MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 111976 bp
Accession: NZ_OX344719 Location: 1044707..1156682 Organism: Staphylococcus aureus strain ST20190863 isolate ST20190863 Replicon: chromosome
Accession: NZ_OX344719 Location: 1044707..1156682 Organism: Staphylococcus aureus strain ST20190863 isolate ST20190863 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OOL12_RS05225 (1040422) | 1040422..1041009 | - | 588 | WP_000152734.1 | DUF1405 domain-containing protein | - |
| OOL12_RS05230 (1040999) | 1040999..1041574 | - | 576 | WP_000004947.1 | YpiB family protein | - |
| OOL12_RS05235 (1041588) | 1041588..1042832 | - | 1245 | WP_000389524.1 | hypothetical protein | - |
| OOL12_RS05240 (1042839) | 1042839..1044137 | - | 1299 | WP_000245895.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| OOL12_RS05245 (1044147) | 1044147..1045211 | - | 1065 | WP_000776323.1 | 3-dehydroquinate synthase | - |
| OOL12_RS05250 (1045237) | 1045237..1046403 | - | 1167 | WP_001269929.1 | chorismate synthase | - |
| OOL12_RS05255 (1046789) | 1046789..1046989 | - | 201 | WP_000789522.1 | hypothetical protein | - |
| OOL12_RS05260 (1047198) | 1047198..1047647 | - | 450 | WP_000442480.1 | nucleoside-diphosphate kinase | - |
| OOL12_RS05265 (1047739) | 1047739..1048698 | - | 960 | WP_001096471.1 | polyprenyl synthetase family protein | - |
| OOL12_RS05270 (1048700) | 1048700..1049425 | - | 726 | WP_000774684.1 | demethylmenaquinone methyltransferase | - |
| OOL12_RS05275 (1049428) | 1049428..1050000 | - | 573 | WP_000450553.1 | heptaprenyl diphosphate synthase component 1 | - |
| OOL12_RS05280 (1050431) | 1050431..1050703 | - | 273 | WP_001043863.1 | HU family DNA-binding protein | - |
| OOL12_RS05285 (1050874) | 1050874..1051872 | - | 999 | WP_000161738.1 | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | - |
| OOL12_RS05290 (1051889) | 1051889..1053199 | - | 1311 | WP_000165530.1 | GTPase Der | VF |
| OOL12_RS05295 (1053421) | 1053421..1054596 | - | 1176 | WP_000133954.1 | 30S ribosomal protein S1 | - |
| OOL12_RS05300 (1054853) | 1054853..1055044 | - | 192 | WP_001789944.1 | hypothetical protein | - |
| OOL12_RS05305 (1055161) | 1055161..1055277 | - | 117 | WP_001789945.1 | hypothetical protein | - |
| OOL12_RS05310 (1055308) | 1055308..1055967 | - | 660 | WP_000644391.1 | (d)CMP kinase | - |
| OOL12_RS05315 (1056044) | 1056044..1057012 | + | 969 | WP_000681756.1 | asparaginase | - |
| OOL12_RS05320 (1057127) | 1057127..1058113 | - | 987 | WP_001174260.1 | bacillithiol disulfide reductase YpdA | - |
| OOL12_RS05325 (1058274) | 1058274..1058390 | - | 117 | WP_001789943.1 | hypothetical protein | - |
| OOL12_RS05330 (1058515) | 1058515..1059975 | - | 1461 | WP_000069282.1 | Elastin-binding protein EbpS | VF |
| OOL12_RS05335 (1060128) | 1060128..1061507 | - | 1380 | WP_000902119.1 | ATP-dependent DNA helicase RecQ | - |
| OOL12_RS05340 (1061497) | 1061497..1062450 | - | 954 | WP_001163801.1 | helix-turn-helix domain-containing protein | - |
| OOL12_RS05345 (1062558) | 1062558..1062806 | + | 249 | WP_001151997.1 | ferredoxin | - |
| OOL12_RS05350 (1062912) | 1062912..1063457 | - | 546 | WP_001186912.1 | ECF transporter S component | - |
