MGE detailed information
MGE type: Genomic_island MGE length: 45442 bp
Accession: NZ_OW967003 Location: 4148235..4193676 Organism: Escherichia coli isolate 624 Replicon: chromosome
Accession: NZ_OW967003 Location: 4148235..4193676 Organism: Escherichia coli isolate 624 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ179_RS19915 (4143588) | 4143588..4144556 | + | 969 | WP_000633246.1 | type II secretion system minor pseudopilin GspK | - |
| LQ179_RS19920 (4144562) | 4144562..4145740 | + | 1179 | WP_089647522.1 | type II secretion system protein GspL | - |
| LQ179_RS19925 (4145742) | 4145742..4146278 | + | 537 | WP_000942818.1 | GspM family type II secretion system protein YghD | - |
| LQ179_RS19930 (4146839) | 4146839..4146980 | + | 142 | Protein_3901 | ABC transporter permease | - |
| LQ179_RS19935 (4147705) | 4147705..4148076 | + | 372 | WP_071589329.1 | hypothetical protein | - |
| LQ179_RS19940 (4148103) | 4148103..4149848 | + | 1746 | WP_001353920.1 | Polysialic acid transport protein KpsD | VF |
| LQ179_RS19945 (4149915) | 4149915..4150715 | + | 801 | WP_000360426.1 | Polysialic acid transport protein KpsM | VF |
| LQ179_RS19950 (4150727) | 4150727..4151377 | + | 651 | WP_001547016.1 | Polysialic acid transport ATP-binding protein KpsT | VF |
| LQ179_RS19955 (4151391) | 4151391..4152593 | + | 1203 | WP_000203714.1 | hypothetical protein | VF |
| LQ179_RS19960 (4152870) | 4152870..4153883 | + | 1014 | WP_001353921.1 | hypothetical protein | - |
| LQ179_RS19965 (4153900) | 4153900..4156113 | + | 2214 | WP_225389416.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| LQ179_RS19970 (4156180) | 4156180..4157064 | + | 885 | WP_024186275.1 | hypothetical protein | - |
| LQ179_RS19975 (4157100) | 4157100..4158266 | + | 1167 | WP_001027828.1 | UDP-glucose 6-dehydrogenase | VF |
| LQ179_RS19980 (4158353) | 4158353..4159255 | + | 903 | WP_001547011.1 | glycosyltransferase family 2 protein | - |
| LQ179_RS19985 (4159618) | 4159618..4161357 | + | 1740 | WP_230138839.1 | glycosyltransferase family 2 protein | - |
| LQ179_RS19990 (4161345) | 4161345..4162376 | + | 1032 | WP_000343866.1 | hypothetical protein | - |
| LQ179_RS19995 (4163101) | 4163101..4164186 | + | 1086 | WP_000699467.1 | dTDP-glucose 4,6-dehydratase | VF |
| LQ179_RS20000 (4164186) | 4164186..4165073 | + | 888 | WP_000547801.1 | dTDP-4-dehydrorhamnose reductase | - |
| LQ179_RS20005 (4165154) | 4165154..4166032 | + | 879 | WP_001556223.1 | Glucose-1-phosphate thymidylyltransferase | VF |
| LQ179_RS20010 (4166098) | 4166098..4166649 | + | 552 | WP_139496062.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | VF |
| LQ179_RS20015 (4166699) | 4166699..4168846 | + | 2148 | WP_230138840.1 | hypothetical protein | VF |
| LQ179_RS20020 (4170011) | 4170011..4171231 | + | 1221 | WP_000794251.1 | hypothetical protein | VF |
| LQ179_RS20025 (4171257) | 4171257..4171487 | - | 231 | Protein_3920 | hypothetical protein | - |
| LQ179_RS20030 (4171593) | 4171593..4171769 | - | 177 | WP_000839288.1 | DUF957 domain-containing protein | - |
| LQ179_RS20035 (4171786) | 4171786..4172216 | - | 431 | Protein_3922 | DUF5983 family protein | - |
