MGE detailed information
MGE type: Prophage MGE length: 53690 bp
Accession: NZ_OW849099 Location: 2026792..2080481 Organism: Citrobacter freundii isolate 402 Replicon: chromosome
Accession: NZ_OW849099 Location: 2026792..2080481 Organism: Citrobacter freundii isolate 402 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ100_RS09695 () | 2023191..2023832 | + | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LQ100_RS09700 () | 2023900..2025078 | - | 1179 | WP_060855107.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LQ100_RS09705 () | 2025210..2025500 | + | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| LQ100_RS09710 () | 2025622..2025975 | + | 354 | WP_003034909.1 | protein YebF | - |
| LQ100_RS09715 () | 2026070..2026729 | + | 660 | WP_061548578.1 | tellurite resistance TerB family protein | - |
| LQ100_RS09720 () | 2026816..2028870 | + | 2055 | WP_196491837.1 | oligopeptidase B | - |
| LQ100_RS09725 () | 2028861..2029523 | - | 663 | WP_003833802.1 | exodeoxyribonuclease X | - |
| LQ100_RS09730 () | 2029547..2030203 | - | 657 | WP_060855110.1 | carbon-nitrogen hydrolase family protein | - |
| LQ100_RS09735 () | 2030310..2030540 | - | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| LQ100_RS09740 () | 2030684..2031058 | + | 375 | WP_003034928.1 | CopC domain-containing protein YobA | - |
| LQ100_RS09745 () | 2031062..2031934 | + | 873 | WP_060855111.1 | copper homeostasis membrane protein CopD | - |
| LQ100_RS09750 () | 2031955..2032293 | + | 339 | WP_060855112.1 | YebY family protein | - |
| - | 2032414..2032555 | - | 142 | - | - | Antitoxin Detail |
| - | 2032449..2032552 | + | 104 | - | - | Toxin Detail |
| LQ100_RS09755 () | 2032685..2033764 | - | 1080 | WP_016150458.1 | hypothetical protein ; Integrase | Integrase |
| LQ100_RS09760 () | 2033742..2034002 | - | 261 | WP_230142764.1 | excisionase | - |
| LQ100_RS09765 () | 2034066..2036537 | - | 2472 | WP_060855113.1 | exonuclease | - |
| LQ100_RS09770 () | 2036679..2037017 | - | 339 | WP_230141588.1 | Rrf2 family transcriptional regulator | - |
| LQ100_RS09775 () | 2037067..2037279 | - | 213 | WP_153070801.1 | hypothetical protein | - |
| LQ100_RS09780 () | 2037498..2037878 | - | 381 | WP_003832307.1 | helix-turn-helix domain-containing protein | - |
| LQ100_RS09785 () | 2037984..2038196 | + | 213 | WP_003832309.1 | helix-turn-helix transcriptional regulator | - |
| LQ100_RS09790 () | 2038200..2038754 | + | 555 | WP_060855150.1 | toxin YdaT family protein | - |
| LQ100_RS09795 () | 2039007..2039918 | + | 912 | WP_230141590.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| LQ100_RS09800 () | 2039830..2040375 | + | 546 | WP_123260993.1 | replication protein P | - |
| LQ100_RS09805 () | 2040391..2040807 | + | 417 | WP_016150448.1 | PerC family transcriptional regulator | - |
| LQ100_RS09810 () | 2040813..2041151 | + | 339 | WP_060855152.1 | DUF977 family protein | - |
| LQ100_RS09815 () | 2041148..2041342 | + | 195 | WP_230141594.1 | hypothetical protein | - |
| LQ100_RS09820 () | 2041551..2042108 | + | 558 | WP_223307939.1 | DUF550 domain-containing protein | - |
| LQ100_RS09825 () | 2042160..2042279 | + | 120 | Protein_1921 | 3'-5' exoribonuclease | - |
| LQ100_RS09830 () | 2042523..2042903 | - | 381 | WP_053271636.1 | hypothetical protein | - |
| LQ100_RS09835 () | 2043604..2044167 | - | 564 | WP_170973743.1 | hypothetical protein | - |
| LQ100_RS09840 () | 2044658..2044891 | + | 234 | WP_060855117.1 | DinI family protein | - |
| LQ100_RS09845 () | 2044937..2045182 | + | 246 | WP_060855118.1 | hypothetical protein | - |
| LQ100_RS09850 () | 2045312..2045512 | + | 201 | WP_060855119.1 | hypothetical protein | - |
| LQ100_RS09855 () | 2045515..2045874 | + | 360 | WP_060855120.1 | RusA family crossover junction endodeoxyribonuclease | - |
| LQ100_RS09860 () | 2045871..2046911 | + | 1041 | WP_060855121.1 | DUF968 domain-containing protein | - |
| LQ100_RS09865 () | 2046929..2047759 | + | 831 | WP_230141599.1 | antitermination protein | - |
| LQ100_RS09870 () | 2047948..2048733 | + | 786 | WP_181826150.1 | hypothetical protein | - |
| LQ100_RS09875 () | 2048999..2049187 | + | 189 | WP_079895698.1 | hypothetical protein | - |
| LQ100_RS09880 () | 2049277..2049663 | + | 387 | WP_001283171.1 | phage holin family protein | - |
