MGE detailed information
MGE type: Prophage MGE length: 40285 bp
Accession: NZ_OW707734 Location: 3747370..3787654 Organism: Salmonella enterica subsp. enterica serovar Typhi strain BRD948 Replicon: chromosome
Accession: NZ_OW707734 Location: 3747370..3787654 Organism: Salmonella enterica subsp. enterica serovar Typhi strain BRD948 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBX04_RS18575 | 3742883..3743380 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| NBX04_RS18580 | 3743509..3744792 | + | 1284 | WP_001207300.1 | membrane integrity lipid transport subunit YebS | - |
| NBX04_RS18585 | 3744761..3747394 | + | 2634 | WP_001521100.1 | PqiB family protein | - |
| NBX04_RS18590 | 3747472..3748911 | + | 1440 | WP_010989184.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NBX04_RS18595 | 3749029..3749265 | + | 237 | WP_024131167.1 | YebV family protein | - |
| NBX04_RS18600 | 3749376..3749567 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| NBX04_RS18605 | 3749586..3750236 | - | 651 | WP_000986169.1 | protein-serine/threonine phosphatase | - |
| NBX04_RS18610 | 3750460..3750624 | - | 165 | WP_001134857.1 | hypothetical protein | - |
| NBX04_RS18615 | 3750909..3751630 | - | 722 | Protein_3632 | Guanine nucleotide exchange factor sopE2 | VF |
| NBX04_RS18620 | 3752314..3752709 | + | 396 | WP_000422884.1 | DUF1398 domain-containing protein | - |
| NBX04_RS18625 | 3753038..3753514 | + | 477 | WP_000030950.1 | hypothetical protein | - |
| NBX04_RS18630 | 3753902..3754321 | - | 420 | WP_000354403.1 | GNAT family N-acetyltransferase | - |
| NBX04_RS18635 | 3754692..3754958 | + | 267 | WP_010989185.1 | hypothetical protein | - |
| NBX04_RS18640 | 3755127..3755267 | + | 141 | WP_031624337.1 | hypothetical protein | - |
| NBX04_RS18645 | 3755243..3756513 | - | 1271 | Protein_3638 | IS256 family transposase ISEc39 | Transposase |
| NBX04_RS18650 | 3756583..3757004 | + | 422 | Protein_3639 | tyrosine-type recombinase/integrase | - |
| NBX04_RS18655 | 3758303..3759217 | + | 915 | WP_001233444.1 | DMT family transporter | - |
| NBX04_RS18660 | 3759350..3759508 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| NBX04_RS18665 | 3759518..3760132 | + | 615 | WP_000848063.1 | disulfide bond formation protein B | - |
| NBX04_RS18670 | 3760541..3762520 | - | 1980 | WP_001237518.1 | alkyl sulfatase dimerization domain-containing protein | - |
| NBX04_RS18675 | 3762916..3764046 | + | 1131 | WP_000529513.1 | GGDEF domain-containing protein | - |
| NBX04_RS18680 | 3764332..3764727 | - | 396 | Protein_3645 | DUF977 family protein | - |
| NBX04_RS18685 | 3764740..3764850 | - | 111 | Protein_3646 | replication protein | - |
| NBX04_RS18690 | 3764851..3765212 | + | 362 | Protein_3647 | recombinase RecT | - |
| NBX04_RS18695 | 3765211..3765519 | + | 309 | Protein_3648 | hypothetical protein ; Integrase | Integrase |
| - | 3765638..3765781 | + | 144 | - | - | Antitoxin Detail |
| - | 3765640..3765742 | - | 103 | - | - | Toxin Detail |
| NBX04_RS18700 | 3765883..3766236 | - | 354 | WP_000722366.1 | YebY family protein | - |
| NBX04_RS18705 | 3766253..3767128 | - | 876 | WP_000979693.1 | copper homeostasis membrane protein CopD | - |
| NBX04_RS18710 | 3767129..3767503 | - | 375 | WP_001681742.1 | CopC domain-containing protein YobA | - |
| NBX04_RS18715 | 3767641..3767871 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| NBX04_RS18720 | 3767979..3768635 | + | 657 | WP_000100250.1 | carbon-nitrogen hydrolase family protein | - |
| NBX04_RS18725 | 3768659..3769357 | + | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| NBX04_RS18730 | 3769394..3771445 | - | 2052 | WP_000936997.1 | oligopeptidase B | - |
| NBX04_RS18735 | 3771659..3772318 | - | 660 | WP_000024713.1 | tellurite resistance TerB family protein | - |
| NBX04_RS18740 | 3772412..3772765 | - | 354 | WP_001042123.1 | protein YebF | - |
| NBX04_RS18745 | 3772833..3773123 | - | 291 | WP_000257728.1 | DNA damage-inducible protein YebG | - |
| NBX04_RS18750 | 3773254..3774432 | + | 1179 | WP_000173426.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NBX04_RS18755 | 3774532..3775173 | - | 642 | WP_000800493.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NBX04_RS18760 | 3775211..3777022 | - | 1812 | WP_001069124.1 | phosphogluconate dehydratase | - |
| NBX04_RS18765 | 3777257..3778732 | - | 1476 | WP_000301712.1 | glucose-6-phosphate dehydrogenase | - |
| NBX04_RS18770 | 3779074..3779943 | + | 870 | WP_001056719.1 | MurR/RpiR family transcriptional regulator | - |
| NBX04_RS18775 | 3780067..3781509 | + | 1443 | WP_000091158.1 | pyruvate kinase | - |
| NBX04_RS18780 | 3781582..3782553 | - | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| NBX04_RS18785 | 3782670..3783989 | - | 1320 | WP_001184019.1 | murein DD-endopeptidase MepM | - |
| NBX04_RS18790 | 3784005..3784949 | - | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| NBX04_RS18795 | 3785028..3785783 | + | 756 | WP_000203015.1 | Zinc import ATP-binding protein ZnuC | VF |
| NBX04_RS18800 | 3785780..3786565 | + | 786 | WP_000571518.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| NBX04_RS18805 | 3786644..3787654 | - | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| NBX04_RS18810 | 3787663..3788274 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| NBX04_RS18815 | 3788634..3789326 | - | 693 | WP_000227314.1 | hypothetical protein | - |
| NBX04_RS18820 | 3789536..3790135 | + | 600 | WP_000716741.1 | YebB family permuted papain-like enzyme | - |
| NBX04_RS18825 | 3790137..3790658 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| NBX04_RS18830 | 3790695..3791435 | - | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| NBX04_RS18835 | 3791465..3791917 | - | 453 | WP_000653696.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|