MGE detailed information
MGE type: Conjugative plasmid MGE length: 145385 bp
Accession: NZ_OW967004 Location: 1..145385 Organism: Escherichia coli isolate 624 Replicon: plasmid P1
Accession: NZ_OW967004 Location: 1..145385 Organism: Escherichia coli isolate 624 Replicon: plasmid P1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ179_RS25025 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| LQ179_RS25030 (1263) | 1263..2003 | - | 741 | WP_001514245.1 | tyrosine-type recombinase/integrase | - |
| LQ179_RS25035 (2124) | 2124..2312 | - | 189 | WP_001332052.1 | hypothetical protein | - |
| LQ179_RS25040 (2686) | 2686..3588 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| LQ179_RS25045 (3657) | 3657..4766 | - | 1110 | WP_139496109.1 | SDR family oxidoreductase | - |
| LQ179_RS25050 (5198) | 5198..6151 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| LQ179_RS25055 (7404) | 7404..7944 | - | 541 | Protein_6 | IS3 family transposase IS1351 | Transposase |
| LQ179_RS25060 (9555) | 9555..10742 | + | 1188 | WP_001696612.1 | efflux RND transporter periplasmic adaptor subunit | - |
| LQ179_RS25065 (10739) | 10739..12679 | + | 1941 | WP_001610286.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| LQ179_RS25070 (12683) | 12683..14053 | + | 1371 | WP_001696614.1 | efflux transporter outer membrane subunit | - |
| LQ179_RS25075 (14384) | 14384..15697 | + | 1314 | Protein_10 | IS4 family transposase | - |
| LQ179_RS25080 (15836) | 15836..16816 | + | 981 | WP_096934411.1 | IS5 family transposase ISKpn26 | Transposase |
| LQ179_RS25085 (17004) | 17004..17759 | - | 756 | WP_032164002.1 | SprT family zinc-dependent metalloprotease | - |
| LQ179_RS25090 (17756) | 17756..21040 | - | 3285 | WP_139496090.1 | type I restriction endonuclease subunit R | - |
| LQ179_RS25095 (21061) | 21061..22365 | - | 1305 | WP_032164004.1 | restriction endonuclease subunit S | - |
| LQ179_RS25100 (22355) | 22355..23878 | - | 1524 | WP_139496089.1 | type I restriction-modification system subunit M | - |
| LQ179_RS25105 (24507) | 24507..24656 | - | 150 | Protein_16 | IS3 family transposase IS2 | Transposase |
| LQ179_RS25110 (24834) | 24834..26027 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| LQ179_RS25115 (26143) | 26143..27371 | + | 1229 | WP_085959875.1 | IS3 family transposase IS2 | Transposase |
| LQ179_RS25125 (30458) | 30458..30751 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| LQ179_RS25130 (30809) | 30809..31008 | - | 200 | Protein_21 | lysis protein | - |
| LQ179_RS25135 (31562) | 31562..32586 | + | 1025 | Protein_22 | integrase core domain-containing protein | - |
| LQ179_RS25140 (33897) | 33897..35012 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| LQ179_RS25145 (35152) | 35152..38811 | + | 3660 | WP_001442133.1 | Multidrug efflux ATP-binding/permease protein | VF |
| LQ179_RS25150 (38915) | 38915..40144 | + | 1230 | WP_000933672.1 | Enterochelin esterase | VF |
| LQ179_RS25155 (40229) | 40229..41185 | + | 957 | WP_001610312.1 | Ferri-bacillibactin esterase BesA | VF |
| LQ179_RS25160 (41230) | 41230..43407 | - | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| LQ179_RS25165 (44262) | 44262..45296 | - | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| LQ179_RS25170 (45477) | 45477..45778 | + | 302 | Protein_29 | hypothetical protein | - |
| LQ179_RS25175 (45856) | 45856..46164 | - | 309 | WP_000377483.1 | DUF6404 family protein | - |
| LQ179_RS25180 (46317) | 46317..46442 | - | 126 | Protein_31 | type II toxin-antitoxin system toxin YacB | - |
| LQ179_RS25185 (46442) | 46442..46710 | - | 269 | Protein_32 | type II toxin-antitoxin system antitoxin YacA | - |
| LQ179_RS25190 (47321) | 47321..48595 | + | 1275 | WP_000489608.1 | HlyD family secretion protein | - |
