MGE detailed information
MGE type: Conjugative plasmid MGE length: 154854 bp
Accession: NZ_OW968012 Location: 1..154854 Organism: Escherichia coli isolate 58 Replicon: plasmid P1
Accession: NZ_OW968012 Location: 1..154854 Organism: Escherichia coli isolate 58 Replicon: plasmid P1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ149_RS22840 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| LQ149_RS22845 (1263) | 1263..2003 | - | 741 | WP_001514245.1 | tyrosine-type recombinase/integrase | - |
| LQ149_RS22850 (2124) | 2124..2312 | - | 189 | WP_001332052.1 | hypothetical protein | - |
| LQ149_RS22855 (2686) | 2686..3588 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| LQ149_RS22860 (3657) | 3657..4766 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| LQ149_RS22865 (5199) | 5199..6152 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| LQ149_RS22870 (7449) | 7449..7628 | - | 180 | Protein_6 | integrase core domain-containing protein | - |
| LQ149_RS22875 (7767) | 7767..8980 | + | 1214 | WP_162842477.1 | IS3 family transposase IS629 | Transposase |
| LQ149_RS22880 (9128) | 9128..9453 | - | 326 | Protein_8 | IS3 family transposase ISLad1 | Transposase |
| LQ149_RS22885 (9552) | 9552..11060 | - | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| LQ149_RS22890 (11759) | 11759..12109 | + | 351 | Protein_10 | IS3 family transposase | - |
| LQ149_RS22895 (12704) | 12704..13891 | + | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
| LQ149_RS22900 (13888) | 13888..15828 | + | 1941 | WP_000733252.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| LQ149_RS22905 (15832) | 15832..17202 | + | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
| LQ149_RS22910 (17676) | 17676..17870 | + | 195 | Protein_14 | IS200-IS605 family transposase IS200C | Transposase |
| LQ149_RS22915 (17999) | 17999..18940 | - | 942 | WP_000974762.1 | hypothetical protein | - |
| LQ149_RS22920 (19175) | 19175..20564 | - | 1390 | Protein_16 | ISNCY family transposase ISKpn21 | Transposase |
| LQ149_RS22925 (20874) | 20874..21023 | - | 150 | Protein_17 | IS3 family transposase IS2 | Transposase |
| LQ149_RS22930 (21201) | 21201..22394 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| LQ149_RS22940 (25473) | 25473..25766 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| LQ149_RS22945 (25824) | 25824..26023 | - | 200 | Protein_21 | lysis protein | - |
| LQ149_RS22950 (26577) | 26577..27601 | + | 1025 | Protein_22 | integrase core domain-containing protein | - |
| LQ149_RS22955 (28912) | 28912..30027 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| LQ149_RS22960 (30167) | 30167..33826 | + | 3660 | WP_001442133.1 | Multidrug efflux ATP-binding/permease protein | VF |
| LQ149_RS22965 (33930) | 33930..35159 | + | 1230 | WP_000933672.1 | Enterochelin esterase | VF |
| LQ149_RS22970 (35244) | 35244..36200 | + | 957 | WP_000271277.1 | Ferri-bacillibactin esterase BesA | VF |
| LQ149_RS22975 (36245) | 36245..38422 | - | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| LQ149_RS22980 (39277) | 39277..40311 | - | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| LQ149_RS22985 (40492) | 40492..40793 | + | 302 | Protein_29 | hypothetical protein | - |
| LQ149_RS22990 (40871) | 40871..41164 | - | 294 | WP_000269327.1 | DUF6404 family protein | - |
| LQ149_RS22995 (41332) | 41332..41457 | - | 126 | Protein_31 | type II toxin-antitoxin system toxin YacB | - |
| LQ149_RS23000 (41457) | 41457..41725 | - | 269 | Protein_32 | type II toxin-antitoxin system antitoxin YacA | - |
| LQ149_RS23005 (42336) | 42336..43610 | + | 1275 | WP_000489608.1 | HlyD family secretion protein | - |
| LQ149_RS23010 (43603) | 43603..45699 | + | 2097 | WP_000184924.1 | microcin H47 export transporter peptidase/ATP-binding subunit MchF | - |
| LQ149_RS23015 (45869) | 45869..46180 | - | 312 | WP_001259758.1 | colicin V | - |
| LQ149_RS23020 (46158) | 46158..46394 | - | 237 | WP_001323890.1 | colicin V immunity protein | - |
| LQ149_RS23025 (46513) | 46513..46956 | + | 444 | WP_001323891.1 | dehydrogenase | - |
| LQ149_RS23030 (46928) | 46928..47332 | + | 405 | WP_001389361.1 | hypothetical protein | - |
| LQ149_RS23035 (47334) | 47334..47603 | + | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| LQ149_RS23040 (47600) | 47600..47866 | + | 267 | WP_001017350.1 | FAD-dependent oxidoreductase | - |
