MGE detailed information
MGE type: Genomic_island MGE length: 17600 bp
Accession: NZ_OW968011 Location: 3987456..4005055 Organism: Escherichia coli isolate 58 Replicon: chromosome
Accession: NZ_OW968011 Location: 3987456..4005055 Organism: Escherichia coli isolate 58 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ149_RS19010 (3982672) | 3982672..3986907 | + | 4236 | WP_230146748.1 | RHS element core protein | - |
| LQ149_RS19015 (3986885) | 3986885..3987277 | + | 393 | WP_001101835.1 | hypothetical protein | - |
| LQ149_RS19020 (3987456) | 3987456..3988592 | + | 1137 | Protein_3710 | ISAs1 family transposase ISEc1 | Transposase |
| LQ149_RS19025 (3988622) | 3988622..3989074 | + | 453 | WP_000960005.1 | hypothetical protein | - |
| LQ149_RS19030 (3989340) | 3989340..3989534 | + | 195 | WP_000990552.1 | DUF3969 family protein | - |
| LQ149_RS19035 (3989648) | 3989648..3991875 | + | 2228 | Protein_3713 | Protein RhsD | VF |
| LQ149_RS19040 (3991911) | 3991911..3992825 | + | 915 | Protein_3714 | Protein RhsD | VF |
| LQ149_RS24345 (3993259) | 3993259..3993741 | + | 483 | WP_000939262.1 | protein YdcD | - |
| LQ149_RS19050 (3993656) | 3993656..3993841 | - | 186 | WP_122985282.1 | hypothetical protein | - |
| LQ149_RS19055 (3993922) | 3993922..3995048 | + | 1127 | Protein_3717 | ISAs1 family transposase ISEc26 | Transposase |
| LQ149_RS19060 (3995151) | 3995151..3996287 | + | 1137 | Protein_3718 | ISAs1 family transposase ISEc1 | Transposase |
| LQ149_RS19065 (3996329) | 3996329..3997099 | - | 771 | WP_001118038.1 | 2-oxoglutaramate amidase | - |
| LQ149_RS19070 (3997280) | 3997280..3997726 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| LQ149_RS19075 (3997769) | 3997769..4000213 | - | 2445 | WP_000973081.1 | Acyl-coenzyme A dehydrogenase | VF |
| LQ149_RS19080 (4000453) | 4000453..4001031 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| LQ149_RS19085 (4001237) | 4001237..4002004 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| LQ149_RS19090 (4001975) | 4001975..4002715 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| LQ149_RS19095 (4002871) | 4002871..4003149 | - | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| LQ149_RS19100 (4003152) | 4003152..4003412 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| LQ149_RS19105 (4003598) | 4003598..4004371 | + | 774 | WP_000543895.1 | hypothetical protein | VF |
| LQ149_RS19110 (4004428) | 4004428..4004784 | - | 357 | WP_001030483.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| LQ149_RS19115 (4004777) | 4004777..4005055 | - | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| LQ149_RS19120 (4005160) | 4005160..4006872 | - | 1713 | Protein_3730 | flagellar biosynthesis protein FlhA | - |
| LQ149_RS19125 (4006844) | 4006844..4007629 | + | 786 | WP_000207575.1 | putative lateral flagellar export/assembly protein LafU | - |
| LQ149_RS19130 (4007700) | 4007700..4008755 | + | 1056 | WP_001226183.1 | DNA polymerase IV | - |
| LQ149_RS19135 (4008752) | 4008752..4009204 | + | 453 | WP_001059855.1 | GNAT family N-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|