MGE detailed information
MGE type: Genomic_island MGE length: 21370 bp
Accession: NZ_OW849099 Location: 2880139..2901508 Organism: Citrobacter freundii isolate 402 Replicon: chromosome
Accession: NZ_OW849099 Location: 2880139..2901508 Organism: Citrobacter freundii isolate 402 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ100_RS13880 (2875598) | 2875598..2876623 | - | 1026 | WP_060855260.1 | beta-N-acetylhexosaminidase | - |
| LQ100_RS13885 (2876634) | 2876634..2877458 | - | 825 | WP_003030819.1 | thiamine kinase | - |
| LQ100_RS13890 (2877439) | 2877439..2878080 | - | 642 | WP_003030820.1 | penicillin-binding protein activator LpoB | - |
| LQ100_RS13895 (2878094) | 2878094..2878468 | - | 375 | WP_003030823.1 | YcfL family protein | - |
| LQ100_RS13900 (2878471) | 2878471..2878830 | - | 360 | WP_003030826.1 | purine nucleoside phosphoramidase | - |
| LQ100_RS13905 (2879102) | 2879102..2879992 | - | 891 | WP_003841843.1 | LysR family transcriptional regulator | - |
| LQ100_RS13910 (2880139) | 2880139..2880738 | + | 600 | WP_044700624.1 | cysteine hydrolase | - |
| LQ100_RS13915 (2880735) | 2880735..2881772 | + | 1038 | WP_003846740.1 | hydrogenase expression/formation protein HypE | - |
| LQ100_RS13920 (2881744) | 2881744..2884110 | + | 2367 | WP_060855259.1 | carbamoyltransferase HypF | - |
| LQ100_RS13925 (2884103) | 2884103..2884822 | + | 720 | WP_060855258.1 | HAD family phosphatase | - |
| LQ100_RS13930 (2884840) | 2884840..2886009 | + | 1170 | WP_213749586.1 | MFS transporter | - |
| LQ100_RS13940 (2886289) | 2886289..2887776 | + | 1488 | WP_003846749.1 | EmmdR/YeeO family multidrug/toxin efflux MATE transporter | - |
| LQ100_RS13950 (2888092) | 2888092..2889042 | - | 951 | WP_016149950.1 | HTH-type transcriptional regulator Cbl | - |
| LQ100_RS13955 (2889144) | 2889144..2890061 | - | 918 | WP_054528287.1 | nitrogen assimilation transcriptional regulator NAC | - |
| LQ100_RS13965 (2890536) | 2890536..2890868 | - | 333 | WP_003836692.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| LQ100_RS13970 (2890869) | 2890869..2891126 | - | 258 | WP_003836694.1 | hypothetical protein | Antitoxin Detail |
| LQ100_RS13975 (2891740) | 2891740..2895639 | + | 3900 | WP_060855256.1 | hypothetical protein | - |
| LQ100_RS13980 (2895644) | 2895644..2898112 | + | 2469 | WP_230141923.1 | hypothetical protein | - |
| LQ100_RS13985 (2898133) | 2898133..2899268 | + | 1136 | Protein_2744 | IS3 family transposase | - |
| LQ100_RS13990 (2899588) | 2899588..2900544 | + | 957 | WP_225990739.1 | matrixin family metalloprotease | - |
| LQ100_RS13995 (2900550) | 2900550..2901161 | + | 612 | WP_153070797.1 | hypothetical protein | - |
| LQ100_RS14000 (2901648) | 2901648..2902169 | + | 522 | WP_003846770.1 | ferric citrate uptake sigma factor FecI | - |
| LQ100_RS14005 (2902166) | 2902166..2903119 | + | 954 | WP_060855254.1 | ferric citrate uptake sigma factor regulator FecR | - |
| LQ100_RS14010 (2903206) | 2903206..2905530 | + | 2325 | WP_230141928.1 | TonB-dependent Fe(3+) dicitrate receptor FecA | - |
| LQ100_RS14015 (2905589) | 2905589..2906491 | + | 903 | WP_016149945.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|