MGE detailed information
MGE type: Prophage MGE length: 91735 bp
Accession: NZ_OW967263 Location: 2068187..2159921 Organism: Citrobacter freundii isolate 22 Replicon: chromosome
Accession: NZ_OW967263 Location: 2068187..2159921 Organism: Citrobacter freundii isolate 22 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ176_RS09890 () | 2063483..2064451 | - | 969 | WP_003839177.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| LQ176_RS09895 () | 2064448..2065191 | - | 744 | WP_003034686.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| LQ176_RS09900 () | 2065232..2065627 | - | 396 | WP_003034689.1 | MAPEG family protein | - |
| LQ176_RS09905 () | 2065680..2066021 | - | 342 | Protein_1941 | hypothetical protein | - |
| LQ176_RS09910 () | 2066121..2066948 | + | 828 | WP_230133406.1 | hypothetical protein | - |
| LQ176_RS09915 () | 2068187..2068849 | + | 663 | WP_071667276.1 | DNA N-6-adenine-methyltransferase | - |
| LQ176_RS09920 () | 2069184..2070119 | + | 936 | WP_071667277.1 | helix-turn-helix domain-containing protein | - |
| LQ176_RS09925 () | 2070172..2070357 | - | 186 | WP_071667278.1 | hypothetical protein | - |
| LQ176_RS09930 () | 2070493..2070783 | + | 291 | WP_071667279.1 | hypothetical protein | - |
| LQ176_RS09935 () | 2070783..2071169 | + | 387 | WP_071667280.1 | hypothetical protein | - |
| LQ176_RS09940 () | 2071308..2071628 | + | 321 | WP_071667281.1 | hypothetical protein | - |
| LQ176_RS09945 () | 2072148..2072879 | + | 732 | WP_230133454.1 | transposase | - |
| LQ176_RS09950 () | 2072888..2073067 | + | 180 | WP_128298809.1 | hypothetical protein | - |
| LQ176_RS09955 () | 2073239..2075188 | + | 1950 | WP_230133407.1 | tape measure protein | - |
| LQ176_RS09960 () | 2075233..2076461 | + | 1229 | WP_110129298.1 | IS3 family transposase ISEc27 | Transposase |
| LQ176_RS09965 () | 2076832..2077599 | + | 768 | WP_230133408.1 | hypothetical protein | - |
| LQ176_RS09970 () | 2077596..2079119 | - | 1524 | WP_230133409.1 | hypothetical protein ; Integrase | Integrase |
| LQ176_RS09975 () | 2079195..2079632 | - | 438 | Protein_1955 | DUF72 domain-containing protein | - |
| LQ176_RS09980 () | 2079611..2080924 | - | 1314 | WP_044701477.1 | Putative defective protein IntQ ; Integrase | Integrase |
| LQ176_RS09985 () | 2080983..2081219 | - | 237 | WP_003034696.1 | excisionase family protein | - |
| LQ176_RS09990 () | 2081265..2081414 | - | 150 | WP_165366945.1 | hypothetical protein | - |
| LQ176_RS09995 () | 2081756..2082202 | - | 447 | Protein_1959 | DUF550 domain-containing protein | - |
| LQ176_RS10000 () | 2082199..2082492 | - | 294 | WP_044701466.1 | hypothetical protein | - |
| LQ176_RS10005 () | 2082496..2082891 | - | 396 | WP_044701465.1 | hypothetical protein | - |
| LQ176_RS10010 () | 2082888..2083202 | - | 315 | WP_044701462.1 | hypothetical protein | - |
| LQ176_RS10015 () | 2083199..2083762 | - | 564 | WP_046155139.1 | hypothetical protein | - |
| LQ176_RS10020 () | 2083746..2084786 | - | 1041 | WP_046155140.1 | chromosome partitioning protein ParB | - |
| LQ176_RS10025 () | 2084786..2085145 | - | 360 | WP_176602742.1 | hypothetical protein | - |
| LQ176_RS10035 () | 2085744..2086199 | + | 456 | WP_044702982.1 | hypothetical protein | - |
