MGE detailed information
MGE type: Genomic_island MGE length: 16897 bp
Accession: NZ_OW704291 Location: 4273559..4290455 Organism: Salmonella enterica subsp. enterica serovar Typhi strain BRD948 Replicon: chromosome
Accession: NZ_OW704291 Location: 4273559..4290455 Organism: Salmonella enterica subsp. enterica serovar Typhi strain BRD948 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBX00_RS20870 | 4269258..4270121 | - | 864 | WP_001270764.1 | LysR family transcriptional regulator | - |
| NBX00_RS20875 | 4270225..4270680 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| NBX00_RS20880 | 4270822..4272051 | + | 1230 | WP_000036836.1 | amino acid permease | - |
| NBX00_RS20885 | 4272082..4272354 | - | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| NBX00_RS20890 | 4272477..4273349 | + | 873 | Protein_4087 | nickel/cobalt efflux protein RcnA | - |
| NBX00_RS20895 | 4273559..4274317 | - | 759 | WP_000134788.1 | transcriptional regulator | - |
| NBX00_RS20900 | 4274304..4274816 | - | 513 | WP_000336256.1 | CaiF/GrlA family transcriptional regulator | - |
| NBX00_RS20905 | 4274961..4276037 | - | 1077 | WP_000141334.1 | hypothetical protein | - |
| NBX00_RS20910 | 4276034..4276777 | - | 744 | WP_000798497.1 | Chaperone protein PapD | VF |
| NBX00_RS20915 | 4276818..4279307 | - | 2490 | WP_000705516.1 | Outer membrane usher protein PapC | VF |
| NBX00_RS20920 | 4279427..4280008 | - | 582 | WP_001244646.1 | putative fimbrial-like protein YbgD | VF |
| NBX00_RS20925 | 4280727..4281359 | - | 633 | WP_000835268.1 | YfdX family protein | - |
| NBX00_RS20930 | 4281406..4281942 | - | 537 | WP_001038500.1 | Attachment invasion locus protein | VF |
| NBX00_RS20935 | 4282749..4283147 | - | 399 | WP_000911334.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| NBX00_RS20940 | 4283147..4283374 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| NBX00_RS20945 | 4283551..4283802 | + | 252 | WP_001540858.1 | hypothetical protein | - |
| NBX00_RS20950 | 4284077..4284883 | + | 807 | WP_077905073.1 | DUF1460 domain-containing protein | - |
| NBX00_RS20955 | 4285516..4286637 | - | 1122 | WP_000028980.1 | hypothetical protein | - |
| NBX00_RS20960 | 4286739..4287194 | - | 456 | WP_223229661.1 | hypothetical protein | - |
| NBX00_RS20965 | 4287277..4287480 | - | 204 | WP_000184036.1 | hypothetical protein | - |
| NBX00_RS20970 | 4287484..4288203 | - | 720 | WP_000082599.1 | Rha family transcriptional regulator | - |
| NBX00_RS20975 | 4289139..4290758 | - | 1620 | WP_014341476.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| NBX00_RS20985 | 4291046..4291804 | - | 759 | WP_000244328.1 | amidase activator ActS | - |
| NBX00_RS20990 | 4292069..4292614 | + | 546 | WP_000133998.1 | isopentenyl-diphosphate Delta-isomerase | - |
| NBX00_RS20995 | 4292690..4294207 | - | 1518 | WP_000003338.1 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|