MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 55370 bp
Accession: NZ_OW969711 Location: 2940705..2996074 Organism: Citrobacter koseri isolate 0 Replicon: chromosome
Accession: NZ_OW969711 Location: 2940705..2996074 Organism: Citrobacter koseri isolate 0 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQV24_RS14065 (2936339) | 2936339..2937070 | - | 732 | WP_024130492.1 | type II secretion system protein GspC | - |
| LQV24_RS14070 (2937371) | 2937371..2938948 | + | 1578 | WP_114848472.1 | peptidoglycan-binding domain-containing protein | - |
| LQV24_RS14075 (2938948) | 2938948..2939448 | + | 501 | WP_114848473.1 | hypothetical protein | - |
| LQV24_RS14080 (2939534) | 2939534..2940157 | - | 624 | WP_012133085.1 | helix-turn-helix domain-containing protein | - |
| LQV24_RS14085 (2940451) | 2940451..2941281 | - | 831 | WP_047457875.1 | N-acetylmuramoyl-L-alanine amidase | - |
| LQV24_RS14090 (2941278) | 2941278..2941601 | - | 324 | WP_012133087.1 | heavy metal-binding domain-containing protein | - |
| LQV24_RS14095 (2942099) | 2942099..2942584 | - | 486 | WP_230011416.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LQV24_RS14100 (2942572) | 2942572..2942838 | - | 267 | WP_230011418.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LQV24_RS14105 (2943007) | 2943007..2944167 | + | 1161 | Protein_2767 | IS30 family transposase | - |
| LQV24_RS14110 (2944488) | 2944488..2944934 | - | 447 | WP_230011420.1 | helix-turn-helix domain-containing protein | - |
| LQV24_RS14115 (2945082) | 2945082..2945858 | + | 777 | WP_230011422.1 | SDR family oxidoreductase | - |
| LQV24_RS14120 (2945869) | 2945869..2946288 | + | 420 | WP_230011437.1 | tautomerase family protein | - |
| LQV24_RS14125 (2946540) | 2946540..2947010 | - | 471 | WP_230011440.1 | tail fiber assembly protein | - |
| LQV24_RS14130 (2947026) | 2947026..2947628 | - | 603 | WP_230011443.1 | hypothetical protein | - |
| LQV24_RS14135 (2947628) | 2947628..2948308 | - | 681 | WP_230011454.1 | DUF2612 domain-containing protein | - |
| LQV24_RS14140 (2948305) | 2948305..2949504 | - | 1200 | WP_230011456.1 | baseplate J/gp47 family protein | - |
| LQV24_RS14145 (2949505) | 2949505..2949858 | - | 354 | WP_230011459.1 | hypothetical protein | - |
| LQV24_RS14150 (2949861) | 2949861..2950514 | - | 654 | WP_230011462.1 | Gp138 family membrane-puncturing spike protein | - |
| LQV24_RS14155 (2950576) | 2950576..2950956 | - | 381 | WP_230011464.1 | hypothetical protein | - |
| LQV24_RS14160 (2950953) | 2950953..2951723 | - | 771 | WP_230011467.1 | hypothetical protein | - |
| LQV24_RS14165 (2951847) | 2951847..2952176 | - | 330 | WP_230011470.1 | hypothetical protein | - |
| LQV24_RS14170 (2952176) | 2952176..2953240 | - | 1065 | WP_230011472.1 | hypothetical protein | - |
| LQV24_RS14175 (2953243) | 2953243..2953545 | - | 303 | WP_230011474.1 | hypothetical protein | - |
| LQV24_RS14180 (2953545) | 2953545..2954132 | - | 588 | WP_200051165.1 | hypothetical protein | - |
| LQV24_RS14185 (2954132) | 2954132..2956117 | - | 1986 | WP_230011477.1 | lytic transglycosylase | - |
| LQV24_RS14190 (2956107) | 2956107..2956295 | - | 189 | WP_200051163.1 | NTP pyrophosphohydrolase | - |
| LQV24_RS14195 (2956295) | 2956295..2956747 | - | 453 | WP_230011480.1 | hypothetical protein | - |
