MGE detailed information
MGE type: IScluster/Tn MGE length: 22097 bp
Accession: NZ_OW969905 Location: 30284..52380 Organism: Citrobacter freundii isolate 0 Replicon: plasmid P1
Accession: NZ_OW969905 Location: 30284..52380 Organism: Citrobacter freundii isolate 0 Replicon: plasmid P1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ142_RS25030 | 25965..26198 | + | 234 | WP_230128415.1 | hotdog domain-containing protein | - |
| LQ142_RS25035 (AI3057V1_4880) | 26313..26789 | + | 477 | WP_072259269.1 | Dps family protein | - |
| LQ142_RS25040 (AI3057V1_4882) | 27081..27431 | - | 351 | WP_040115257.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LQ142_RS25045 (AI3057V1_4883) | 27592..29250 | + | 1659 | WP_040115255.1 | FAD-dependent oxidoreductase | - |
| LQ142_RS25050 (AI3057V1_4884) | 29496..29960 | + | 465 | WP_001243598.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| LQ142_RS25055 (AI3057V1_4885) | 30284..31306 | - | 1023 | WP_001567660.1 | IS110 family transposase ISSm1 | Transposase |
| LQ142_RS25060 (AI3057V1_4886) | 31330..32127 | - | 798 | Protein_42 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| LQ142_RS25065 (AI3057V1_4887) | 32192..32896 | + | 705 | WP_016240545.1 | IS6 family transposase IS26 | Transposase |
| LQ142_RS25070 (AI3057V1_4888) | 33056..33742 | + | 687 | WP_041205587.1 | nucleoside recognition domain-containing protein | - |
| LQ142_RS25075 (AI3057V1_4889) | 33739..34200 | + | 462 | WP_005326786.1 | YjiG family protein | - |
| LQ142_RS25080 (AI3057V1_4890) | 34213..35379 | + | 1167 | WP_059593932.1 | Isoaspartyl dipeptidase | VF |
| LQ142_RS25085 (AI3057V1_4891) | 35481..36200 | + | 720 | WP_088903417.1 | IS6 family transposase IS15DII | Transposase |
| LQ142_RS25090 (AI3057V1_REPA000000143) | 36229..36926 | + | 698 | WP_103215986.1 | IS1 family transposase IS1G | Transposase |
| LQ142_RS25095 | 37064..37354 | - | 291 | WP_227641047.1 | CPBP family intramembrane metalloprotease | - |
| LQ142_RS25100 (AI3057V1_4896) | 38571..38969 | + | 399 | WP_230126885.1 | IS3 family transposase ISAnsp11 | Transposase |
| LQ142_RS25105 (AI3057V1_4897) | 38966..40054 | + | 1089 | WP_230126882.1 | IS3 family transposase ISAnsp11 | Transposase |
| LQ142_RS25110 (AI3057V1_4898) | 40044..40691 | - | 648 | WP_230128418.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LQ142_RS25115 (AI3057V1_4899) | 41027..42049 | + | 1023 | WP_001567660.1 | IS110 family transposase ISSm1 | Transposase |
| LQ142_RS25120 | 42371..42463 | + | 93 | Protein_54 | plasmid partition protein ParG | - |
| LQ142_RS25125 (AI3057V1_4900) | 42601..42885 | - | 285 | WP_000277490.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LQ142_RS25130 (AI3057V1_4901) | 42878..43120 | - | 243 | WP_000124732.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| LQ142_RS25135 (AI3057V1_4902) | 43338..44042 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LQ142_RS25140 | 44095..44205 | + | 111 | Protein_58 | GlxA family transcriptional regulator | - |
| LQ142_RS25145 (AI3057V1_4903) | 44325..44615 | + | 291 | WP_016241603.1 | antibiotic biosynthesis monooxygenase family protein | - |
| LQ142_RS25150 (AI3057V1_4904) | 44583..44756 | - | 174 | WP_166488550.1 | hypothetical protein | - |
| LQ142_RS25155 (AI3057V1_4905) | 44788..45768 | + | 981 | WP_181633734.1 | IS5 family transposase ISKpn26 | Transposase |
| LQ142_RS25160 (AI3057V1_REPA000000176) | 45906..46109 | + | 204 | Protein_62 | IS481 family transposase ISKpn28 | Transposase |
| LQ142_RS25165 (AI3057V1_4907) | 46126..47289 | + | 1164 | WP_023336801.1 | 1,3-propanediol dehydrogenase | VF |
| LQ142_RS25170 (AI3057V1_4908) | 47310..47663 | + | 354 | WP_086801900.1 | glycerol dehydratase reactivase beta/small subunit family protein | - |
| LQ142_RS25175 (AI3057V1_4909) | 47739..48443 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LQ142_RS25180 (AI3057V1_4910) | 48497..51361 | + | 2865 | Protein_66 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| LQ142_RS25185 (AI3057V1_4911) | 51358..52380 | + | 1023 | WP_000156887.1 | IS110 family transposase IS1618 | Transposase |
| LQ142_RS25190 (AI3057V1_4913) | 52737..53240 | - | 504 | WP_007372141.1 | hypothetical protein | - |
| LQ142_RS25195 (AI3057V1_4914) | 53494..53910 | + | 417 | WP_008786793.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LQ142_RS25200 (AI3057V1_4915) | 53910..55175 | + | 1266 | WP_009652912.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| LQ142_RS25205 (AI3057V1_4916) | 55325..56215 | + | 891 | WP_007372144.1 | DNA replication terminus site-binding protein | - |
| LQ142_RS25210 (AI3057V1_4917) | 56528..56908 | + | 381 | WP_127649377.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|