MGE detailed information
MGE type: Conjugative plasmid MGE length: 103689 bp
Accession: NZ_OW969692 Location: 1..103689 Organism: Citrobacter koseri isolate 0 Replicon: plasmid P1
Accession: NZ_OW969692 Location: 1..103689 Organism: Citrobacter koseri isolate 0 Replicon: plasmid P1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQV22_RS22125 (AN2351V1_4290) | 1..1032 | + | 1032 | WP_000907880.1 | plasmid replication initiator RepA | - |
| LQV22_RS22130 (AN2351V1_4291) | 1940..2224 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| LQV22_RS22135 (AN2351V1_4292) | 2224..2499 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LQV22_RS22140 (AN2351V1_4293) | 2605..2886 | + | 282 | WP_001105066.1 | hypothetical protein | - |
| LQV22_RS22145 | 3077..3343 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| LQV22_RS22150 (AN2351V1_4294) | 3581..4183 | - | 603 | WP_000517694.1 | ProQ/FINO family protein | - |
| LQV22_RS22155 (AN2351V1_4295) | 4537..5883 | + | 1347 | WP_001132025.1 | protein YagA | - |
| LQV22_RS22160 | 6442..6744 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| LQV22_RS22165 (AN2351V1_4296) | 6741..7367 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| LQV22_RS22170 (AN2351V1_4297) | 7571..8842 | - | 1272 | WP_000457510.1 | Y-family DNA polymerase | - |
| LQV22_RS22175 (AN2351V1_4298) | 8842..9279 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LQV22_RS22180 (AN2351V1_4299) | 9276..9524 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| LQV22_RS22185 (AN2351V1_4300) | 9943..10845 | + | 903 | WP_001330417.1 | DUF1281 domain-containing protein | - |
| LQV22_RS22190 | 10842..11153 | + | 312 | WP_031935767.1 | hypothetical protein | - |
| LQV22_RS22195 (AN2351V1_4301) | 11229..11912 | + | 684 | WP_000086137.1 | DNA methylase | - |
| LQV22_RS22200 (AN2351V1_4302) | 11913..12134 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| LQV22_RS22205 (AN2351V1_4303) | 12064..12582 | + | 519 | WP_223168556.1 | DUF1380 family protein | - |
| LQV22_RS22210 (AN2351V1_4304) | 12627..13397 | + | 771 | WP_001006204.1 | hypothetical protein | - |
| LQV22_RS22215 (AN2351V1_4305) | 13813..14238 | + | 426 | WP_001198900.1 | antirestriction protein | - |
| LQV22_RS22220 (AN2351V1_4306) | 14285..14707 | + | 423 | WP_000271688.1 | DUF1380 family protein | - |
| LQV22_RS22225 (AN2351V1_4307) | 14704..14895 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| LQV22_RS22230 | 15058..15282 | + | 225 | WP_230032360.1 | hypothetical protein | - |
| LQV22_RS22235 (AN2351V1_4309) | 15667..16194 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| LQV22_RS22240 (AN2351V1_4310) | 16252..16485 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| LQV22_RS22245 (AN2351V1_4311) | 16544..18502 | + | 1959 | WP_001145476.1 | ParB/RepB/Spo0J family partition protein | - |
| LQV22_RS22250 (AN2351V1_4312) | 18557..18991 | + | 435 | WP_000845903.1 | conjugation system SOS inhibitor PsiB | - |
| LQV22_RS22255 (AN2351V1_4313) | 18988..19707 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| LQV22_RS22260 (AN2351V1_4314) | 19704..20300 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| LQV22_RS22265 (AN2351V1_4315) | 20762..21262 | + | 501 | WP_000117631.1 | antirestriction protein ArdA | - |
| LQV22_RS22270 (AN2351V1_4316) | 21995..22429 | + | 435 | WP_000218862.1 | hypothetical protein | - |
| LQV22_RS22275 (AN2351V1_4317) | 22522..22788 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| LQV22_RS22280 (AN2351V1_4318) | 22965..23354 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| LQV22_RS22285 (AN2351V1_4319) | 23351..24277 | + | 927 | WP_000038335.1 | Recombination-promoting nuclease RpnA | VF |
| LQV22_RS22290 (AN2351V1_4320) | 24277..24522 | + | 246 | WP_001260883.1 | hypothetical protein | - |
| LQV22_RS22295 (AN2351V1_4321) | 24553..24804 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| LQV22_RS22300 (AN2351V1_4322) | 25385..26233 | + | 849 | WP_001077034.1 | DUF4942 domain-containing protein | - |
| LQV22_RS22305 (AN2351V1_4323) | 26319..26654 | - | 336 | WP_000157083.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| LQV22_RS22310 (AN2351V1_4324) | 26887..27219 | + | 333 | WP_001291058.1 | plasmid mobilization protein MobA | - |
