MGE detailed information
MGE type: Conjugative plasmid MGE length: 90448 bp
Accession: NZ_OW968290 Location: 1..90448 Organism: Escherichia coli isolate 10 Replicon: plasmid P2
Accession: NZ_OW968290 Location: 1..90448 Organism: Escherichia coli isolate 10 Replicon: plasmid P2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ134_RS24295 (46) | 46..1077 | + | 1032 | WP_000907861.1 | plasmid replication initiator RepA | - |
| LQ134_RS24300 (1985) | 1985..2269 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| LQ134_RS24305 (2269) | 2269..2544 | + | 276 | WP_001582571.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LQ134_RS24310 (2650) | 2650..2853 | + | 204 | Protein_3 | hypothetical protein | - |
| LQ134_RS24315 (3123) | 3123..3389 | - | 267 | WP_000627829.1 | hypothetical protein | - |
| LQ134_RS24320 (3389) | 3389..3883 | - | 495 | WP_001582574.1 | hypothetical protein | - |
| LQ134_RS24325 (3939) | 3939..4541 | - | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
| LQ134_RS24330 (4895) | 4895..6241 | + | 1347 | WP_001132032.1 | protein YagA | - |
| LQ134_RS24335 (6520) | 6520..8400 | + | 1881 | WP_001582575.1 | colicin Ia central receptor-binding domain-containing protein | - |
| LQ134_RS24340 (8422) | 8422..8757 | - | 336 | WP_001080734.1 | colicin 1A immunity protein | - |
| LQ134_RS24345 (8886) | 8886..9233 | + | 348 | WP_001582578.1 | DUF6404 family protein | - |
| LQ134_RS24350 (9253) | 9253..9843 | - | 591 | WP_000194572.1 | hypothetical protein | - |
| LQ134_RS24355 (9843) | 9843..10097 | - | 255 | WP_000343103.1 | hypothetical protein | - |
| LQ134_RS24360 (10665) | 10665..11078 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| LQ134_RS24365 (11080) | 11080..11859 | + | 780 | WP_151310090.1 | site-specific integrase | - |
| LQ134_RS24370 (12039) | 12039..12683 | + | 645 | WP_230156154.1 | ParA family protein | - |
| LQ134_RS24375 (12770) | 12770..13078 | + | 309 | WP_119014982.1 | molecular chaperone GroEL | - |
| LQ134_RS24380 (13491) | 13491..14471 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| LQ134_RS24385 (14464) | 14464..14880 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| LQ134_RS24390 (14882) | 14882..16156 | - | 1275 | WP_000457498.1 | Y-family DNA polymerase | - |
| LQ134_RS24395 (16156) | 16156..16593 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LQ134_RS24400 (16590) | 16590..16838 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| LQ134_RS24405 (17256) | 17256..18158 | + | 903 | WP_089603312.1 | DUF1281 domain-containing protein | - |
| LQ134_RS24410 (18155) | 18155..18466 | + | 312 | WP_014640311.1 | hypothetical protein | - |
| LQ134_RS24415 (18542) | 18542..19225 | + | 684 | WP_000086148.1 | DNA methylase | - |
| LQ134_RS24420 (19226) | 19226..19447 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| LQ134_RS24425 (19428) | 19428..19895 | + | 468 | WP_223152171.1 | DUF1380 family protein | - |
| LQ134_RS24430 (19941) | 19941..20717 | + | 777 | WP_023352051.1 | hypothetical protein | - |
| LQ134_RS24435 (21131) | 21131..21556 | + | 426 | WP_001470882.1 | antirestriction protein | - |
| LQ134_RS24440 (21603) | 21603..22025 | + | 423 | WP_000271682.1 | DUF1380 family protein | - |
| LQ134_RS24445 (22022) | 22022..22213 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| LQ134_RS24450 (22984) | 22984..23511 | + | 528 | WP_001276114.1 | single-stranded DNA-binding protein | - |
| LQ134_RS24455 (23569) | 23569..23802 | + | 234 | WP_000005985.1 | DUF905 family protein | - |
| LQ134_RS24460 (23861) | 23861..25819 | + | 1959 | WP_230156157.1 | ParB/RepB/Spo0J family partition protein | - |
| LQ134_RS24465 (25874) | 25874..26308 | + | 435 | WP_000845904.1 | conjugation system SOS inhibitor PsiB | - |
| LQ134_RS24470 (26305) | 26305..27024 | + | 720 | WP_230156160.1 | plasmid SOS inhibition protein A | - |
| LQ134_RS24475 (27021) | 27021..27617 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| LQ134_RS24480 (28080) | 28080..28580 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| LQ134_RS24485 (29309) | 29309..29743 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| LQ134_RS24490 (29837) | 29837..30103 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| LQ134_RS24495 (30168) | 30168..31058 | + | 891 | WP_000038332.1 | ISNCY family transposase ISSen7 | VF |
| LQ134_RS24500 (31058) | 31058..31303 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| LQ134_RS24505 (31334) | 31334..31585 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| LQ134_RS24510 (32166) | 32166..32552 | + | 387 | Protein_43 | DUF4942 domain-containing protein | - |
| LQ134_RS24515 (32786) | 32786..34321 | + | 1536 | WP_023181050.1 | IS21 family transposase ISSso4 | Transposase |
| LQ134_RS24520 (34338) | 34338..35093 | + | 756 | WP_001282653.1 | IS21 family transposase ISSso4 | Transposase |
| LQ134_RS24525 (35194) | 35194..35658 | + | 465 | Protein_46 | DUF4942 domain-containing protein | - |
| LQ134_RS24530 (35744) | 35744..36079 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| LQ134_RS24535 (36313) | 36313..36645 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| LQ134_RS24540 (36656) | 36656..39355 | + | 2700 | WP_001405892.1 | hypothetical protein | Relaxase |