| LQ149_RS23045 (47922) | 47922..48374 | - | 453 | WP_000670963.1 | acyltransferase | - |
| LQ149_RS23050 (48667) | 48667..48927 | + | 261 | WP_000343091.1 | hypothetical protein | - |
| LQ149_RS23055 (48924) | 48924..49514 | + | 591 | WP_001518980.1 | hypothetical protein | - |
| LQ149_RS23060 (49576) | 49576..49791 | - | 216 | Protein_44 | DUF6404 family protein | - |
| LQ149_RS23065 (49920) | 49920..50255 | + | 336 | WP_001080729.1 | colicin 1A immunity protein | - |
| LQ149_RS23070 (50277) | 50277..52157 | - | 1881 | WP_001283335.1 | colicin Ia central receptor-binding domain-containing protein | - |
| LQ149_RS23075 (52343) | 52343..53191 | - | 849 | WP_001057989.1 | 3'-5' exonuclease | - |
| LQ149_RS23080 (53237) | 53237..53515 | - | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| LQ149_RS23085 (53515) | 53515..53784 | - | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| LQ149_RS23090 (54428) | 54428..56179 | - | 1752 | Protein_50 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LQ149_RS23095 (56183) | 56183..56575 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| LQ149_RS23100 (56713) | 56713..57597 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| LQ149_RS23105 (57629) | 57629..58828 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| LQ149_RS23110 (58934) | 58934..59584 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| LQ149_RS23115 (59616) | 59616..59858 | - | 243 | WP_000844627.1 | transposase | - |
| LQ149_RS23120 (59916) | 59916..62882 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LQ149_RS23125 (62886) | 62886..63446 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| LQ149_RS23130 (63622) | 63622..63972 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| LQ149_RS23135 (64175) | 64175..65188 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| LQ149_RS23140 (65344) | 65344..65817 | + | 474 | WP_001317507.1 | Dihydrofolate reductase type 1 | ARG |
| LQ149_RS23145 (65969) | 65969..66673 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LQ149_RS23150 (66843) | 66843..67124 | - | 282 | Protein_62 | transposase zinc-binding domain-containing protein | - |
| LQ149_RS23155 (67271) | 67271..68131 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| LQ149_RS23160 (68314) | 68314..68652 | - | 339 | Protein_64 | Tn3 family transposase TnpR_Tn3 | Transposase |
| LQ149_RS23165 (68716) | 68716..69420 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LQ149_RS23170 (69470) | 69470..70189 | + | 720 | Protein_66 | helicase RepA family protein | - |
| LQ149_RS23175 (70176) | 70176..71078 | + | 903 | WP_001518958.1 | replication protein C, IncQ-type | - |
| LQ149_RS23180 (71335) | 71335..72150 | + | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| LQ149_RS23185 (72211) | 72211..73014 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| LQ149_RS23190 (73014) | 73014..73850 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| LQ149_RS23195 (73911) | 73911..74615 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LQ149_RS23200 (74680) | 74680..75930 | - | 1251 | Protein_72 | transposase | - |
| LQ149_RS23205 (76005) | 76005..76673 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| LQ149_RS23210 (76709) | 76709..76945 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| LQ149_RS23215 (76942) | 76942..77304 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| LQ149_RS23220 (77322) | 77322..79016 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| LQ149_RS23225 (79068) | 79068..79490 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| LQ149_RS23230 (79526) | 79526..79801 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| LQ149_RS23235 (79815) | 79815..80165 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| LQ149_RS23240 (80237) | 80237..80671 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| LQ149_RS23245 (81015) | 81015..81872 | - | 858 | WP_001514234.1 | incFII family plasmid replication initiator RepA | - |
| LQ149_RS23250 (81865) | 81865..81939 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| LQ149_RS23255 (82164) | 82164..82424 | - | 261 | WP_113988281.1 | replication regulatory protein RepA | - |
| LQ149_RS23260 (82664) | 82664..83254 | - | 591 | WP_000766816.1 | DUF2726 domain-containing protein | - |