| LQ176_RS10040 () | 2086655..2087374 | - | 720 | WP_032140310.1 | XRE family transcriptional regulator | - |
| LQ176_RS10045 () | 2087444..2087701 | + | 258 | WP_024195799.1 | YdaS family helix-turn-helix protein | - |
| LQ176_RS10050 () | 2087733..2088296 | + | 564 | WP_016240141.1 | YmfL family putative regulatory protein | - |
| LQ176_RS10055 () | 2088472..2088651 | + | 180 | Protein_1970 | DUF4222 domain-containing protein | - |
| LQ176_RS10060 () | 2088641..2089516 | + | 876 | WP_044702980.1 | conserved phage C-terminal domain-containing protein | - |
| LQ176_RS10065 () | 2089519..2090340 | + | 822 | WP_044702979.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| LQ176_RS10070 () | 2090337..2090555 | + | 219 | WP_044702978.1 | hypothetical protein | - |
| LQ176_RS10075 () | 2090552..2090872 | + | 321 | WP_044702977.1 | LexA family transcriptional regulator | - |
| LQ176_RS10080 () | 2090869..2091255 | + | 387 | WP_044702975.1 | RusA family crossover junction endodeoxyribonuclease | - |
| LQ176_RS10085 () | 2091268..2091993 | + | 726 | WP_044702973.1 | DNA-binding protein | - |
| LQ176_RS10090 () | 2091990..2092979 | + | 990 | WP_046155141.1 | DUF968 domain-containing protein | - |
| LQ176_RS10095 () | 2092994..2093572 | + | 579 | WP_044703009.1 | DUF1133 family protein | - |
| LQ176_RS10100 () | 2094169..2094747 | + | 579 | WP_044703006.1 | hypothetical protein | - |
| LQ176_RS10105 () | 2094847..2095242 | + | 396 | WP_008323296.1 | phage holin family protein | - |
| LQ176_RS10110 () | 2095229..2095510 | + | 282 | WP_046155109.1 | phage holin family protein | - |
| LQ176_RS10115 () | 2095510..2096127 | + | 618 | WP_044703002.1 | glycoside hydrolase family 19 protein | - |
| LQ176_RS10120 () | 2096135..2096404 | + | 270 | WP_047715857.1 | hypothetical protein | - |
| LQ176_RS10125 () | 2096361..2096558 | + | 198 | WP_044702998.1 | hypothetical protein | - |
| LQ176_RS10130 () | 2096592..2096885 | + | 294 | WP_080941989.1 | hypothetical protein | - |
| LQ176_RS10135 () | 2096955..2097191 | + | 237 | WP_044702996.1 | hypothetical protein | - |
| LQ176_RS10140 () | 2097383..2097907 | + | 525 | WP_044702995.1 | Rha family transcriptional regulator | - |
| LQ176_RS10145 () | 2097986..2098495 | + | 510 | WP_044703079.1 | hypothetical protein | - |
| LQ176_RS10150 () | 2098974..2099177 | + | 204 | WP_044703081.1 | hypothetical protein | - |
| LQ176_RS10155 () | 2099341..2099718 | + | 378 | WP_042922212.1 | IS66 family transposase ISCfr14 | Transposase |
| LQ176_RS10160 () | 2099718..2100065 | + | 348 | WP_042922210.1 | IS66 family transposase ISEc8 | Transposase |
| LQ176_RS10165 () | 2100115..2101653 | + | 1539 | WP_042922208.1 | IS66 family transposase ISSgsp1 | Transposase |
| LQ176_RS10170 () | 2101878..2102366 | + | 489 | WP_044700360.1 | DUF1441 family protein | - |
| LQ176_RS10175 () | 2102366..2104468 | + | 2103 | WP_044700358.1 | phage terminase large subunit family protein | - |
| LQ176_RS10180 () | 2104465..2104680 | + | 216 | WP_001082414.1 | hypothetical protein | - |
| LQ176_RS10185 () | 2104677..2106185 | + | 1509 | WP_044700357.1 | phage portal protein | - |
| LQ176_RS10190 () | 2106199..2108154 | + | 1956 | WP_052739235.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| LQ176_RS10195 () | 2108246..2108572 | + | 327 | WP_044700364.1 | DUF2190 family protein | - |
