MGE detailed information
MGE type: Genomic_island MGE length: 16152 bp
Accession: NZ_OW707734 Location: 1813872..1830023 Organism: Salmonella enterica subsp. enterica serovar Typhi strain BRD948 Replicon: chromosome
Accession: NZ_OW707734 Location: 1813872..1830023 Organism: Salmonella enterica subsp. enterica serovar Typhi strain BRD948 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBX04_RS08810 | 1809012..1810110 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| NBX04_RS08815 | 1810120..1811637 | + | 1518 | WP_000003338.1 | lysine--tRNA ligase | - |
| NBX04_RS08820 | 1811713..1812258 | - | 546 | WP_000133998.1 | isopentenyl-diphosphate Delta-isomerase | - |
| NBX04_RS08825 | 1812523..1813281 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| NBX04_RS08835 | 1813569..1815188 | + | 1620 | WP_014341476.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| NBX04_RS08840 | 1816124..1816843 | + | 720 | WP_000082599.1 | Rha family transcriptional regulator | - |
| NBX04_RS08845 | 1816847..1817050 | + | 204 | WP_000184036.1 | hypothetical protein | - |
| NBX04_RS08850 | 1817133..1817588 | + | 456 | WP_223229661.1 | hypothetical protein | - |
| NBX04_RS08855 | 1817690..1818811 | + | 1122 | WP_000028980.1 | hypothetical protein | - |
| NBX04_RS08860 | 1819444..1820250 | - | 807 | WP_077905073.1 | DUF1460 domain-containing protein | - |
| NBX04_RS08865 | 1820525..1820776 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| NBX04_RS08870 | 1820953..1821180 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| NBX04_RS08875 | 1821180..1821578 | + | 399 | WP_000911334.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| NBX04_RS08880 | 1822385..1822921 | + | 537 | WP_001038500.1 | Attachment invasion locus protein | VF |
| NBX04_RS08885 | 1822968..1823600 | + | 633 | WP_000835268.1 | YfdX family protein | - |
| NBX04_RS08890 | 1824319..1824900 | + | 582 | WP_001244646.1 | putative fimbrial-like protein YbgD | VF |
| NBX04_RS08895 | 1825020..1827509 | + | 2490 | WP_000705516.1 | Outer membrane usher protein PapC | VF |
| NBX04_RS08900 | 1827550..1828293 | + | 744 | WP_000798497.1 | Chaperone protein PapD | VF |
| NBX04_RS08905 | 1828290..1829366 | + | 1077 | WP_000141334.1 | hypothetical protein | - |
| NBX04_RS08910 | 1829511..1830023 | + | 513 | WP_000336256.1 | CaiF/GrlA family transcriptional regulator | - |
| NBX04_RS08915 | 1830010..1830768 | + | 759 | WP_000134788.1 | transcriptional regulator | - |
| NBX04_RS08920 | 1830978..1831850 | - | 873 | Protein_1733 | nickel/cobalt efflux protein RcnA | - |
| NBX04_RS08925 | 1831972..1832244 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| NBX04_RS08930 | 1832275..1833504 | - | 1230 | WP_000036836.1 | amino acid permease | - |
| NBX04_RS08935 | 1833646..1834101 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|