| LQV24_RS14200 (2956751) | 2956751..2957191 | - | 441 | WP_200029033.1 | DUF3277 family protein | - |
| LQV24_RS14205 (2957201) | 2957201..2958352 | - | 1152 | WP_230011483.1 | DUF3383 family protein | - |
| LQV24_RS14210 (2958355) | 2958355..2958903 | - | 549 | WP_230012644.1 | hypothetical protein | - |
| LQV24_RS14215 (2958896) | 2958896..2959300 | - | 405 | WP_230011487.1 | head-tail adaptor | - |
| LQV24_RS14220 (2959300) | 2959300..2959803 | - | 504 | WP_230011490.1 | hypothetical protein | - |
| LQV24_RS14225 (2959803) | 2959803..2960219 | - | 417 | WP_230011493.1 | DUF4054 domain-containing protein | - |
| LQV24_RS14230 (2960188) | 2960188..2960469 | - | 282 | WP_230011496.1 | hypothetical protein | - |
| LQV24_RS14235 (2960515) | 2960515..2961456 | - | 942 | WP_200096620.1 | DUF2184 domain-containing protein | - |
| LQV24_RS14240 (2961471) | 2961471..2961965 | - | 495 | WP_230011500.1 | hypothetical protein | - |
| LQV24_RS14245 (2961968) | 2961968..2963170 | - | 1203 | WP_230011502.1 | DUF2213 domain-containing protein | - |
| LQV24_RS14250 (2963576) | 2963576..2964298 | - | 723 | WP_230012646.1 | phage minor head protein | - |
| LQV24_RS14255 (2964180) | 2964180..2965631 | - | 1452 | WP_230011506.1 | DUF1073 domain-containing protein | - |
| LQV24_RS14260 (2965637) | 2965637..2967250 | - | 1614 | WP_230011508.1 | TerL protein | - |
| LQV24_RS14265 (2967449) | 2967449..2968051 | - | 603 | WP_230011512.1 | hypothetical protein | - |
| LQV24_RS14270 (2968298) | 2968298..2969302 | - | 1005 | WP_230011520.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LQV24_RS14275 (2969371) | 2969371..2969574 | - | 204 | WP_230011525.1 | hypothetical protein | - |
| LQV24_RS14280 (2969639) | 2969639..2970220 | - | 582 | WP_230011529.1 | hypothetical protein | - |
| LQV24_RS14285 (2970220) | 2970220..2970636 | - | 417 | WP_230011531.1 | structural protein | - |
| LQV24_RS14290 (2970639) | 2970639..2970986 | - | 348 | WP_181574319.1 | phage holin, lambda family | - |
| LQV24_RS14295 (2971156) | 2971156..2971350 | - | 195 | WP_044257038.1 | hypothetical protein | - |
| LQV24_RS14300 (2971545) | 2971545..2972327 | - | 783 | WP_230011533.1 | antitermination protein | - |
| LQV24_RS14305 (2972324) | 2972324..2972509 | - | 186 | WP_230011535.1 | hypothetical protein | - |
| LQV24_RS14310 (2972506) | 2972506..2973477 | - | 972 | WP_230011537.1 | toprim domain-containing protein | - |
| LQV24_RS14315 (2973474) | 2973474..2975045 | - | 1572 | WP_230012650.1 | DEAD/DEAH box helicase | - |
| LQV24_RS14320 (2975419) | 2975419..2975712 | - | 294 | WP_230011539.1 | hypothetical protein | - |
| LQV24_RS14325 (2975744) | 2975744..2976007 | - | 264 | WP_230011542.1 | YdaS family helix-turn-helix protein | - |
| LQV24_RS14330 (2976151) | 2976151..2976840 | + | 690 | WP_230011545.1 | S24 family peptidase | - |
| LQV24_RS14335 (2977000) | 2977000..2977416 | + | 417 | WP_230011548.1 | hypothetical protein | - |
| LQV24_RS14340 (2977603) | 2977603..2977791 | + | 189 | WP_230011550.1 | hypothetical protein | - |
| LQV24_RS14345 (2977772) | 2977772..2978137 | + | 366 | WP_230011552.1 | hypothetical protein | - |
| LQV24_RS14350 (2978137) | 2978137..2978391 | + | 255 | WP_230011554.1 | hypothetical protein | - |