| LQ179_RS25195 (48588) | 48588..50684 | + | 2097 | WP_000184924.1 | microcin H47 export transporter peptidase/ATP-binding subunit MchF | - |
| LQ179_RS25200 (50854) | 50854..51165 | - | 312 | WP_001259758.1 | colicin V | - |
| LQ179_RS25205 (51143) | 51143..51379 | - | 237 | WP_001323890.1 | colicin V immunity protein | - |
| LQ179_RS25210 (51498) | 51498..51941 | + | 444 | WP_001323891.1 | dehydrogenase | - |
| LQ179_RS25215 (51913) | 51913..52317 | + | 405 | WP_001389361.1 | hypothetical protein | - |
| LQ179_RS25220 (52319) | 52319..52588 | + | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| LQ179_RS25225 (52585) | 52585..52851 | + | 267 | WP_001017350.1 | FAD-dependent oxidoreductase | - |
| LQ179_RS25230 (52907) | 52907..53359 | - | 453 | WP_000670963.1 | acyltransferase | - |
| LQ179_RS25235 (53652) | 53652..53912 | + | 261 | WP_000343091.1 | hypothetical protein | - |
| LQ179_RS25240 (53909) | 53909..54499 | + | 591 | WP_001350923.1 | hypothetical protein | - |
| LQ179_RS27355 (54519) | 54519..54644 | - | 126 | WP_257792357.1 | hypothetical protein | - |
| LQ179_RS25245 (54837) | 54837..56414 | - | 1578 | Protein_45 | Methyl-accepting chemotaxis protein McpQ | VF |
| LQ179_RS25250 (56724) | 56724..57284 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| LQ179_RS25255 (57288) | 57288..59543 | + | 2256 | Protein_47 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LQ179_RS25260 (59690) | 59690..60550 | - | 861 | WP_021561477.1 | Beta-lactamase TEM | ARG |
| LQ179_RS25265 (60733) | 60733..61290 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| LQ179_RS25270 (61454) | 61454..64459 | + | 3006 | WP_001143759.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| LQ179_RS25275 (64493) | 64493..65209 | + | 717 | Protein_51 | Tn3 family transposase | - |
| LQ179_RS25280 (65242) | 65242..65376 | - | 135 | Protein_52 | DUF6404 family protein | - |
| LQ179_RS25285 (65505) | 65505..65840 | + | 336 | WP_001080729.1 | colicin 1A immunity protein | - |
| LQ179_RS25290 (65862) | 65862..67742 | - | 1881 | WP_001283335.1 | colicin Ia central receptor-binding domain-containing protein | - |
| LQ179_RS25295 (67928) | 67928..68776 | - | 849 | WP_001057989.1 | 3'-5' exonuclease | - |
| LQ179_RS25300 (68822) | 68822..69100 | - | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| LQ179_RS25305 (69100) | 69100..69369 | - | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| LQ179_RS25310 (70285) | 70285..71142 | - | 858 | WP_001514234.1 | incFII family plasmid replication initiator RepA | - |
| LQ179_RS25315 (71135) | 71135..71209 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| LQ179_RS25320 (71434) | 71434..71694 | - | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| LQ179_RS25325 (71934) | 71934..72524 | - | 591 | WP_000766816.1 | DUF2726 domain-containing protein | - |
| LQ179_RS25330 (72563) | 72563..72772 | - | 210 | WP_001514235.1 | hemolysin expression modulator Hha | - |
| LQ179_RS25335 (72818) | 72818..73279 | - | 462 | WP_001514236.1 | thermonuclease family protein | - |
| LQ179_RS25340 (73524) | 73524..73736 | - | 213 | WP_001371875.1 | ANR family transcriptional regulator | - |
| LQ179_RS25345 (73869) | 73869..74429 | - | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| LQ179_RS25350 (74532) | 74532..75392 | - | 861 | WP_000704522.1 | putative protein YcjY | VF |
| LQ179_RS25355 (75451) | 75451..76197 | - | 747 | WP_000205766.1 | conjugal transfer pilus acetylase TraX | - |
| LQ179_RS25360 (76217) | 76217..77842 | - | 1626 | Protein_68 | Multifunctional conjugation protein TraI | Relaxase |
| LQ179_RS25365 (77879) | 77879..79092 | + | 1214 | WP_085949836.1 | IS3 family transposase | - |
| LQ179_RS25370 (79101) | 79101..82748 | - | 3648 | Protein_70 | Multifunctional conjugation protein TraI | Relaxase |
| LQ179_RS25375 (82748) | 82748..84901 | - | 2154 | WP_001514238.1 | type IV conjugative transfer system coupling protein TraD | - |