| OOL12_RS05355 (1063736) | 1063736..1063855 | - | 120 | WP_001789947.1 | hypothetical protein | - |
| OOL12_RS05360 (1064054) | 1064054..1064968 | - | 915 | WP_000913219.1 | DUF1672 domain-containing protein | - |
| OOL12_RS05365 (1064983) | 1064983..1065189 | - | 207 | WP_001033757.1 | hypothetical protein | - |
| OOL12_RS05370 (1065182) | 1065182..1066120 | - | 939 | WP_000472936.1 | DUF1672 domain-containing protein | - |
| OOL12_RS05375 (1066178) | 1066178..1067095 | - | 918 | WP_000476873.1 | DUF1672 domain-containing protein | - |
| OOL12_RS05380 (1067186) | 1067186..1067401 | - | 216 | WP_170267452.1 | hypothetical protein | - |
| OOL12_RS05385 (1067777) | 1067777..1068613 | - | 837 | WP_000675478.1 | hypothetical protein | - |
| OOL12_RS05390 (1069229) | 1069229..1070683 | - | 1455 | WP_000909210.1 | N-acetylmuramoyl-L-alanine amidase | - |
| OOL12_RS05395 (1070694) | 1070694..1070996 | - | 303 | WP_000339144.1 | phage holin | - |
| OOL12_RS05400 (1071132) | 1071132..1071431 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| OOL12_RS05405 (1071477) | 1071477..1071641 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| OOL12_RS05410 (1071634) | 1071634..1072023 | - | 390 | WP_264717386.1 | DUF2977 domain-containing protein | - |
| OOL12_RS05415 (1072023) | 1072023..1073489 | - | 1467 | WP_000067127.1 | BppU family phage baseplate upper protein | - |
| OOL12_RS05420 (1073489) | 1073489..1075399 | - | 1911 | WP_000429558.1 | minor structural protein | - |
| OOL12_RS05425 (1075415) | 1075415..1075705 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| OOL12_RS05430 (1075705) | 1075705..1077288 | - | 1584 | WP_000384472.1 | prophage endopeptidase tail family protein | - |
| OOL12_RS05435 (1077297) | 1077297..1078121 | - | 825 | WP_001190527.1 | phage tail family protein | - |
| OOL12_RS05440 (1078121) | 1078121..1084321 | - | 6201 | WP_001003424.1 | phage tail tape measure protein | - |
| OOL12_RS05445 (1084335) | 1084335..1084493 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| OOL12_RS05450 (1084535) | 1084535..1084885 | - | 351 | WP_000589167.1 | hypothetical protein | - |
| OOL12_RS05455 (1085129) | 1085129..1085617 | - | 489 | WP_176318786.1 | IS30 family transposase ISSau5 | Transposase |
| OOL12_RS05460 (1085646) | 1085646..1086149 | - | 504 | WP_000746371.1 | IS30 family transposase ISSau5 | Transposase |
| OOL12_RS05465 (1086258) | 1086258..1086599 | - | 342 | WP_001255377.1 | lipoprotein | - |
| OOL12_RS05470 (1086655) | 1086655..1087245 | - | 591 | WP_000810443.1 | hypothetical protein | - |
| OOL12_RS05475 (1087252) | 1087252..1088298 | - | 1047 | WP_000247469.1 | hypothetical protein | VF |
| OOL12_RS05480 (1088288) | 1088288..1090135 | - | 1848 | WP_000681143.1 | membrane protein | - |
| OOL12_RS05485 (1090140) | 1090140..1091498 | - | 1359 | WP_001251212.1 | FtsK/SpoIIIE domain-containing protein | - |
| OOL12_RS05490 (1091552) | 1091552..1094047 | - | 2496 | WP_001049264.1 | ATP-binding protein | - |
| OOL12_RS05495 (1094082) | 1094082..1094465 | - | 384 | WP_000358144.1 | TcpE family conjugal transfer membrane protein | - |
