MGE detailed information
MGE type: Prophage MGE length: 70403 bp
Accession: NZ_OW968124 Location: 4074342..4144744 Organism: Escherichia coli isolate 10 Replicon: chromosome
Accession: NZ_OW968124 Location: 4074342..4144744 Organism: Escherichia coli isolate 10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ159_RS19725 (4069461) | 4069461..4070534 | - | 1074 | WP_001543400.1 | patatin family protein | - |
| LQ159_RS19730 (4070656) | 4070656..4070817 | - | 162 | WP_000490275.1 | DUF1328 domain-containing protein | - |
| LQ159_RS19735 (4070944) | 4070944..4071549 | - | 606 | WP_001295410.1 | molecular chaperone OsmY | - |
| LQ159_RS19740 (4071942) | 4071942..4073528 | - | 1587 | WP_000202564.1 | peptide chain release factor 3 | - |
| LQ159_RS19745 (4073748) | 4073748..4074008 | + | 261 | WP_001217545.1 | DinI-like family protein | - |
| LQ159_RS19750 (4074342) | 4074342..4075970 | + | 1629 | WP_223370176.1 | hypothetical protein | VF |
| LQ159_RS19755 (4076144) | 4076144..4076386 | - | 243 | Protein_3885 | recombinase family protein | - |
| LQ159_RS19760 (4076415) | 4076415..4076546 | - | 132 | Protein_3886 | tail fiber assembly protein | - |
| LQ159_RS19765 (4076598) | 4076598..4077482 | - | 885 | WP_223372511.1 | tail fiber domain-containing protein | - |
| LQ159_RS19770 (4079379) | 4079379..4080371 | - | 993 | Protein_3888 | prophage tail fiber N-terminal domain-containing protein | - |
| LQ159_RS19775 (4080436) | 4080436..4081035 | - | 600 | WP_032329899.1 | Outer membrane protein X | VF |
| LQ159_RS19780 (4081106) | 4081106..4084603 | - | 3498 | WP_230163684.1 | host specificity protein J | - |
| LQ159_RS19785 (4084664) | 4084664..4085311 | - | 648 | WP_106509557.1 | tail assembly protein | - |
| LQ159_RS19790 (4085209) | 4085209..4085952 | - | 744 | WP_077129139.1 | C40 family peptidase | - |
| LQ159_RS19795 (4085958) | 4085958..4086656 | - | 699 | WP_142436504.1 | phage minor tail protein L | - |
| LQ159_RS19800 (4086666) | 4086666..4086995 | - | 330 | WP_000447253.1 | phage tail protein | - |
| LQ159_RS19805 (4086995) | 4086995..4090060 | - | 3066 | WP_000371987.1 | phage tail tape measure protein | - |
| LQ159_RS19810 (4090032) | 4090032..4090361 | - | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| LQ159_RS19815 (4090370) | 4090370..4090756 | - | 387 | WP_001300035.1 | phage minor tail protein G | - |
| LQ159_RS19820 (4090817) | 4090817..4091560 | - | 744 | WP_000211109.1 | phage tail protein | - |
| LQ159_RS19825 (4091572) | 4091572..4091973 | - | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| LQ159_RS19830 (4091970) | 4091970..4092548 | - | 579 | WP_000677106.1 | phage tail protein | - |
| LQ159_RS19835 (4092560) | 4092560..4092835 | - | 276 | WP_001283144.1 | DNA breaking-rejoining protein | - |
| LQ159_RS19840 (4092828) | 4092828..4093151 | - | 324 | WP_001097050.1 | DUF2190 family protein | - |
| LQ159_RS19845 (4093238) | 4093238..4095265 | - | 2028 | WP_001136590.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| LQ159_RS19850 (4095210) | 4095210..4096718 | - | 1509 | WP_000985945.1 | phage portal protein | - |
| LQ159_RS19855 (4096718) | 4096718..4096930 | - | 213 | WP_001072975.1 | hypothetical protein | - |
| LQ159_RS19860 (4096927) | 4096927..4099029 | - | 2103 | WP_000934119.1 | phage terminase large subunit family protein | - |