| LQ179_RS20040 (4172213) | 4172213..4172590 | - | 378 | WP_230138841.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| LQ179_RS20045 (4172679) | 4172679..4173032 | - | 354 | WP_230138842.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| LQ179_RS20050 (4173106) | 4173106..4173327 | - | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| LQ179_RS20055 (4173390) | 4173390..4173866 | - | 477 | WP_001186773.1 | RadC family protein | - |
| LQ179_RS20060 (4173882) | 4173882..4174367 | - | 486 | WP_230138843.1 | antirestriction protein | - |
| LQ179_RS20065 (4174459) | 4174459..4175280 | - | 822 | WP_230138844.1 | DUF932 domain-containing protein | - |
| LQ179_RS20070 (4175609) | 4175609..4178455 | - | 2847 | WP_230138845.1 | Ag43/Cah family autotransporter adhesin | - |
| LQ179_RS20075 (4178828) | 4178828..4179700 | - | 873 | WP_001069701.1 | GTPase family protein | - |
| LQ179_RS20080 (4179799) | 4179799..4180671 | - | 873 | WP_021527054.1 | hypothetical protein | - |
| LQ179_RS20085 (4181387) | 4181387..4182597 | - | 1211 | Protein_3932 | IS3 family transposase IS629 | Transposase |
| LQ179_RS20090 (4182886) | 4182886..4183488 | - | 603 | WP_138581536.1 | hypothetical protein | - |
| LQ179_RS20095 (4183583) | 4183583..4183789 | - | 207 | WP_230138846.1 | AlpA family transcriptional regulator | - |
| LQ179_RS20100 (4184514) | 4184514..4184726 | + | 213 | WP_000453333.1 | hemolysin expression modulator Hha | - |
| LQ179_RS20105 (4185065) | 4185065..4185253 | - | 189 | WP_021526982.1 | hypothetical protein | - |
| LQ179_RS20110 (4185456) | 4185456..4186025 | + | 570 | WP_021526981.1 | inovirus Gp2 family protein | - |
| LQ179_RS20115 (4186284) | 4186284..4186685 | + | 402 | WP_089078738.1 | putative zinc ribbon protein | - |
| LQ179_RS20120 (4186673) | 4186673..4187107 | + | 435 | WP_001221626.1 | zinc-ribbon domain-containing protein | - |
| LQ179_RS20125 (4188168) | 4188168..4188394 | + | 227 | Protein_3940 | ACT domain-containing protein | - |
| LQ179_RS20130 (4188396) | 4188396..4189178 | - | 783 | WP_001298267.1 | DeoR family transcriptional regulator | - |
| LQ179_RS20135 (4189482) | 4189482..4190402 | + | 921 | WP_000350265.1 | ribokinase | - |
| LQ179_RS20140 (4190430) | 4190430..4191746 | + | 1317 | WP_139496236.1 | L-fucose:H+ symporter permease | - |
| LQ179_RS20145 (4191758) | 4191758..4192771 | + | 1014 | WP_042028836.1 | aldose 1-epimerase family protein | - |
| LQ179_RS20150 (4192960) | 4192960..4193223 | - | 264 | Protein_3945 | IS3 family transposase ISEc48 | Transposase |
| LQ179_RS20155 (4193311) | 4193311..4193676 | - | 366 | WP_042028838.1 | hypothetical protein | - |
| LQ179_RS20160 (4193719) | 4193719..4194987 | - | 1269 | Protein_3947 | phosphoglycerate transporter PgtP | - |
| LQ179_RS20165 (4195078) | 4195078..4196306 | + | 1229 | WP_085959875.1 | IS3 family transposase | - |
| LQ179_RS20170 (4196312) | 4196312..4196419 | - | 108 | Protein_3949 | hypothetical protein | - |
| LQ179_RS20175 (4196818) | 4196818..4198035 | + | 1218 | WP_139469973.1 | phosphoglycerate transport regulator PgtC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|