MGE detailed information
MGE type: Genomic_island MGE length: 16897 bp
Accession: NZ_OW706512 Location: 2334058..2350954 Organism: Salmonella enterica subsp. enterica serovar Typhi strain BRD948 Replicon: chromosome
Accession: NZ_OW706512 Location: 2334058..2350954 Organism: Salmonella enterica subsp. enterica serovar Typhi strain BRD948 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBW89_RS11800 | 2329758..2330621 | - | 864 | WP_001270764.1 | LysR family transcriptional regulator | - |
| NBW89_RS11805 | 2330725..2331180 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| NBW89_RS11810 | 2331322..2332551 | + | 1230 | WP_000036836.1 | amino acid permease | - |
| NBW89_RS11815 | 2332582..2332854 | - | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| NBW89_RS11820 | 2332976..2333848 | + | 873 | Protein_2314 | nickel/cobalt efflux protein RcnA | - |
| NBW89_RS11825 | 2334058..2334816 | - | 759 | WP_000134788.1 | transcriptional regulator | - |
| NBW89_RS11830 | 2334803..2335315 | - | 513 | WP_000336256.1 | CaiF/GrlA family transcriptional regulator | - |
| NBW89_RS11835 | 2335460..2336536 | - | 1077 | WP_000141334.1 | hypothetical protein | - |
| NBW89_RS11840 | 2336533..2337276 | - | 744 | WP_000798497.1 | Chaperone protein PapD | VF |
| NBW89_RS11845 | 2337317..2339806 | - | 2490 | WP_000705516.1 | Outer membrane usher protein PapC | VF |
| NBW89_RS11850 | 2339926..2340507 | - | 582 | WP_001244646.1 | putative fimbrial-like protein YbgD | VF |
| NBW89_RS11855 | 2341226..2341858 | - | 633 | WP_000835268.1 | YfdX family protein | - |
| NBW89_RS11860 | 2341905..2342441 | - | 537 | WP_001038500.1 | Attachment invasion locus protein | VF |
| NBW89_RS11865 | 2343248..2343646 | - | 399 | WP_000911334.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| NBW89_RS11870 | 2343646..2343873 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| NBW89_RS11875 | 2344050..2344301 | + | 252 | WP_001540858.1 | hypothetical protein | - |
| NBW89_RS11880 | 2344576..2345382 | + | 807 | WP_077905073.1 | DUF1460 domain-containing protein | - |
| NBW89_RS11885 | 2346015..2347136 | - | 1122 | WP_000028980.1 | hypothetical protein | - |
| NBW89_RS11890 | 2347238..2347693 | - | 456 | WP_223229661.1 | hypothetical protein | - |
| NBW89_RS11895 | 2347776..2347979 | - | 204 | WP_000184036.1 | hypothetical protein | - |
| NBW89_RS11900 | 2347983..2348702 | - | 720 | WP_000082599.1 | Rha family transcriptional regulator | - |
| NBW89_RS11905 | 2349638..2351257 | - | 1620 | WP_014341476.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| NBW89_RS11915 | 2351545..2352303 | - | 759 | WP_000244328.1 | amidase activator ActS | - |
| NBW89_RS11920 | 2352568..2353113 | + | 546 | WP_000133998.1 | isopentenyl-diphosphate Delta-isomerase | - |
| NBW89_RS11925 | 2353189..2354706 | - | 1518 | WP_000003338.1 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|