| LQ159_RS19865 (4099029) | 4099029..4099523 | - | 495 | WP_000373425.1 | DUF1441 family protein | - |
| LQ159_RS19870 (4100199) | 4100199..4100351 | - | 153 | WP_001139680.1 | hypothetical protein | - |
| LQ159_RS19875 (4100339) | 4100339..4100806 | - | 468 | WP_001442864.1 | lysis protein | - |
| LQ159_RS19880 (4100803) | 4100803..4101300 | - | 498 | WP_001135251.1 | lysozyme RrrD | - |
| LQ159_RS19885 (4101300) | 4101300..4101515 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| LQ159_RS19890 (4101583) | 4101583..4102635 | - | 1053 | WP_000799653.1 | site-specific DNA-methyltransferase | - |
| LQ159_RS19895 (4102786) | 4102786..4102989 | - | 204 | WP_000595432.1 | hypothetical protein | - |
| LQ159_RS19900 (4103142) | 4103142..4103894 | - | 753 | Protein_3914 | IS4 family transposase IS10R | Transposase |
| LQ159_RS19905 (4103986) | 4103986..4105214 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| LQ159_RS19910 (4105225) | 4105225..4105686 | - | 462 | Protein_3916 | IS4 family transposase IS10R | Transposase |
| LQ159_RS19915 (4105887) | 4105887..4106312 | - | 426 | WP_000217632.1 | hypothetical protein | - |
| LQ159_RS19920 (4106593) | 4106593..4107345 | - | 753 | WP_001047105.1 | antitermination protein | - |
| LQ159_RS19925 (4107359) | 4107359..4108348 | - | 990 | WP_001360050.1 | DUF968 domain-containing protein | - |
| LQ159_RS19930 (4108356) | 4108356..4109165 | - | 810 | WP_001061379.1 | KilA-N domain-containing protein | - |
| LQ159_RS19935 (4109185) | 4109185..4109574 | - | 390 | WP_000767103.1 | RusA family crossover junction endodeoxyribonuclease | - |
| LQ159_RS19940 (4109571) | 4109571..4109897 | - | 327 | WP_000210170.1 | LexA family transcriptional regulator | - |
| LQ159_RS19945 (4109894) | 4109894..4110547 | - | 654 | WP_001442792.1 | phage N-6-adenine-methyltransferase | - |
| LQ159_RS19950 (4110547) | 4110547..4111041 | - | 495 | WP_072185076.1 | PerC family transcriptional regulator | - |
| LQ159_RS19955 (4111038) | 4111038..4111856 | - | 819 | WP_000061506.1 | helix-turn-helix domain-containing protein | - |
| LQ159_RS19960 (4111853) | 4111853..4112089 | - | 237 | WP_000933949.1 | hypothetical protein | - |
| LQ159_RS19965 (4112082) | 4112082..4112660 | - | 579 | WP_224271416.1 | ash family protein | - |
| LQ159_RS19970 (4112590) | 4112590..4112769 | - | 180 | WP_016570095.1 | DUF4222 domain-containing protein | - |
| LQ159_RS19975 (4112915) | 4112915..4113466 | - | 552 | WP_000515860.1 | protein YmfL | - |
| LQ159_RS19980 (4113510) | 4113510..4113710 | - | 201 | WP_000649477.1 | YdaS family helix-turn-helix protein | - |
| LQ159_RS19985 (4113801) | 4113801..4114475 | + | 675 | WP_000859460.1 | LexA family transcriptional regulator | - |
| LQ159_RS19990 (4115221) | 4115221..4115583 | + | 363 | WP_000135682.1 | protein YfdP | - |
| LQ159_RS19995 (4115649) | 4115649..4116473 | + | 825 | WP_000081287.1 | DUF2303 family protein | - |
| LQ159_RS20000 (4116602) | 4116602..4117138 | + | 537 | WP_000008217.1 | 5'-deoxynucleotidase | - |
| LQ159_RS20005 (4117129) | 4117129..4118007 | + | 879 | WP_000335011.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| LQ159_RS20010 (4118004) | 4118004..4118351 | + | 348 | WP_000206056.1 | hypothetical protein | - |
| LQ159_RS20015 (4118828) | 4118828..4120069 | - | 1242 | WP_015364392.1 | hypothetical protein | - |