| LQ149_RS23265 (83293) | 83293..83502 | - | 210 | WP_001514235.1 | hemolysin expression modulator Hha | - |
| LQ149_RS23270 (83548) | 83548..84009 | - | 462 | WP_001514236.1 | thermonuclease family protein | - |
| LQ149_RS23275 (84254) | 84254..84466 | - | 213 | WP_001371875.1 | ANR family transcriptional regulator | - |
| LQ149_RS23280 (84599) | 84599..85159 | - | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| LQ149_RS23285 (85262) | 85262..86122 | - | 861 | WP_000704522.1 | putative protein YcjY | VF |
| LQ149_RS23290 (86181) | 86181..86927 | - | 747 | WP_000205766.1 | conjugal transfer pilus acetylase TraX | - |
| LQ149_RS23295 (86947) | 86947..92217 | - | 5271 | WP_001514237.1 | Multifunctional conjugation protein TraI | Relaxase |
| LQ149_RS23300 (92217) | 92217..94370 | - | 2154 | WP_001369365.1 | type IV conjugative transfer system coupling protein TraD | - |
| LQ149_RS23305 (94623) | 94623..95354 | - | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| LQ149_RS23310 (95368) | 95368..95877 | - | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| LQ149_RS23315 (95874) | 95874..98699 | - | 2826 | WP_001007045.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| LQ149_RS23320 (98696) | 98696..100069 | - | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| LQ149_RS23325 (100069) | 100069..100431 | - | 363 | WP_010379880.1 | P-type conjugative transfer protein TrbJ | - |
| LQ149_RS23330 (100361) | 100361..100906 | - | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| LQ149_RS23335 (100893) | 100893..101177 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LQ149_RS23340 (101296) | 101296..101643 | - | 348 | WP_001287677.1 | conjugal transfer protein TrbA | - |
| LQ149_RS23345 (101659) | 101659..102402 | - | 744 | WP_001514239.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| LQ149_RS23350 (102395) | 102395..102652 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| LQ149_RS23355 (102679) | 102679..104487 | - | 1809 | WP_000821846.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| LQ149_RS23360 (104484) | 104484..105122 | - | 639 | WP_000777693.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| LQ149_RS23365 (105131) | 105131..106123 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| LQ149_RS23370 (106120) | 106120..106752 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| LQ149_RS23375 (106749) | 106749..107135 | - | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| LQ149_RS23380 (107132) | 107132..109759 | - | 2628 | WP_001064252.1 | type IV secretion system protein TraC | - |
| LQ149_RS23385 (109919) | 109919..110140 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| LQ149_RS23390 (110275) | 110275..110790 | - | 516 | WP_000809841.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LQ149_RS23395 (110787) | 110787..111038 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| LQ149_RS23400 (111050) | 111050..111247 | - | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| LQ149_RS23405 (111234) | 111234..111824 | - | 591 | WP_000002796.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| LQ149_RS23410 (111814) | 111814..113241 | - | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| LQ149_RS23415 (113241) | 113241..113969 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| LQ149_RS23420 (113956) | 113956..114522 | - | 567 | WP_000399785.1 | type IV conjugative transfer system protein TraE | - |
| LQ149_RS23425 (114544) | 114544..114855 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| LQ149_RS23430 (114870) | 114870..115235 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| LQ149_RS23435 (115268) | 115268..115669 | - | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| LQ149_RS23440 (115762) | 115762..116451 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| LQ149_RS23445 (116638) | 116638..117021 | - | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LQ149_RS23450 (117436) | 117436..117945 | + | 510 | WP_000759163.1 | hypothetical protein | VF |
| LQ149_RS23455 (118241) | 118241..119062 | - | 822 | WP_001234468.1 | DUF932 domain-containing protein | - |
| LQ149_RS23460 (119181) | 119181..119468 | - | 288 | WP_000107520.1 | hypothetical protein | - |
| LQ149_RS23465 (119769) | 119769..120066 | + | 298 | Protein_125 | hypothetical protein | - |
