MGE detailed information
MGE type: Prophage MGE length: 51029 bp
Accession: NZ_OW967966 Location: 3307199..3358227 Organism: Escherichia coli isolate 648 Replicon: chromosome
Accession: NZ_OW967966 Location: 3307199..3358227 Organism: Escherichia coli isolate 648 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ127_RS16120 (3302228) | 3302228..3303130 | - | 903 | WP_000684321.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| LQ127_RS16125 (3303191) | 3303191..3303913 | - | 723 | WP_024946543.1 | nitroreductase NfsA | - |
| LQ127_RS16130 (3303897) | 3303897..3304184 | - | 288 | WP_022645436.1 | DUF1418 family protein | - |
| LQ127_RS16135 (3304344) | 3304344..3304601 | + | 258 | WP_001195231.1 | glutaredoxin 1 | - |
| LQ127_RS16140 (3304631) | 3304631..3305008 | - | 378 | WP_000681108.1 | inner membrane protein YbjM | - |
| LQ127_RS16145 (3305278) | 3305278..3306963 | + | 1686 | WP_001024876.1 | aspartate:alanine antiporter | - |
| LQ127_RS16150 (3307199) | 3307199..3307417 | - | 219 | WP_000972391.1 | ogr/Delta-like zinc finger family protein | - |
| LQ127_RS16155 (3307508) | 3307508..3308608 | - | 1101 | WP_022645435.1 | phage late control D family protein | - |
| LQ127_RS16160 (3308605) | 3308605..3309090 | - | 486 | WP_022645434.1 | phage tail protein | - |
| LQ127_RS16165 (3309087) | 3309087..3312164 | - | 3078 | WP_022645433.1 | phage tail tape measure protein | - |
| LQ127_RS16170 (3312157) | 3312157..3312276 | - | 120 | WP_000763311.1 | GpE family phage tail protein | - |
| LQ127_RS16175 (3312291) | 3312291..3312593 | - | 303 | WP_022645432.1 | phage tail assembly protein | - |
| LQ127_RS16180 (3312648) | 3312648..3313163 | - | 516 | WP_001207660.1 | phage major tail tube protein | - |
| LQ127_RS16185 (3313173) | 3313173..3314345 | - | 1173 | WP_000046146.1 | phage tail sheath protein | - |
| LQ127_RS16190 (3314479) | 3314479..3315081 | - | 603 | WP_022645431.1 | tail fiber assembly protein | - |
| LQ127_RS16195 (3315081) | 3315081..3316622 | - | 1542 | WP_022645430.1 | phage tail protein | - |
| LQ127_RS16200 (3316619) | 3316619..3317224 | - | 606 | WP_022645429.1 | phage tail protein I | - |
| LQ127_RS16205 (3317217) | 3317217..3318125 | - | 909 | WP_022645428.1 | baseplate assembly protein | - |
| LQ127_RS16210 (3318112) | 3318112..3318471 | - | 360 | WP_000177597.1 | GPW/gp25 family protein | - |
| LQ127_RS16215 (3318468) | 3318468..3319046 | - | 579 | WP_000993764.1 | phage baseplate assembly protein V | - |
| LQ127_RS16220 (3319150) | 3319150..3319956 | + | 807 | WP_022645427.1 | DUF6216 family protein | - |
| LQ127_RS16225 (3319898) | 3319898..3320344 | - | 447 | WP_021522006.1 | phage virion morphogenesis protein | - |
| LQ127_RS16230 (3320337) | 3320337..3320768 | - | 432 | WP_001595569.1 | phage tail protein | - |
| LQ127_RS16235 (3320734) | 3320734..3320979 | - | 246 | WP_224053113.1 | Rz1-like lysis system protein LysC | - |
| LQ127_RS16240 (3320864) | 3320864..3321292 | - | 429 | WP_022645426.1 | Rz-like lysis system protein LysB | - |
| LQ127_RS16245 (3321289) | 3321289..3321666 | - | 378 | WP_022645425.1 | DNZ54_00345 family protein | - |
| LQ127_RS16250 (3321668) | 3321668..3322180 | - | 513 | WP_022645424.1 | lysozyme | - |
| LQ127_RS16255 (3322161) | 3322161..3322376 | - | 216 | WP_000171568.1 | phage holin | - |
| LQ127_RS16260 (3322380) | 3322380..3322583 | - | 204 | WP_000868175.1 | tail protein X | - |
| LQ127_RS16265 (3322583) | 3322583..3323047 | - | 465 | WP_000673523.1 | head completion/stabilization protein | - |
| LQ127_RS16270 (3323143) | 3323143..3323793 | - | 651 | WP_021534472.1 | terminase endonuclease subunit | - |
| LQ127_RS16275 (3323797) | 3323797..3324855 | - | 1059 | WP_000742503.1 | phage major capsid protein, P2 family | - |
| LQ127_RS16280 (3324872) | 3324872..3325705 | - | 834 | WP_022645423.1 | GPO family capsid scaffolding protein | - |
| LQ127_RS16285 (3325848) | 3325848..3327614 | + | 1767 | WP_022645422.1 | terminase ATPase subunit family protein | - |
| LQ127_RS16290 (3327614) | 3327614..3328648 | + | 1035 | WP_022645421.1 | phage portal protein | - |