| LQ100_RS09885 () | 2049650..2049931 | + | 282 | WP_072271948.1 | phage holin family protein | - |
| LQ100_RS09890 () | 2050087..2050701 | + | 615 | WP_181826151.1 | glycoside hydrolase family 19 protein | - |
| LQ100_RS09895 () | 2050709..2050978 | + | 270 | WP_060855128.1 | hypothetical protein | - |
| LQ100_RS09900 () | 2050935..2051135 | + | 201 | WP_072271949.1 | hypothetical protein | - |
| LQ100_RS09905 () | 2051266..2051661 | + | 396 | WP_060855129.1 | hypothetical protein | - |
| LQ100_RS09910 () | 2051828..2052043 | + | 216 | WP_060855130.1 | hypothetical protein | - |
| LQ100_RS09915 () | 2052031..2052381 | + | 351 | WP_072271950.1 | HNH endonuclease signature motif containing protein | - |
| LQ100_RS09920 () | 2052538..2053035 | + | 498 | WP_003841734.1 | phage terminase small subunit P27 family | - |
| LQ100_RS09925 () | 2053035..2054792 | + | 1758 | WP_181826152.1 | terminase large subunit | - |
| LQ100_RS09930 () | 2054940..2056166 | + | 1227 | WP_060855133.1 | phage portal protein | - |
| LQ100_RS09935 () | 2056159..2056758 | + | 600 | WP_060855134.1 | HK97 family phage prohead protease | - |
| LQ100_RS09940 () | 2056768..2058006 | + | 1239 | WP_060855135.1 | phage major capsid protein | - |
| LQ100_RS09945 () | 2058084..2058401 | + | 318 | WP_060855136.1 | head-tail connector protein | - |
| LQ100_RS09950 () | 2058471..2058683 | + | 213 | WP_129622559.1 | hypothetical protein | - |
| LQ100_RS09955 () | 2058685..2059017 | + | 333 | WP_060855138.1 | phage head closure protein | - |
| LQ100_RS09960 () | 2059010..2059549 | + | 540 | WP_181826153.1 | HK97 gp10 family phage protein | - |
| LQ100_RS09965 () | 2059546..2059911 | + | 366 | WP_060855140.1 | DUF3168 domain-containing protein | - |
| LQ100_RS09970 () | 2059970..2060461 | + | 492 | WP_046671182.1 | phage tail tube protein | - |
| LQ100_RS09975 () | 2060514..2060894 | + | 381 | WP_060855141.1 | phage tail assembly chaperone family protein, TAC | - |
| LQ100_RS09980 () | 2061005..2061181 | + | 177 | WP_196491839.1 | hypothetical protein | - |
| LQ100_RS09985 () | 2061249..2061536 | + | 288 | WP_046671179.1 | hypothetical protein | - |
| LQ100_RS09990 () | 2061592..2064066 | + | 2475 | WP_060855142.1 | phage tail tape measure protein | - |
| LQ100_RS09995 () | 2064108..2064284 | + | 177 | WP_155643922.1 | hypothetical protein | - |
| LQ100_RS10000 () | 2064629..2065222 | + | 594 | WP_181826154.1 | hypothetical protein | - |
| LQ100_RS10005 () | 2065222..2065806 | + | 585 | WP_060855145.1 | hypothetical protein | - |
| LQ100_RS10010 () | 2065813..2066211 | + | 399 | WP_060855146.1 | hypothetical protein | - |
| LQ100_RS10015 () | 2066211..2068931 | + | 2721 | WP_060855147.1 | DUF1983 domain-containing protein | - |
| LQ100_RS10020 () | 2068931..2069875 | + | 945 | WP_060855148.1 | DUF6453 family protein | - |
| LQ100_RS10025 () | 2069885..2070976 | + | 1092 | WP_230141606.1 | tail fiber domain-containing protein | - |
| LQ100_RS10030 () | 2071156..2071665 | - | 510 | WP_081092925.1 | Galactoside O-acetyltransferase | VF |
| LQ100_RS10035 () | 2071953..2072060 | - | 108 | Protein_1963 | DinI-like family protein | - |
| LQ100_RS10040 () | 2072413..2073054 | + | 642 | WP_003034937.1 | protein-serine/threonine phosphatase | - |
| LQ100_RS10045 () | 2073055..2073246 | - | 192 | WP_003841978.1 | YebW family protein | - |
| LQ100_RS10050 () | 2073349..2073585 | - | 237 | WP_029139506.1 | YebV family protein | - |
| LQ100_RS10055 () | 2073686..2075074 | - | 1389 | WP_060854927.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LQ100_RS10060 () | 2075187..2077820 | - | 2634 | WP_003034947.1 | Intermembrane transport protein YebT | VF |
| LQ100_RS10065 () | 2077789..2079072 | - | 1284 | WP_003841983.1 | membrane integrity lipid transport subunit YebS | - |
| LQ100_RS10070 () | 2079201..2079698 | + | 498 | WP_230141611.1 | GAF domain-containing protein | - |
| LQ100_RS10075 () | 2079795..2080481 | + | 687 | WP_003034957.1 | RNA chaperone ProQ | - |
| LQ100_RS10080 () | 2080501..2082549 | + | 2049 | WP_003034960.1 | carboxy terminal-processing peptidase | - |
| LQ100_RS10085 () | 2082742..2083623 | + | 882 | WP_003034964.1 | protease HtpX | - |
| LQ100_RS10090 () | 2083670..2085043 | - | 1374 | WP_048232221.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|