| LQV24_RS14355 (2978363) | 2978363..2978581 | + | 219 | WP_230011556.1 | hypothetical protein | - |
| LQV24_RS14360 (2978578) | 2978578..2978994 | + | 417 | WP_230011567.1 | hypothetical protein | - |
| LQV24_RS14365 (2979116) | 2979116..2979340 | + | 225 | WP_230011570.1 | hypothetical protein | - |
| LQV24_RS14370 (2979337) | 2979337..2979816 | + | 480 | WP_230011573.1 | ATPase | - |
| LQV24_RS14375 (2979970) | 2979970..2980209 | + | 240 | WP_199972553.1 | excisionase family protein | - |
| LQV24_RS14380 (2980235) | 2980235..2981560 | + | 1326 | WP_230011578.1 | Putative defective protein IntQ ; Integrase | Integrase |
| LQV24_RS14385 (2981656) | 2981656..2982171 | + | 516 | WP_115181793.1 | lipoprotein | - |
| LQV24_RS14390 (2982564) | 2982564..2983292 | + | 729 | WP_024130493.1 | Arginine transport ATP-binding protein ArtP | VF |
| LQV24_RS14395 (2983310) | 2983310..2984041 | + | 732 | WP_024130494.1 | arginine ABC transporter substrate-binding protein ArtI | - |
| LQV24_RS14400 (2984048) | 2984048..2984764 | + | 717 | WP_012133091.1 | arginine ABC transporter permease ArtQ | - |
| LQV24_RS14405 (2984764) | 2984764..2985432 | + | 669 | WP_012133092.1 | arginine ABC transporter permease ArtM | - |
| LQV24_RS14410 (2985694) | 2985694..2986425 | + | 732 | WP_012133094.1 | arginine ABC transporter substrate-binding protein ArtJ | - |
| LQV24_RS14415 (2986463) | 2986463..2987932 | - | 1470 | WP_115181794.1 | ATP-binding protein | - |
| LQV24_RS14420 (2987916) | 2987916..2988623 | - | 708 | WP_047457883.1 | Transcriptional regulatory protein WalR | VF |
| LQV24_RS14425 (2988756) | 2988756..2989886 | - | 1131 | WP_114848476.1 | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | - |
| LQV24_RS14430 (2989927) | 2989927..2990415 | - | 489 | WP_071260108.1 | YbjO family protein | - |
| LQV24_RS14435 (2990476) | 2990476..2991321 | - | 846 | WP_012133100.1 | putrescine ABC transporter permease PotI | - |
| LQV24_RS14440 (2991318) | 2991318..2992271 | - | 954 | WP_012133101.1 | putrescine ABC transporter permease PotH | - |
| LQV24_RS14445 (2992281) | 2992281..2993414 | - | 1134 | WP_114848477.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| LQV24_RS14450 (2993512) | 2993512..2994624 | - | 1113 | WP_012133103.1 | spermidine/putrescine ABC transporter substrate-binding protein PotF | - |
| LQV24_RS14455 (2995042) | 2995042..2995518 | - | 477 | WP_047457888.1 | YbjN domain-containing protein | - |
| LQV24_RS14460 (2995608) | 2995608..2996510 | - | 903 | WP_024130496.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| LQV24_RS14465 (2996563) | 2996563..2997285 | - | 723 | WP_012133106.1 | nitroreductase NfsA | - |
| LQV24_RS14470 (2997269) | 2997269..2997559 | - | 291 | WP_049009778.1 | YbjC family protein | - |
| LQV24_RS14475 (2997731) | 2997731..2997994 | + | 264 | WP_024130497.1 | GrxA family glutaredoxin | - |
| LQV24_RS14480 (2998025) | 2998025..2998402 | - | 378 | WP_024130498.1 | inner membrane protein YbjM | - |
| LQV24_RS14485 (2998673) | 2998673..3000358 | + | 1686 | WP_012133110.1 | aspartate:alanine antiporter | - |
| LQV24_RS14490 (3000577) | 3000577..3000831 | - | 255 | WP_230011580.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|