| LQ179_RS25380 (85154) | 85154..85885 | - | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| LQ179_RS25385 (85899) | 85899..86408 | - | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| LQ179_RS25390 (86405) | 86405..89230 | - | 2826 | WP_001007045.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| LQ179_RS25395 (89227) | 89227..90600 | - | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| LQ179_RS25400 (90600) | 90600..90962 | - | 363 | WP_010379880.1 | P-type conjugative transfer protein TrbJ | - |
| LQ179_RS25405 (90892) | 90892..91437 | - | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| LQ179_RS25410 (91424) | 91424..91708 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LQ179_RS25415 (91827) | 91827..92174 | - | 348 | WP_001287677.1 | conjugal transfer protein TrbA | - |
| LQ179_RS25420 (92190) | 92190..92933 | - | 744 | WP_001514239.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| LQ179_RS25425 (92926) | 92926..93183 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| LQ179_RS25430 (93210) | 93210..95018 | - | 1809 | WP_000821846.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| LQ179_RS25435 (95015) | 95015..95653 | - | 639 | WP_000777693.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| LQ179_RS25440 (95662) | 95662..96654 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| LQ179_RS25445 (96651) | 96651..97283 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| LQ179_RS25450 (97280) | 97280..97666 | - | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| LQ179_RS25455 (97663) | 97663..100290 | - | 2628 | WP_001064252.1 | type IV secretion system protein TraC | - |
| LQ179_RS25460 (100450) | 100450..100671 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| LQ179_RS25465 (100806) | 100806..101321 | - | 516 | WP_000809841.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LQ179_RS25470 (101318) | 101318..101569 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| LQ179_RS25475 (101581) | 101581..101778 | - | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| LQ179_RS25480 (101765) | 101765..102355 | - | 591 | WP_000002796.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| LQ179_RS25485 (102345) | 102345..103772 | - | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| LQ179_RS25490 (103772) | 103772..104500 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| LQ179_RS25495 (104487) | 104487..105053 | - | 567 | WP_000399785.1 | type IV conjugative transfer system protein TraE | - |
| LQ179_RS25500 (105075) | 105075..105386 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| LQ179_RS25505 (105401) | 105401..105766 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| LQ179_RS25510 (105799) | 105799..106200 | - | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| LQ179_RS25515 (106293) | 106293..106982 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| LQ179_RS25520 (107169) | 107169..107552 | - | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LQ179_RS25525 (107967) | 107967..108476 | + | 510 | WP_000759163.1 | hypothetical protein | VF |
| LQ179_RS25530 (108772) | 108772..109593 | - | 822 | WP_001234468.1 | DUF932 domain-containing protein | - |
| LQ179_RS25535 (109712) | 109712..109999 | - | 288 | WP_000107520.1 | hypothetical protein | - |
| LQ179_RS25540 (110300) | 110300..110597 | + | 298 | Protein_104 | hypothetical protein | - |
| LQ179_RS25545 (110898) | 110898..111020 | - | 123 | WP_223195199.1 | Hok/Gef family protein | - |
| LQ179_RS25550 (110965) | 110965..111078 | - | 114 | Protein_106 | DUF5431 family protein | - |
| - (111112) | 111112..111323 | + | 212 | NuclAT_0 | - | - |
| - (111112) | 111112..111323 | - | 212 | NuclAT_0 | - | - |
| - (111112) | 111112..111323 | - | 212 | NuclAT_0 | - | - |
