MGE detailed information
MGE type: Prophage MGE length: 49996 bp
Accession: NZ_OW969691 Location: 80356..130351 Organism: Citrobacter koseri isolate 0 Replicon: chromosome
Accession: NZ_OW969691 Location: 80356..130351 Organism: Citrobacter koseri isolate 0 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQV22_RS00350 (76081) | 76081..77472 | - | 1392 | WP_024131065.1 | xanthine/proton symporter XanP | - |
| LQV22_RS00355 (77576) | 77576..79657 | - | 2082 | WP_134768935.1 | ATP-dependent DNA helicase RecG | - |
| LQV22_RS00360 (79662) | 79662..80351 | - | 690 | WP_049011031.1 | tRNA (guanosine(18)-2'-O)-methyltransferase TrmH | - |
| LQV22_RS00365 (80356) | 80356..82467 | - | 2112 | WP_012135784.1 | Bifunctional (p)ppGpp synthase/hydrolase SpoT | VF |
| LQV22_RS00370 (82486) | 82486..82761 | - | 276 | WP_000135058.1 | DNA-directed RNA polymerase subunit omega | - |
| LQV22_RS00375 (82816) | 82816..83439 | - | 624 | WP_012135783.1 | guanylate kinase | - |
| LQV22_RS00380 (83696) | 83696..85378 | + | 1683 | WP_214143582.1 | NAD-dependent DNA ligase LigB | - |
| LQV22_RS00385 (85375) | 85375..85992 | - | 618 | WP_047460236.1 | trimeric intracellular cation channel family protein | - |
| LQV22_RS00390 (86406) | 86406..87263 | + | 858 | WP_033631362.1 | DUF6387 family protein | - |
| LQV22_RS00395 (87357) | 87357..87563 | + | 207 | WP_016246690.1 | AlpA family transcriptional regulator | - |
| LQV22_RS00400 (87898) | 87898..89097 | + | 1200 | WP_046623960.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LQV22_RS00405 (89097) | 89097..90443 | + | 1347 | WP_046623962.1 | hypothetical protein ; Integrase | Integrase |
| LQV22_RS00410 (90444) | 90444..92321 | + | 1878 | WP_046623964.1 | DNA-binding protein | - |
| LQV22_RS00415 (92349) | 92349..92744 | + | 396 | WP_046623967.1 | hypothetical protein | - |
| LQV22_RS00420 (92860) | 92860..93276 | + | 417 | WP_016246685.1 | hypothetical protein | - |
| LQV22_RS00425 (93741) | 93741..94319 | - | 579 | WP_230031920.1 | DUF4755 domain-containing protein | - |
| LQV22_RS00430 (94559) | 94559..95746 | - | 1188 | WP_230031921.1 | relaxase/mobilization nuclease domain-containing protein | - |
| LQV22_RS00435 (95743) | 95743..96126 | - | 384 | WP_010617511.1 | hypothetical protein | - |
| LQV22_RS00440 (96338) | 96338..98026 | - | 1689 | WP_046623974.1 | AAA family ATPase | - |
| LQV22_RS00445 (98049) | 98049..98921 | - | 873 | WP_230031922.1 | DNA adenine methylase | - |
| LQV22_RS00450 (99010) | 99010..100482 | - | 1473 | WP_230031923.1 | hypothetical protein | - |
| - (100937) | 100937..100983 | + | 47 | NuclAT_0 | - | Antitoxin Detail |
| - (100937) | 100937..100983 | + | 47 | NuclAT_0 | - | Antitoxin Detail |
| - (100937) | 100937..100983 | + | 47 | NuclAT_0 | - | Antitoxin Detail |
| - (100937) | 100937..100983 | + | 47 | NuclAT_0 | - | Antitoxin Detail |
| LQV22_RS00455 (101080) | 101080..101526 | + | 447 | WP_230031924.1 | hypothetical protein | Toxin Detail |
| LQV22_RS00460 (101598) | 101598..102809 | - | 1212 | WP_230031925.1 | Prophage integrase IntS ; Integrase | Integrase |
| LQV22_RS00465 (103013) | 103013..103876 | - | 864 | WP_200024275.1 | YicC/YloC family endoribonuclease | - |
| LQV22_RS00470 (104002) | 104002..104718 | + | 717 | WP_012135779.1 | ribonuclease PH | - |
| LQV22_RS00475 (104783) | 104783..105424 | + | 642 | WP_024131063.1 | orotate phosphoribosyltransferase | - |
| LQV22_RS00480 (105500) | 105500..106096 | - | 597 | WP_012135776.1 | nucleoid occlusion factor SlmA | - |