| LQ134_RS24545 (39392) | 39392..41683 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| LQ134_RS24550 (41676) | 41676..42746 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| LQ134_RS24555 (42765) | 42765..43973 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (44153) | 44153..44215 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (44153) | 44153..44215 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (44153) | 44153..44215 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (44153) | 44153..44215 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| LQ134_RS24560 (44265) | 44265..44417 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| LQ134_RS24565 (44489) | 44489..44740 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| LQ134_RS25775 (45239) | 45239..45334 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| LQ134_RS24575 (45399) | 45399..45575 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| LQ134_RS24580 (45967) | 45967..46176 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| LQ134_RS24585 (46248) | 46248..46898 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| LQ134_RS24590 (46972) | 46972..49140 | - | 2169 | WP_001774191.1 | DotA/TraY family protein | - |
| LQ134_RS24595 (49237) | 49237..49821 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| LQ134_RS24600 (49850) | 49850..51052 | - | 1203 | WP_001385654.1 | IncI1-type conjugal transfer protein TraW | - |
| LQ134_RS24605 (51019) | 51019..51633 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| LQ134_RS24610 (51633) | 51633..54677 | - | 3045 | WP_230156169.1 | IncI1-type conjugal transfer protein TraU | - |
| LQ134_RS24615 (54767) | 54767..55567 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| LQ134_RS24620 (55551) | 55551..55739 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| LQ134_RS24625 (55803) | 55803..56207 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| LQ134_RS24630 (56258) | 56258..56785 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| LQ134_RS24635 (56785) | 56785..57489 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| LQ134_RS24640 (57489) | 57489..58778 | - | 1290 | WP_001774189.1 | conjugal transfer protein TraO | - |
| LQ134_RS24645 (58781) | 58781..59764 | - | 984 | WP_001191879.1 | hypothetical protein | VF |
| LQ134_RS24650 (59775) | 59775..60467 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| LQ134_RS24655 (60464) | 60464..60811 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| LQ134_RS24660 (60829) | 60829..64596 | - | 3768 | WP_052983927.1 | DUF5710 domain-containing protein | - |
| LQ134_RS24665 (64687) | 64687..65238 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| LQ134_RS24670 (65253) | 65253..65543 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| LQ134_RS24675 (65540) | 65540..66688 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| LQ134_RS24680 (66685) | 66685..67503 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| LQ134_RS24685 (67500) | 67500..67958 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| LQ134_RS24690 (68353) | 68353..68937 | - | 585 | WP_000977523.1 | histidine phosphatase family protein | - |
| LQ134_RS24695 (68997) | 68997..70199 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| LQ134_RS24700 (70284) | 70284..71108 | - | 825 | WP_001238935.1 | conjugal transfer protein TraE | - |
| LQ134_RS24705 (71259) | 71259..72413 | - | 1155 | WP_001139958.1 | site-specific integrase | - |
| LQ134_RS24710 (74047) | 74047..75471 | - | 1425 | WP_001389385.1 | hypothetical protein | VF |
| LQ134_RS24715 (75471) | 75471..76127 | - | 657 | WP_001193554.1 | hypothetical protein | VF |
| LQ134_RS24720 (76112) | 76112..76672 | - | 561 | WP_001774171.1 | hypothetical protein | VF |
| LQ134_RS24725 (76682) | 76682..77296 | - | 615 | WP_001542527.1 | hypothetical protein | VF |
| LQ134_RS24730 (77314) | 77314..78411 | - | 1098 | WP_001492931.1 | hypothetical protein | VF |
| LQ134_RS24735 (78424) | 78424..79977 | - | 1554 | WP_001492932.1 | hypothetical protein | VF |
| LQ134_RS24740 (79988) | 79988..80440 | - | 453 | WP_001247870.1 | hypothetical protein | VF |
| LQ134_RS24745 (80427) | 80427..81722 | - | 1296 | WP_001774172.1 | type 4b pilus protein PilO2 | - |
| LQ134_RS24750 (81715) | 81715..83397 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| LQ134_RS24755 (83411) | 83411..83848 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| LQ134_RS24760 (83848) | 83848..84915 | - | 1068 | WP_001492935.1 | hypothetical protein | VF |
| LQ134_RS24765 (85539) | 85539..85835 | - | 297 | WP_000494780.1 | hypothetical protein | - |
| LQ134_RS24770 (86002) | 86002..86256 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| LQ134_RS24775 (86418) | 86418..86969 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| LQ134_RS24780 (87142) | 87142..87825 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| LQ134_RS24785 (88078) | 88078..88611 | - | 534 | WP_001306770.1 | transcription termination/antitermination NusG family protein | - |
| LQ134_RS24790 (89053) | 89053..89340 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| LQ134_RS24795 (89258) | 89258..89488 | - | 231 | WP_228772074.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|