| LQV22_RS22315 (AN2351V1_4325) | 27231..29942 | + | 2712 | WP_000991384.1 | Protein TraI | Relaxase |
| LQV22_RS22320 (AN2351V1_4326) | 30010..31581 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| LQV22_RS22325 (AN2351V1_4327) | 31601..31948 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| LQV22_RS22330 (AN2351V1_4328) | 31948..32625 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| LQV22_RS22335 (AN2351V1_4329) | 32717..33148 | + | 432 | WP_001335086.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| LQV22_RS22340 (AN2351V1_4330) | 33498..34991 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| LQV22_RS22345 (AN2351V1_4331) | 35022..35906 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| LQV22_RS22350 (AN2351V1_4332) | 36123..37337 | + | 1215 | WP_039026029.1 | Inner membrane transport protein YdhC | ARG |
| LQV22_RS22355 (AN2351V1_4333) | 37365..37670 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| LQV22_RS22360 (AN2351V1_4334) | 37782..38186 | + | 405 | Protein_47 | IS91 family transposase ISPps1 | Transposase |
| LQV22_RS22365 (AN2351V1_4335) | 38293..39024 | - | 732 | Protein_48 | hypothetical protein | ARG |
| LQV22_RS22370 (AN2351V1_4336) | 39059..42064 | - | 3006 | WP_001143759.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| LQV22_RS22375 (AN2351V1_4337) | 42228..42785 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| LQV22_RS22380 (AN2351V1_4338) | 42968..43828 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| LQV22_RS22385 | 43977..44084 | - | 108 | Protein_52 | aminoglycoside phosphotransferase family protein | - |
| LQV22_RS22390 | 44084..44887 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| LQV22_RS22395 (AN2351V1_4340) | 44948..45763 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| LQV22_RS22400 (AN2351V1_4342) | 46627..48930 | - | 2304 | WP_000077663.1 | F-type conjugative transfer protein TrbC | - |
| LQV22_RS22405 (AN2351V1_4343) | 48911..50035 | - | 1125 | WP_001557490.1 | DsbC family protein | - |
| LQV22_RS22410 (AN2351V1_4344) | 50032..51321 | - | 1290 | WP_000121916.1 | IncI1-type conjugal transfer protein TrbA | - |
| LQV22_RS22415 | 51659..51805 | + | 147 | WP_001346191.1 | hypothetical protein | - |
| LQV22_RS23145 (AN2351V1_4345) | 51858..51953 | + | 96 | WP_001388983.1 | DinQ-like type I toxin DqlB | - |
| LQV22_RS23150 (AN2351V1_4346) | 52542..52637 | + | 96 | WP_001388983.1 | DinQ-like type I toxin DqlB | - |
| LQV22_RS22425 (AN2351V1_4347) | 52700..52876 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| LQV22_RS22430 (AN2351V1_4348) | 53026..53493 | - | 468 | WP_000598962.1 | thermonuclease family protein | - |
| LQV22_RS22435 (AN2351V1_4349) | 53653..54276 | + | 624 | WP_001155250.1 | helix-turn-helix domain-containing protein | - |
| LQV22_RS22440 (AN2351V1_4351) | 54474..54689 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| LQV22_RS22445 (AN2351V1_4352) | 54693..55061 | - | 369 | WP_001345852.1 | hypothetical protein | - |
| LQV22_RS22450 (AN2351V1_4353) | 55352..55594 | - | 243 | WP_000650923.1 | hypothetical protein | - |
| LQV22_RS22455 (AN2351V1_4354) | 55924..56076 | + | 153 | WP_001335079.1 | Hok/Gef family protein | - |
| LQV22_RS22460 (AN2351V1_4355) | 56214..57800 | - | 1587 | WP_000004564.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| LQV22_RS22465 (AN2351V1_4356) | 58074..58721 | - | 648 | WP_015056434.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| LQV22_RS22470 (AN2351V1_4357) | 58809..60968 | - | 2160 | WP_000691811.1 | DotA/TraY family protein | - |
| LQV22_RS22475 (AN2351V1_4358) | 61043..61612 | - | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| LQV22_RS22480 (AN2351V1_4359) | 61609..62814 | - | 1206 | WP_001189548.1 | conjugal transfer protein TraW | - |
| LQV22_RS22485 (AN2351V1_4360) | 62772..63392 | - | 621 | WP_000286855.1 | hypothetical protein | - |
| LQV22_RS22490 (AN2351V1_4361) | 63392..66436 | - | 3045 | WP_001024769.1 | conjugal transfer protein | - |
| LQV22_RS22495 (AN2351V1_4362) | 66572..66760 | - | 189 | Protein_75 | IS66 family transposase IS682 | Transposase |