| LQV22_RS00485 (106206) | 106206..106664 | - | 459 | WP_006687626.1 | dUTP diphosphatase | - |
| LQV22_RS00490 (106642) | 106642..107862 | - | 1221 | WP_096753935.1 | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC | - |
| LQV22_RS00495 (108036) | 108036..108698 | + | 663 | WP_047460249.1 | DNA repair protein RadC | - |
| LQV22_RS00500 (108915) | 108915..109151 | + | 237 | WP_003024071.1 | 50S ribosomal protein L28 | - |
| LQV22_RS00505 (109172) | 109172..109339 | + | 168 | WP_001051798.1 | 50S ribosomal protein L33 | - |
| LQV22_RS00510 (109438) | 109438..110247 | + | 810 | WP_047460253.1 | bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase | - |
| LQV22_RS00515 (110299) | 110299..110778 | - | 480 | WP_012135771.1 | Phosphopantetheine adenylyltransferase | VF |
| LQV22_RS00520 (110787) | 110787..112064 | - | 1278 | WP_012135770.1 | 3-deoxy-D-manno-octulosonic acid transferase | VF |
| LQV22_RS00525 (112487) | 112487..113611 | + | 1125 | WP_115608696.1 | Lipopolysaccharide core biosynthesis protein RfaG | VF |
| LQV22_RS00530 (113604) | 113604..114401 | + | 798 | WP_071259183.1 | Lipopolysaccharide core heptose(I) kinase RfaP | VF |
| LQV22_RS00535 (114433) | 114433..115452 | + | 1020 | WP_012135766.1 | glycosyltransferase | - |
| LQV22_RS00540 (115490) | 115490..116482 | + | 993 | WP_047460263.1 | glycosyltransferase | - |
| LQV22_RS00545 (116508) | 116508..117452 | - | 945 | WP_200024274.1 | General stress protein A | VF |
| LQV22_RS00550 (117453) | 117453..118508 | - | 1056 | WP_112001405.1 | lipopolysaccharide core heptosyltransferase RfaQ | - |
| LQV22_RS00555 (118510) | 118510..119523 | - | 1014 | WP_214143581.1 | glycosyltransferase | - |
| LQV22_RS00560 (119516) | 119516..120799 | - | 1284 | WP_175479751.1 | O-antigen ligase family protein | - |
| LQV22_RS00565 (120818) | 120818..121786 | - | 969 | WP_214143580.1 | Lipopolysaccharide heptosyltransferase 1 | VF |
| LQV22_RS00570 (121790) | 121790..122836 | - | 1047 | WP_058668282.1 | ADP-heptose--LPS heptosyltransferase 2 | VF |
| LQV22_RS00575 (122845) | 122845..123777 | - | 933 | WP_012135758.1 | ADP-L-glycero-D-manno-heptose-6-epimerase | VF |
| LQV22_RS00580 (123993) | 123993..125189 | + | 1197 | WP_071259194.1 | 2-amino-3-ketobutyrate coenzyme A ligase | VF |
| LQV22_RS00585 (125199) | 125199..126224 | + | 1026 | WP_012135756.1 | L-threonine 3-dehydrogenase | - |
| LQV22_RS00590 (126278) | 126278..126964 | - | 687 | WP_110493650.1 | lipopolysaccharide core heptose(II) kinase RfaY | - |
| LQV22_RS00595 (127144) | 127144..128178 | + | 1035 | WP_114848115.1 | glycosyltransferase | - |
| LQV22_RS00600 (128165) | 128165..129130 | - | 966 | WP_200024271.1 | divergent polysaccharide deacetylase family protein | - |
| LQV22_RS00605 (129134) | 129134..130393 | - | 1260 | WP_230032335.1 | murein hydrolase activator EnvC | - |
| LQV22_RS00610 (130427) | 130427..131971 | - | 1545 | WP_115626039.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
| LQV22_RS00615 (132219) | 132219..132650 | + | 432 | WP_012135748.1 | rhodanese-like domain-containing protein | - |
| LQV22_RS00620 (132678) | 132678..132929 | + | 252 | WP_047358806.1 | glutaredoxin 3 | - |
| LQV22_RS00625 (132977) | 132977..133444 | + | 468 | WP_003024155.1 | protein-export chaperone SecB | - |
| LQV22_RS00630 (133444) | 133444..134463 | + | 1020 | WP_012135746.1 | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|