| OOL12_RS05500 (1094477) | 1094477..1094737 | - | 261 | WP_000015639.1 | TcpD family membrane protein | - |
| OOL12_RS05505 (1094742) | 1094742..1095797 | - | 1056 | WP_000692002.1 | conjugal transfer protein | - |
| OOL12_RS05510 (1095858) | 1095858..1096949 | - | 1092 | WP_000172943.1 | replication initiation factor domain-containing protein | - |
| OOL12_RS05515 (1097124) | 1097124..1097426 | - | 303 | WP_000386891.1 | hypothetical protein | - |
| OOL12_RS05520 (1097440) | 1097440..1097760 | - | 321 | WP_000805733.1 | DUF961 family protein | - |
| OOL12_RS05525 (1097911) | 1097911..1098195 | - | 285 | WP_000134545.1 | hypothetical protein | - |
| OOL12_RS05530 (1098285) | 1098285..1098740 | - | 456 | WP_000169127.1 | Ig-like domain-containing protein | - |
| OOL12_RS05535 (1098832) | 1098832..1099473 | - | 642 | WP_000807536.1 | phage tail protein | - |
| OOL12_RS05540 (1099508) | 1099508..1099903 | - | 396 | WP_001023806.1 | DUF3168 domain-containing protein | - |
| OOL12_RS05545 (1099904) | 1099904..1100305 | - | 402 | WP_000110023.1 | hypothetical protein | - |
| OOL12_RS05550 (1100302) | 1100302..1100634 | - | 333 | WP_000395498.1 | hypothetical protein | - |
| OOL12_RS05555 (1100646) | 1100646..1100924 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| OOL12_RS05560 (1100993) | 1100993..1102156 | - | 1164 | WP_001142734.1 | phage major capsid protein | - |
| OOL12_RS05565 (1102168) | 1102168..1102941 | - | 774 | WP_061732663.1 | Clp protease ClpP | - |
| OOL12_RS05570 (1102925) | 1102925..1104163 | - | 1239 | WP_001100664.1 | phage portal protein | - |
| OOL12_RS05575 (1104168) | 1104168..1105859 | - | 1692 | WP_000153554.1 | terminase large subunit | - |
| OOL12_RS05580 (1105849) | 1105849..1106154 | - | 306 | WP_000778932.1 | P27 family phage terminase small subunit | - |
| OOL12_RS05585 (1106283) | 1106283..1106597 | - | 315 | WP_000160689.1 | HNH endonuclease | - |
| OOL12_RS05590 (1106743) | 1106743..1107180 | - | 438 | WP_000513699.1 | transcriptional regulator | - |
| OOL12_RS05595 (1107193) | 1107193..1108560 | - | 1368 | WP_078064348.1 | DEAD/DEAH box helicase | - |
| OOL12_RS05600 (1108541) | 1108541..1108831 | - | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| OOL12_RS05605 (1108965) | 1108965..1109069 | + | 105 | WP_001802079.1 | hypothetical protein | - |
| OOL12_RS05610 (1109172) | 1109172..1111619 | - | 2448 | WP_000884864.1 | virulence-associated E family protein | - |
| OOL12_RS05615 (1111671) | 1111671..1111871 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| OOL12_RS05620 (1111939) | 1111939..1112091 | - | 153 | WP_024937088.1 | transcriptional regulator | - |
| OOL12_RS05625 (1112091) | 1112091..1112477 | - | 387 | WP_001623479.1 | hypothetical protein | - |
| OOL12_RS05630 (1112467) | 1112467..1112703 | - | 237 | WP_000483477.1 | hypothetical protein | - |
| OOL12_RS05635 (1112728) | 1112728..1112964 | - | 237 | WP_000195806.1 | DUF1381 domain-containing protein | - |
| OOL12_RS05640 (1113001) | 1113001..1113528 | - | 528 | WP_000185638.1 | dUTP pyrophosphatase | - |
| OOL12_RS05645 (1113521) | 1113521..1113769 | - | 249 | WP_001065075.1 | DUF1024 family protein | - |