| LQ176_RS10200 () | 2108565..2108840 | + | 276 | WP_044700354.1 | ATP-binding protein | - |
| LQ176_RS10205 () | 2108851..2109429 | + | 579 | WP_044700352.1 | phage tail protein | - |
| LQ176_RS10210 () | 2109426..2109827 | + | 402 | WP_044700350.1 | phage minor tail U family protein | - |
| LQ176_RS10215 () | 2109837..2110580 | + | 744 | WP_044700348.1 | phage tail protein | - |
| LQ176_RS10220 () | 2110591..2111022 | + | 432 | WP_044700346.1 | phage minor tail protein G | - |
| LQ176_RS10225 () | 2111073..2111345 | + | 273 | WP_044700345.1 | phage tail assembly protein T | - |
| LQ176_RS10230 () | 2111329..2114472 | + | 3144 | WP_044700344.1 | phage tail tape measure protein | - |
| LQ176_RS10235 () | 2114476..2114823 | + | 348 | WP_044700341.1 | phage tail protein | - |
| LQ176_RS10240 () | 2114820..2115575 | + | 756 | WP_044700338.1 | phage minor tail protein L | - |
| LQ176_RS10245 () | 2115577..2116287 | + | 711 | WP_044700337.1 | C40 family peptidase | - |
| LQ176_RS10250 () | 2116317..2116652 | + | 336 | WP_052739220.1 | hypothetical protein | - |
| LQ176_RS10255 () | 2116709..2117311 | + | 603 | WP_044700334.1 | tail assembly protein | - |
| LQ176_RS10260 () | 2117341..2120526 | + | 3186 | WP_044700333.1 | host specificity protein J | - |
| LQ176_RS10265 () | 2120526..2120840 | + | 315 | WP_044700331.1 | hypothetical protein | - |
| LQ176_RS10270 () | 2120841..2121515 | + | 675 | WP_046155111.1 | hypothetical protein | - |
| LQ176_RS10275 () | 2121625..2121864 | + | 240 | WP_071681336.1 | cor protein | - |
| LQ176_RS10280 () | 2121923..2122342 | + | 420 | Protein_2015 | phage tail protein | - |
| LQ176_RS10285 () | 2122636..2122995 | + | 360 | WP_230133410.1 | tail fiber domain-containing protein | - |
| LQ176_RS10290 () | 2123063..2123305 | - | 243 | WP_038642073.1 | DinI family protein | - |
| LQ176_RS10295 () | 2123327..2123773 | + | 447 | WP_224769985.1 | S24 family peptidase | - |
| LQ176_RS10300 () | 2123774..2124441 | - | 668 | Protein_2019 | SOS response-associated peptidase | - |
| LQ176_RS10305 () | 2124672..2124767 | - | 96 | Protein_2020 | hypothetical protein | - |
| LQ176_RS10310 () | 2124764..2125330 | - | 567 | WP_044700301.1 | hydrolase | - |
| LQ176_RS10315 () | 2125619..2127391 | + | 1773 | WP_003034862.1 | aspartate--tRNA ligase | - |
| LQ176_RS10320 () | 2127393..2127836 | + | 444 | WP_003034863.1 | dihydroneopterin triphosphate diphosphatase | - |
| LQ176_RS10325 () | 2127865..2128608 | + | 744 | WP_003034865.1 | putative transcriptional regulatory protein YebC | VF |
| LQ176_RS10330 () | 2128643..2129164 | + | 522 | WP_003034867.1 | crossover junction endodeoxyribonuclease RuvC | - |
| LQ176_RS10335 () | 2129245..2129856 | + | 612 | WP_003034869.1 | Holliday junction branch migration protein RuvA | - |
| LQ176_RS10340 () | 2129865..2130875 | + | 1011 | WP_003034872.1 | Holliday junction branch migration DNA helicase RuvB | - |
| LQ176_RS10345 () | 2130954..2131739 | - | 786 | WP_003034874.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| LQ176_RS10350 () | 2131736..2132491 | - | 756 | WP_003034877.1 | Zinc import ATP-binding protein ZnuC | VF |