| LQ127_RS16295 (3328685) | 3328685..3330466 | - | 1782 | WP_022645420.1 | DUF262 domain-containing protein | - |
| LQ127_RS16300 (3331000) | 3331000..3332058 | + | 1059 | WP_022645419.1 | hypothetical protein | - |
| LQ127_RS16305 (3332233) | 3332233..3332466 | - | 234 | WP_001217562.1 | DinI-like family protein | - |
| LQ127_RS16310 (3332477) | 3332477..3332665 | - | 189 | WP_001154434.1 | hypothetical protein | - |
| LQ127_RS16315 (3332819) | 3332819..3335233 | - | 2415 | WP_022645418.1 | replication endonuclease | - |
| LQ127_RS16320 (3335230) | 3335230..3336087 | - | 858 | WP_000104157.1 | DNA adenine methylase | - |
| LQ127_RS16325 (3336084) | 3336084..3336311 | - | 228 | WP_001399246.1 | TraR/DksA family transcriptional regulator | - |
| LQ127_RS16330 (3336311) | 3336311..3336544 | - | 234 | WP_001244228.1 | DUF2732 family protein | - |
| LQ127_RS16335 (3336612) | 3336612..3336953 | - | 342 | WP_001311552.1 | DUF5347 domain-containing protein | - |
| LQ127_RS16340 (3336917) | 3336917..3337117 | - | 201 | WP_000956182.1 | DUF2724 domain-containing protein | - |
| LQ127_RS16345 (3337125) | 3337125..3337634 | - | 510 | WP_022645417.1 | phage regulatory CII family protein | - |
| LQ127_RS16350 (3337667) | 3337667..3337888 | - | 222 | WP_000188448.1 | hypothetical protein | - |
| LQ127_RS16355 (3337984) | 3337984..3338580 | + | 597 | WP_022645416.1 | phage repressor protein CI | - |
| LQ127_RS16360 (3338601) | 3338601..3340277 | + | 1677 | WP_022645415.1 | DUF4041 domain-containing protein | - |
| LQ127_RS16365 (3340360) | 3340360..3341412 | + | 1053 | WP_001595551.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LQ127_RS16370 (3341517) | 3341517..3342053 | - | 537 | WP_001361715.1 | DNA-binding transcriptional regulator RcdA | - |
| LQ127_RS16375 (3342137) | 3342137..3343345 | + | 1209 | WP_000217862.1 | MFS transporter | - |
| LQ127_RS16380 (3343345) | 3343345..3344160 | + | 816 | WP_001305939.1 | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase | - |
| LQ127_RS16385 (3344246) | 3344246..3344530 | + | 285 | WP_000605480.1 | protein YbjH | - |
| LQ127_RS16390 (3344571) | 3344571..3345803 | - | 1233 | WP_001602067.1 | Multidrug transporter MdfA | ARG |
| LQ127_RS16395 (3346088) | 3346088..3346684 | + | 597 | WP_001301859.1 | undecaprenyl-diphosphate phosphatase | - |
| LQ127_RS16400 (3346742) | 3346742..3347500 | + | 759 | WP_000450121.1 | DNA-binding transcriptional repressor DeoR | - |
| LQ127_RS16405 (3347547) | 3347547..3348749 | - | 1203 | WP_000195961.1 | serine-type D-Ala-D-Ala carboxypeptidase | - |
| LQ127_RS16410 (3348996) | 3348996..3349622 | + | 627 | WP_001295292.1 | glutathione S-transferase GstB | - |
| LQ127_RS16415 (3349619) | 3349619..3350734 | - | 1116 | WP_000554964.1 | aldose sugar dehydrogenase YliI | - |
| LQ127_RS16420 (3350845) | 3350845..3351228 | - | 384 | WP_000497137.1 | biofilm formation regulator BssR | - |
| LQ127_RS16425 (3351441) | 3351441..3352766 | + | 1326 | WP_000049367.1 | 30S ribosomal protein S12 methylthiotransferase RimO | - |
| LQ127_RS16430 (3352992) | 3352992..3353378 | + | 387 | WP_000539521.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LQ127_RS16435 (3353368) | 3353368..3353697 | + | 330 | WP_001280945.1 | DNA-binding transcriptional regulator | Antitoxin Detail |
| LQ127_RS16440 (3353767) | 3353767..3354180 | - | 414 | Protein_3242 | GGDEF domain-containing protein | - |
| LQ127_RS16445 (3354235) | 3354235..3354932 | + | 698 | WP_223216367.1 | IS1 family transposase | - |
| LQ127_RS16450 (3354939) | 3354939..3355871 | - | 933 | Protein_3244 | GGDEF domain-containing protein | - |
| LQ127_RS16455 (3355879) | 3355879..3358227 | - | 2349 | WP_022645413.1 | putative cyclic di-GMP phosphodiesterase PdeI | VF |
| LQ127_RS16460 (3358404) | 3358404..3359315 | - | 912 | WP_001236044.1 | glutathione ABC transporter permease GsiD | - |
| LQ127_RS16465 (3359318) | 3359318..3360238 | - | 921 | WP_022645412.1 | glutathione ABC transporter permease GsiC | - |
| LQ127_RS16470 (3360256) | 3360256..3361794 | - | 1539 | WP_000090154.1 | glutathione ABC transporter substrate-binding protein GsiB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|