| OOL12_RS05650 (1113784) | 1113784..1114026 | - | 243 | WP_000132191.1 | SAV1978 family virulence-associated passenger protein | - |
| OOL12_RS05655 (1114041) | 1114041..1114241 | - | 201 | WP_000235324.1 | hypothetical protein | - |
| OOL12_RS05660 (1114244) | 1114244..1114501 | - | 258 | WP_000022728.1 | DUF3310 domain-containing protein | - |
| OOL12_RS05665 (1114501) | 1114501..1114902 | - | 402 | WP_000113974.1 | PVL family protein | - |
| OOL12_RS05670 (1114902) | 1114902..1115087 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| OOL12_RS05675 (1115100) | 1115100..1117052 | - | 1953 | WP_075583731.1 | DNA polymerase | - |
| OOL12_RS05680 (1117120) | 1117120..1117677 | - | 558 | WP_000645048.1 | DUF2815 family protein | - |
| OOL12_RS05685 (1117703) | 1117703..1118869 | - | 1167 | WP_000762548.1 | DUF2800 domain-containing protein | - |
| OOL12_RS05690 (1118866) | 1118866..1119228 | - | 363 | WP_000985976.1 | hypothetical protein | - |
| OOL12_RS05695 (1119243) | 1119243..1119566 | - | 324 | WP_000174994.1 | hypothetical protein | - |
| OOL12_RS05700 (1119645) | 1119645..1119806 | - | 162 | WP_001285948.1 | DUF1270 domain-containing protein | - |
| OOL12_RS05705 (1119819) | 1119819..1120082 | - | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| OOL12_RS05710 (1120109) | 1120109..1120324 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| OOL12_RS05715 (1120379) | 1120379..1120744 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| OOL12_RS05720 (1120713) | 1120713..1120958 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| OOL12_RS05725 (1121008) | 1121008..1121226 | - | 219 | WP_001001383.1 | hypothetical protein | - |
| OOL12_RS05730 (1121242) | 1121242..1122018 | - | 777 | WP_001148559.1 | phage antirepressor | - |
| OOL12_RS05735 (1122044) | 1122044..1122271 | - | 228 | WP_001030311.1 | hypothetical protein | - |
| OOL12_RS05740 (1122443) | 1122443..1123057 | + | 615 | WP_000801423.1 | XRE family transcriptional regulator | - |
| OOL12_RS05745 (1123073) | 1123073..1123993 | + | 921 | WP_000348133.1 | exonuclease domain-containing protein | - |
| OOL12_RS05750 (1124089) | 1124089..1124271 | + | 183 | WP_000705240.1 | hypothetical protein | - |
| OOL12_RS05755 (1124417) | 1124417..1124767 | - | 351 | WP_223223779.1 | hypothetical protein | - |
| OOL12_RS05760 (1125166) | 1125166..1126371 | + | 1206 | WP_000264751.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| OOL12_RS05765 (1126414) | 1126414..1128441 | - | 2028 | WP_061732661.1 | hypothetical protein | - |
| OOL12_RS05770 (1128434) | 1128434..1129363 | - | 930 | WP_001548912.1 | DUF1672 domain-containing protein | - |
| OOL12_RS05775 (1129608) | 1129608..1131359 | - | 1752 | WP_000987769.1 | two-component system sensor histidine kinase SrrB | - |
| OOL12_RS05780 (1131340) | 1131340..1132065 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| OOL12_RS05785 (1132198) | 1132198..1132935 | - | 738 | WP_000159577.1 | pseudouridine synthase | - |
| OOL12_RS05790 (1132928) | 1132928..1133470 | - | 543 | WP_000368653.1 | SMC-Scp complex subunit ScpB | - |