| - (111112) | 111112..111323 | - | 212 | NuclAT_0 | - | - |
| - (111112) | 111112..111323 | - | 212 | NuclAT_0 | - | - |
| LQ179_RS25555 (111268) | 111268..112054 | - | 787 | Protein_107 | plasmid SOS inhibition protein A | - |
| LQ179_RS25560 (112051) | 112051..112485 | - | 435 | WP_000845922.1 | conjugation system SOS inhibitor PsiB | - |
| LQ179_RS25565 (112540) | 112540..114498 | - | 1959 | WP_000117202.1 | ParB/RepB/Spo0J family partition protein | - |
| LQ179_RS25570 (114562) | 114562..114795 | - | 234 | WP_000005988.1 | DUF905 family protein | - |
| LQ179_RS25575 (114893) | 114893..115390 | - | 498 | Protein_111 | single-stranded DNA-binding protein | - |
| LQ179_RS25580 (115691) | 115691..116110 | + | 420 | WP_015056142.1 | hypothetical protein | - |
| LQ179_RS25585 (116196) | 116196..116759 | - | 564 | WP_139496270.1 | class I SAM-dependent methyltransferase | - |
| LQ179_RS25590 (116807) | 116807..118168 | - | 1362 | WP_000170680.1 | DUF3560 domain-containing protein | - |
| LQ179_RS25595 (118220) | 118220..118450 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| LQ179_RS25600 (118967) | 118967..119220 | + | 254 | Protein_116 | hypothetical protein | - |
| LQ179_RS25605 (119444) | 119444..119626 | - | 183 | WP_001027505.1 | hypothetical protein | - |
| LQ179_RS25610 (119626) | 119626..120087 | - | 462 | WP_042007484.1 | DUF1380 family protein | - |
| LQ179_RS25615 (120087) | 120087..120512 | - | 426 | WP_001198922.1 | antirestriction protein | - |
| LQ179_RS25620 (120914) | 120914..121885 | + | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
| LQ179_RS25625 (122146) | 122146..122358 | - | 213 | WP_000092896.1 | hypothetical protein | - |
| LQ179_RS25630 (122371) | 122371..122946 | - | 576 | WP_000343071.1 | hypothetical protein | - |
| LQ179_RS25635 (123015) | 123015..123353 | - | 339 | WP_001513511.1 | hypothetical protein | - |
| LQ179_RS25640 (123359) | 123359..123528 | - | 170 | Protein_124 | hypothetical protein | - |
| LQ179_RS25645 (123993) | 123993..124964 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| LQ179_RS25650 (124964) | 124964..126130 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| LQ179_RS25660 (127652) | 127652..129853 | - | 2202 | WP_000973517.1 | Ferric aerobactin receptor | VF |
| LQ179_RS25665 (129879) | 129879..131212 | - | 1334 | Protein_129 | L-lysine N6-monooxygenase | VF |
| LQ179_RS25670 (131209) | 131209..132951 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| LQ179_RS25675 (132951) | 132951..133898 | - | 948 | WP_000011907.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| LQ179_RS25680 (133899) | 133899..135623 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| LQ179_RS25685 (135759) | 135759..136952 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| LQ179_RS25690 (137332) | 137332..137712 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| LQ179_RS25695 (138053) | 138053..138466 | - | 414 | Protein_135 | phosphopyruvate hydratase | - |
| LQ179_RS25700 (138955) | 138955..139812 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| LQ179_RS25705 (139809) | 139809..140666 | - | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| LQ179_RS25710 (140663) | 140663..141490 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| LQ179_RS25715 (141490) | 141490..142404 | - | 915 | WP_001514243.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| LQ179_RS25720 (142760) | 142760..143457 | + | 698 | WP_223155668.1 | IS1 family transposase IS1S | Transposase |
| LQ179_RS25725 (143637) | 143637..144150 | - | 514 | Protein_141 | DUF4113 domain-containing protein | - |
| LQ179_RS25730 (144211) | 144211..144315 | - | 105 | Protein_142 | AAA family ATPase | - |
| LQ179_RS25735 (144317) | 144317..144640 | - | 324 | Protein_143 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|