| LQ176_RS10355 () | 2132570..2133514 | + | 945 | WP_003841677.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| LQ176_RS10360 () | 2133530..2134849 | + | 1320 | WP_003034883.1 | murein DD-endopeptidase MepM | - |
| LQ176_RS10365 () | 2134969..2135940 | + | 972 | WP_032935377.1 | Lipid A biosynthesis myristoyltransferase | VF |
| LQ176_RS10370 () | 2135985..2137427 | - | 1443 | WP_003034890.1 | pyruvate kinase | - |
| LQ176_RS10375 () | 2137546..2138415 | - | 870 | WP_003034893.1 | MurR/RpiR family transcriptional regulator | - |
| LQ176_RS10380 () | 2138783..2140258 | + | 1476 | WP_003034896.1 | glucose-6-phosphate dehydrogenase | - |
| LQ176_RS10385 () | 2140492..2142303 | + | 1812 | WP_003841668.1 | phosphogluconate dehydratase | - |
| LQ176_RS10390 () | 2142338..2142979 | + | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LQ176_RS10395 () | 2143047..2144225 | - | 1179 | WP_044700298.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LQ176_RS10400 () | 2144357..2144647 | + | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| LQ176_RS10405 () | 2144769..2145122 | + | 354 | WP_003034909.1 | protein YebF | - |
| LQ176_RS10410 () | 2145217..2145876 | + | 660 | WP_016150461.1 | tellurite resistance TerB family protein | - |
| LQ176_RS10415 () | 2145963..2148017 | + | 2055 | WP_170864029.1 | oligopeptidase B | - |
| LQ176_RS10420 () | 2148008..2148670 | - | 663 | WP_003034918.1 | exodeoxyribonuclease X | - |
| LQ176_RS10425 () | 2148694..2149350 | - | 657 | WP_003841657.1 | carbon-nitrogen hydrolase family protein | - |
| LQ176_RS10430 () | 2149457..2149687 | - | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| LQ176_RS10435 () | 2149831..2150205 | + | 375 | WP_003034928.1 | CopC domain-containing protein YobA | - |
| LQ176_RS10440 () | 2150209..2151081 | + | 873 | WP_003034931.1 | copper homeostasis membrane protein CopD | - |
| LQ176_RS10445 () | 2151102..2151440 | + | 339 | WP_044700293.1 | YebY family protein | - |
| - | 2151561..2151704 | - | 144 | - | - | Antitoxin Detail |
| - | 2151596..2151699 | + | 104 | - | - | Toxin Detail |
| LQ176_RS10450 () | 2151853..2152494 | + | 642 | WP_003034937.1 | protein-serine/threonine phosphatase | - |
| LQ176_RS10455 () | 2152495..2152686 | - | 192 | WP_003034941.1 | YebW family protein | - |
| LQ176_RS10460 () | 2152789..2153025 | - | 237 | WP_029139506.1 | YebV family protein | - |
| LQ176_RS10465 () | 2153126..2154514 | - | 1389 | WP_044700319.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LQ176_RS10470 () | 2154627..2157260 | - | 2634 | WP_003034947.1 | Intermembrane transport protein YebT | VF |
| LQ176_RS10475 () | 2157229..2158512 | - | 1284 | WP_003841983.1 | membrane integrity lipid transport subunit YebS | - |
| LQ176_RS10480 () | 2158641..2159138 | + | 498 | WP_003034953.1 | GAF domain-containing protein | - |
| LQ176_RS10485 () | 2159235..2159921 | + | 687 | WP_003034957.1 | RNA chaperone ProQ | - |
| LQ176_RS10490 () | 2159941..2161989 | + | 2049 | WP_003034960.1 | carboxy terminal-processing peptidase | - |
| LQ176_RS10495 () | 2162182..2163063 | + | 882 | WP_003034964.1 | protease HtpX | - |
| LQ176_RS10500 () | 2163162..2164199 | - | 1038 | WP_127702267.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|