| OOL12_RS05795 (1133463) | 1133463..1134194 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| OOL12_RS05800 (1134286) | 1134286..1134792 | + | 507 | WP_001183429.1 | DUF309 domain-containing protein | - |
| OOL12_RS05805 (1134870) | 1134870..1135757 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| OOL12_RS05810 (1135806) | 1135806..1136255 | - | 450 | WP_000392691.1 | Fur family transcriptional regulator | - |
| OOL12_RS05815 (1136360) | 1136360..1136902 | - | 543 | WP_000365246.1 | NUDIX hydrolase | - |
| OOL12_RS05820 (1136984) | 1136984..1137892 | + | 909 | WP_001171351.1 | aldo/keto reductase | - |
| OOL12_RS05825 (1138108) | 1138108..1138356 | - | 249 | WP_000995800.1 | hypothetical protein | - |
| OOL12_RS05830 (1138372) | 1138372..1139127 | - | 756 | WP_000678232.1 | SDR family oxidoreductase | - |
| OOL12_RS05835 (1139269) | 1139269..1140084 | + | 816 | WP_000779748.1 | pyrroline-5-carboxylate reductase | - |
| OOL12_RS05840 (1140189) | 1140189..1141109 | - | 921 | WP_000454064.1 | ribonuclease Z | - |
| OOL12_RS05845 (1141422) | 1141422..1142906 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| OOL12_RS05850 (1143136) | 1143136..1144002 | + | 867 | WP_000382585.1 | AraC family transcriptional regulator | - |
| OOL12_RS05855 (1144085) | 1144085..1145734 | - | 1650 | WP_001041911.1 | alpha-glucosidase | - |
| OOL12_RS05860 (1145750) | 1145750..1146769 | - | 1020 | WP_000256338.1 | HTH-type transcriptional regulator MalR | VF |
| OOL12_RS05865 (1146770) | 1146770..1147024 | - | 255 | WP_001791638.1 | hypothetical protein | - |
| OOL12_RS05870 (1146963) | 1146963..1147334 | - | 372 | WP_000413437.1 | VOC family protein | - |
| OOL12_RS05875 (1147553) | 1147553..1148959 | - | 1407 | WP_000193707.1 | 6-phosphogluconate dehydrogenase, decarboxylating | VF |
| OOL12_RS05880 (1149027) | 1149027..1150160 | - | 1134 | WP_000606676.1 | tripeptidase T | - |
| OOL12_RS05885 (1150423) | 1150423..1150602 | + | 180 | WP_001789875.1 | stressosome-associated protein Prli42 | - |
| OOL12_RS05890 (1150729) | 1150729..1151709 | - | 981 | WP_000916195.1 | aromatic acid exporter family protein | - |
| OOL12_RS05895 (1151723) | 1151723..1152160 | - | 438 | WP_000367419.1 | bacilliredoxin BrxB | - |
| OOL12_RS05900 (1152511) | 1152511..1153785 | - | 1275 | WP_000406843.1 | dihydrolipoamide acetyltransferase family protein | - |
| OOL12_RS05905 (1153798) | 1153798..1154781 | - | 984 | WP_001096642.1 | alpha-ketoacid dehydrogenase subunit beta | - |
| OOL12_RS05910 (1154781) | 1154781..1155773 | - | 993 | WP_000568353.1 | thiamine pyrophosphate-dependent enzyme | - |
| OOL12_RS05915 (1155789) | 1155789..1157210 | - | 1422 | WP_001291535.1 | dihydrolipoyl dehydrogenase | - |
| OOL12_RS05920 (1157361) | 1157361..1159040 | - | 1680 | WP_000942211.1 | DNA repair protein RecN | - |
| OOL12_RS05925 (1159056) | 1159056..1159508 | - | 453 | WP_001124985.1 | transcriptional regulator ArgR | - |
| OOL12_RS05930 (1159940) | 1159940..1160821 | - | 882 | WP_000183378.1 | polyprenyl synthetase family protein | - |
| OOL12_RS05935 (1160799) | 1160799..1161029 | - | 231 | WP_000159865.1 | exodeoxyribonuclease VII small subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|