| LQ159_RS20020 (4120254) | 4120254..4121477 | - | 1224 | WP_001218286.1 | Prophage integrase IntA ; Integrase | Integrase |
| LQ159_RS20025 (4121863) | 4121863..4122540 | - | 678 | WP_000870712.1 | pyrimidine 5'-nucleotidase | - |
| LQ159_RS20030 (4122555) | 4122555..4123001 | - | 447 | WP_001092461.1 | [Ribosomal protein S18]-alanine N-acetyltransferase | VF |
| LQ159_RS20035 (4122970) | 4122970..4123383 | - | 414 | WP_000204017.1 | DNA polymerase III subunit psi | - |
| LQ159_RS20040 (4123486) | 4123486..4124517 | + | 1032 | WP_001272323.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| LQ159_RS20060 (4125290) | 4125290..4125526 | - | 237 | WP_001445803.1 | DUF1435 domain-containing protein | - |
| LQ159_RS20065 (4125667) | 4125667..4126455 | + | 789 | WP_025693515.1 | siderophore-iron reductase FhuF | - |
| LQ159_RS20070 (4126493) | 4126493..4127170 | - | 678 | WP_001298690.1 | Transcriptional activator protein BglJ | VF |
| LQ159_RS20075 (4127128) | 4127128..4127853 | - | 726 | WP_000936635.1 | Putative transcription factor YjjQ | VF |
| LQ159_RS20080 (4128472) | 4128472..4129242 | + | 771 | WP_001340933.1 | threonine/serine exporter ThrE family protein | - |
| LQ159_RS20085 (4129233) | 4129233..4129706 | + | 474 | WP_000538191.1 | threonine/serine exporter | - |
| LQ159_RS20090 (4129814) | 4129814..4130353 | + | 540 | WP_000098818.1 | primosomal protein DnaT | - |
| LQ159_RS20095 (4130356) | 4130356..4131093 | + | 738 | WP_000799911.1 | IS21 family transposase ISSme2 | Transposase |
| LQ159_RS20100 (4131142) | 4131142..4131636 | + | 495 | WP_001308243.1 | DUF2501 domain-containing protein YjjA | - |
| LQ159_RS20105 (4131890) | 4131890..4134181 | + | 2292 | WP_025693514.1 | phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | - |
| LQ159_RS20110 (4134321) | 4134321..4135343 | - | 1023 | WP_000106043.1 | L-galactonate oxidoreductase | - |
| LQ159_RS20115 (4135482) | 4135482..4136396 | + | 915 | WP_000091572.1 | GntR family transcriptional regulator | - |
| LQ159_RS20120 (4136611) | 4136611..4137972 | + | 1362 | WP_000410144.1 | MFS transporter | - |
| LQ159_RS20125 (4138021) | 4138021..4139685 | - | 1665 | WP_000919540.1 | Methyl-accepting chemotaxis protein I | VF |
| LQ159_RS20130 (4140062) | 4140062..4142212 | + | 2151 | WP_001295524.1 | pyruvate/proton symporter BtsT | - |
| LQ159_RS20135 (4142262) | 4142262..4142465 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| LQ159_RS20140 (4142476) | 4142476..4143432 | + | 957 | WP_001297640.1 | GTPase | - |
| LQ159_RS20145 (4143466) | 4143466..4143768 | - | 303 | WP_000063156.1 | BrnA antitoxin family protein | Antitoxin Detail |
| LQ159_RS20150 (4143755) | 4143755..4144042 | - | 288 | WP_001297643.1 | BrnT family toxin | Toxin Detail |
| LQ159_RS20155 (4144241) | 4144241..4144938 | - | 698 | Protein_3962 | IS1 family transposase | - |
| LQ159_RS20160 (4144995) | 4144995..4145090 | + | 96 | Protein_3963 | dienelactone hydrolase family protein | - |
| LQ159_RS20165 (4145236) | 4145236..4146468 | + | 1233 | WP_063104094.1 | multidrug efflux MFS transporter MdtM | - |
| LQ159_RS20170 (4146509) | 4146509..4147789 | + | 1281 | WP_001037380.1 | DUF445 domain-containing protein | - |
| LQ159_RS20175 (4147905) | 4147905..4149056 | + | 1152 | WP_001300012.1 | double-cubane-cluster-containing anaerobic reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|