| LQ149_RS23470 (120367) | 120367..120489 | - | 123 | WP_223195199.1 | Hok/Gef family protein | - |
| LQ149_RS23475 (120434) | 120434..120547 | - | 114 | Protein_127 | DUF5431 family protein | - |
| - (120581) | 120581..120792 | + | 212 | NuclAT_0 | - | - |
| - (120581) | 120581..120792 | - | 212 | NuclAT_0 | - | - |
| - (120581) | 120581..120792 | - | 212 | NuclAT_0 | - | - |
| - (120581) | 120581..120792 | - | 212 | NuclAT_0 | - | - |
| - (120581) | 120581..120792 | - | 212 | NuclAT_0 | - | - |
| LQ149_RS23480 (120737) | 120737..121523 | - | 787 | Protein_128 | plasmid SOS inhibition protein A | - |
| LQ149_RS23485 (121520) | 121520..121954 | - | 435 | WP_000845922.1 | conjugation system SOS inhibitor PsiB | - |
| LQ149_RS23490 (122009) | 122009..123967 | - | 1959 | WP_000117202.1 | ParB/RepB/Spo0J family partition protein | - |
| LQ149_RS23495 (124031) | 124031..124264 | - | 234 | WP_000005988.1 | DUF905 family protein | - |
| LQ149_RS23500 (124362) | 124362..124859 | - | 498 | Protein_132 | single-stranded DNA-binding protein | - |
| LQ149_RS23505 (125160) | 125160..125579 | + | 420 | WP_015056142.1 | hypothetical protein | - |
| LQ149_RS23510 (125665) | 125665..126228 | - | 564 | WP_001332335.1 | class I SAM-dependent methyltransferase | - |
| LQ149_RS23515 (126276) | 126276..127637 | - | 1362 | WP_000170680.1 | DUF3560 domain-containing protein | - |
| LQ149_RS23520 (127689) | 127689..127919 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| LQ149_RS23525 (128436) | 128436..128689 | + | 254 | Protein_137 | hypothetical protein | - |
| LQ149_RS23530 (128913) | 128913..129095 | - | 183 | WP_001027505.1 | hypothetical protein | - |
| LQ149_RS23535 (129095) | 129095..129556 | - | 462 | WP_042007484.1 | DUF1380 family protein | - |
| LQ149_RS23540 (129556) | 129556..129981 | - | 426 | WP_001198922.1 | antirestriction protein | - |
| LQ149_RS23545 (130383) | 130383..131354 | + | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
| LQ149_RS23550 (131615) | 131615..131827 | - | 213 | WP_000092896.1 | hypothetical protein | - |
| LQ149_RS23555 (131840) | 131840..132415 | - | 576 | WP_000343071.1 | hypothetical protein | - |
| LQ149_RS23560 (132484) | 132484..132822 | - | 339 | WP_001513511.1 | hypothetical protein | - |
| LQ149_RS23565 (132828) | 132828..132997 | - | 170 | Protein_145 | hypothetical protein | - |
| LQ149_RS23570 (133462) | 133462..134433 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| LQ149_RS23575 (134433) | 134433..135599 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| LQ149_RS23585 (137121) | 137121..139322 | - | 2202 | WP_000973517.1 | Ferric aerobactin receptor | VF |
| LQ149_RS23590 (139348) | 139348..140681 | - | 1334 | Protein_150 | L-lysine N6-monooxygenase | VF |
| LQ149_RS23595 (140678) | 140678..142420 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| LQ149_RS23600 (142420) | 142420..143367 | - | 948 | WP_000011907.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| LQ149_RS23605 (143368) | 143368..145092 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| LQ149_RS23610 (145228) | 145228..146421 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| LQ149_RS23615 (146801) | 146801..147181 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| LQ149_RS23620 (147522) | 147522..147935 | - | 414 | Protein_156 | phosphopyruvate hydratase | - |
| LQ149_RS23625 (147933) | 147933..148190 | + | 258 | Protein_157 | Tn3 family transposase | - |
| LQ149_RS23630 (148424) | 148424..149281 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| LQ149_RS23635 (149278) | 149278..150135 | - | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| LQ149_RS23640 (150132) | 150132..150959 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| LQ149_RS23645 (150959) | 150959..151873 | - | 915 | WP_001514243.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| LQ149_RS23650 (152229) | 152229..152926 | + | 698 | WP_223155668.1 | IS1 family transposase IS1S | Transposase |
| LQ149_RS23655 (153106) | 153106..153619 | - | 514 | Protein_163 | DUF4113 domain-containing protein | - |
| LQ149_RS23660 (153680) | 153680..153784 | - | 105 | Protein_164 | AAA family ATPase | - |
| LQ149_RS23665 (153786) | 153786..154109 | - | 324 | Protein_165 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|