| LQV22_RS22500 (AN2351V1_4363) | 66821..67954 | + | 1134 | WP_000555378.1 | IS110 family transposase ISEc45 | Transposase |
| LQV22_RS22505 (AN2351V1_4364) | 68207..69631 | - | 1425 | Protein_77 | IS66 family transposase ISEc23 | Transposase |
| LQV22_RS22510 (AN2351V1_4365) | 69662..70012 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| LQV22_RS22515 (AN2351V1_4366) | 70009..70434 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| LQV22_RS22520 (AN2351V1_4367) | 70717..71343 | - | 627 | WP_000785703.1 | hypothetical protein | - |
| LQV22_RS23155 (AN2351V1_4368) | 71450..71701 | - | 252 | WP_001277573.1 | hypothetical protein | - |
| LQV22_RS22530 (AN2351V1_4369) | 71758..72156 | - | 399 | WP_000088813.1 | hypothetical protein | - |
| LQV22_RS22535 (AN2351V1_4370) | 72203..72733 | - | 531 | WP_000987021.1 | conjugal transfer protein TraQ | - |
| LQV22_RS22540 (AN2351V1_4371) | 72730..73443 | - | 714 | WP_000787002.1 | conjugal transfer protein TraP | - |
| LQV22_RS22545 (AN2351V1_4372) | 73440..74777 | - | 1338 | WP_001557492.1 | conjugal transfer protein TraO | - |
| LQV22_RS22550 (AN2351V1_4373) | 74781..75755 | - | 975 | WP_000547386.1 | hypothetical protein | VF |
| LQV22_RS22555 (AN2351V1_4374) | 75766..76461 | - | 696 | WP_001287545.1 | DotI/IcmL family type IV secretion protein | - |
| LQV22_RS22560 (AN2351V1_4375) | 76473..76823 | - | 351 | WP_068862892.1 | conjugal transfer protein | - |
| LQV22_RS22565 (AN2351V1_4376) | 76840..80901 | - | 4062 | WP_000842456.1 | DUF5710 domain-containing protein | - |
| LQV22_RS22570 (AN2351V1_4377) | 80965..81255 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| LQV22_RS22575 (AN2351V1_4378) | 81252..82400 | - | 1149 | WP_000775210.1 | putative protein YggR | VF |
| LQV22_RS22580 (AN2351V1_4379) | 82384..83220 | - | 837 | WP_000745049.1 | hypothetical protein | VF |
| LQV22_RS22585 (AN2351V1_4380) | 83217..83675 | - | 459 | WP_001170111.1 | DotD/TraH family lipoprotein | - |
| LQV22_RS22590 (AN2351V1_4381) | 83779..84981 | - | 1203 | WP_000979993.1 | conjugal transfer protein TraF | - |
| LQV22_RS22595 (AN2351V1_4382) | 85083..85904 | - | 822 | WP_000845373.1 | hypothetical protein | - |
| LQV22_RS22600 | 86069..86263 | - | 195 | Protein_96 | integrase | - |
| LQV22_RS22605 (AN2351V1_REPA000000007) | 86382..87079 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| LQV22_RS22610 (AN2351V1_4386) | 87153..88514 | - | 1362 | WP_001168171.1 | hypothetical protein | VF |
| LQV22_RS22615 (AN2351V1_4387) | 88532..89158 | - | 627 | WP_000939245.1 | prepilin peptidase | - |
| LQV22_RS22620 (AN2351V1_4388) | 89174..89659 | - | 486 | WP_001080767.1 | hypothetical protein | VF |
| LQV22_RS22625 (AN2351V1_4389) | 89704..90240 | - | 537 | WP_000111534.1 | hypothetical protein | VF |
| LQV22_RS22630 (AN2351V1_4390) | 90302..91396 | - | 1095 | WP_000697158.1 | type II secretion system F family protein | - |
| LQV22_RS22635 (AN2351V1_4391) | 91398..92906 | - | 1509 | WP_000880805.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| LQV22_RS22640 (AN2351V1_4392) | 93010..93468 | - | 459 | WP_000095885.1 | hypothetical protein | VF |
| LQV22_RS22645 (AN2351V1_4393) | 93458..94753 | - | 1296 | WP_000129882.1 | type 4b pilus protein PilO2 | - |
| LQV22_RS22650 (AN2351V1_4394) | 94774..96393 | - | 1620 | WP_001035565.1 | Outer membrane lipoprotein BfpB | VF |
| LQV22_RS22655 (AN2351V1_4395) | 96425..96862 | - | 438 | WP_000539952.1 | hypothetical protein | VF |
| LQV22_RS22660 (AN2351V1_4396) | 96866..97936 | - | 1071 | WP_000730430.1 | hypothetical protein | VF |
| LQV22_RS22665 | 98163..98498 | - | 336 | WP_001335624.1 | hypothetical protein | - |
| LQV22_RS22670 (AN2351V1_4397) | 98614..98856 | - | 243 | WP_001271734.1 | PilI type IV pilus biogenesis protein | - |
| LQV22_RS22675 (AN2351V1_4398) | 98937..100631 | - | 1695 | WP_000482665.1 | flotillin family protein | - |
| LQV22_RS22680 (AN2351V1_4399) | 100658..101278 | - | 621 | WP_000176497.1 | DUF1449 family protein | - |
| LQV22_RS22685 (AN2351V1_4400) | 101545..102207 | - | 663 | WP_000154142.1 | hypothetical protein | - |
| LQV22_RS22690 (AN2351V1_4401) | 102348..102989 | - | 642 | WP_000335849.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|