| ONI07_RS03770 (DBADOPDK_00766) | 829003..829257 | - | 255 | WP_023660733.1 | hypothetical protein | - |
| ONI07_RS03775 (DBADOPDK_00767) | 829350..829955 | - | 606 | WP_103463316.1 | DUF3275 family protein | - |
| ONI07_RS03780 (DBADOPDK_00768) | 830018..830296 | - | 279 | WP_264361671.1 | hypothetical protein | - |
| ONI07_RS03785 (DBADOPDK_00769) | 830498..830818 | - | 321 | WP_103463314.1 | hypothetical protein | - |
| ONI07_RS03790 (DBADOPDK_00770) | 831128..831478 | - | 351 | WP_103463313.1 | hypothetical protein | - |
| ONI07_RS03795 | 832437..832841 | - | 405 | Protein_727 | STY4534 family ICE replication protein | - |
| ONI07_RS03800 (DBADOPDK_00774) | 833540..833890 | - | 351 | WP_181005341.1 | hypothetical protein | - |
| ONI07_RS03805 (DBADOPDK_00775) | 833997..834353 | - | 357 | WP_103463310.1 | hypothetical protein | - |
| ONI07_RS03810 (DBADOPDK_00776) | 835242..835682 | - | 441 | WP_023660721.1 | type IV pilus biogenesis protein PilM | - |
| ONI07_RS03815 (DBADOPDK_00777) | 835781..836434 | - | 654 | WP_023660720.1 | hypothetical protein | - |
| ONI07_RS03820 (DBADOPDK_00778) | 836563..837801 | - | 1239 | WP_225624754.1 | hypothetical protein | VF |
| ONI07_RS03825 | 837839..838779 | - | 941 | Protein_733 | Twitching mobility protein | VF |
| ONI07_RS03830 (DBADOPDK_00782) | 838791..839306 | - | 516 | WP_023660717.1 | hypothetical protein | VF |
| ONI07_RS03835 (DBADOPDK_00783) | 839330..840496 | - | 1167 | WP_023660716.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| ONI07_RS03840 (DBADOPDK_00784) | 840489..842008 | - | 1520 | Protein_736 | Type II secretion system protein E | VF |
| ONI07_RS03845 (DBADOPDK_00785) | 842056..842289 | - | 234 | WP_264387378.1 | hypothetical protein | - |
| ONI07_RS03850 (DBADOPDK_00787) | 842604..843932 | - | 1329 | WP_264387379.1 | type 4b pilus protein PilO2 | - |
| ONI07_RS03855 (DBADOPDK_00788) | 843943..845763 | - | 1821 | WP_023660712.1 | hypothetical protein | VF |
| ONI07_RS03860 (DBADOPDK_00789) | 845760..846893 | - | 1134 | WP_031324267.1 | hypothetical protein | VF |
| ONI07_RS03865 (DBADOPDK_00790) | 846992..847744 | + | 753 | WP_103463309.1 | hypothetical protein | - |
| ONI07_RS03870 (DBADOPDK_00791) | 847734..849701 | - | 1968 | WP_103463308.1 | DEAD/DEAH box helicase | - |
| ONI07_RS03875 (DBADOPDK_00792) | 849698..850000 | - | 303 | WP_232555043.1 | hypothetical protein | - |
| ONI07_RS03880 (DBADOPDK_00793) | 850138..852048 | - | 1911 | WP_103463306.1 | DNA topoisomerase | - |
| ONI07_RS03885 (DBADOPDK_00794) | 852169..852366 | - | 198 | WP_023660706.1 | CrpP family ICE-associated protein | - |
| ONI07_RS03890 (DBADOPDK_00795) | 852784..853170 | - | 387 | WP_103463305.1 | hypothetical protein | - |
| ONI07_RS03895 (DBADOPDK_00796) | 853369..853881 | - | 513 | WP_103463304.1 | single-stranded DNA-binding protein | - |
| ONI07_RS03900 (DBADOPDK_00797) | 853896..854441 | - | 546 | WP_023660702.1 | DUF3158 family protein | - |
| ONI07_RS03905 (DBADOPDK_00798) | 854438..855163 | - | 726 | WP_023660701.1 | TIGR03761 family integrating conjugative element protein | - |
| ONI07_RS03910 (DBADOPDK_00799) | 855997..856719 | - | 723 | WP_055985449.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| ONI07_RS03915 (DBADOPDK_00800) | 856712..858014 | - | 1303 | Protein_751 | STY4528 family pathogenicity island replication protein | - |
| ONI07_RS03920 (DBADOPDK_00801) | 858011..858706 | - | 696 | WP_023660699.1 | DUF2857 domain-containing protein | - |
| ONI07_RS03925 (DBADOPDK_00802) | 858739..860445 | - | 1707 | WP_023660698.1 | ParB family protein | - |
| ONI07_RS03930 (DBADOPDK_00803) | 860447..860791 | - | 345 | WP_023660697.1 | Arc family DNA-binding protein | - |
| ONI07_RS03935 (DBADOPDK_00804) | 860802..861806 | - | 1005 | WP_023660696.1 | nucleoid-associated protein YejK | - |
| ONI07_RS03940 (DBADOPDK_00805) | 861806..862039 | - | 234 | WP_023660695.1 | hypothetical protein | - |
| ONI07_RS03945 (DBADOPDK_00806) | 862032..862559 | - | 528 | WP_023660694.1 | hypothetical protein | - |
| ONI07_RS03950 (DBADOPDK_00808) | 862734..864081 | - | 1348 | Protein_758 | replicative DNA helicase | - |
| ONI07_RS03955 (DBADOPDK_00810) | 864078..864776 | - | 699 | WP_031324260.1 | DUF2786 domain-containing protein | - |
| ONI07_RS03960 (DBADOPDK_00811) | 864776..865018 | - | 243 | WP_264361675.1 | hypothetical protein | - |
| ONI07_RS03965 (DBADOPDK_00812) | 865015..865614 | - | 600 | WP_264361676.1 | hypothetical protein | - |
| ONI07_RS03970 | 865759..866645 | - | 887 | Protein_762 | ParA family protein | - |
| ONI07_RS03975 (DBADOPDK_00816) | 866962..868257 | - | 1296 | WP_264361677.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| ONI07_RS03980 (DBADOPDK_00817) | 868342..868515 | - | 174 | WP_008091951.1 | DUF3094 domain-containing protein | - |
| ONI07_RS03985 (DBADOPDK_00818) | 868648..869277 | - | 630 | WP_019473259.1 | DUF1780 domain-containing protein | - |
| ONI07_RS03990 (DBADOPDK_00819) | 869333..869764 | - | 432 | WP_264361678.1 | hypothetical protein | - |
| ONI07_RS03995 (DBADOPDK_00820) | 869851..870570 | + | 720 | WP_264361679.1 | energy-coupling factor ABC transporter permease | - |
| ONI07_RS04000 (DBADOPDK_00821) | 870772..870972 | - | 201 | WP_016501579.1 | DNA gyrase inhibitor YacG | - |
| ONI07_RS04005 (DBADOPDK_00822) | 870969..871592 | - | 624 | WP_264361680.1 | dephospho-CoA kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|