MGE detailed information
MGE type: Genomic_island MGE length: 17578 bp
Accession: NZ_OU943338 Location: 814788..832365 Organism: Salmonella enterica subsp. enterica serovar Typhi strain MDUST348 Replicon: chromosome
Accession: NZ_OU943338 Location: 814788..832365 Organism: Salmonella enterica subsp. enterica serovar Typhi strain MDUST348 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AFF66_RS03965 (SAMEA2158835_00809) | 809928..811026 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| AFF66_RS03970 (SAMEA2158835_00810) | 811036..812553 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| AFF66_RS03975 (SAMEA2158835_00811) | 812629..813174 | - | 546 | WP_000133998.1 | isopentenyl-diphosphate Delta-isomerase | - |
| AFF66_RS03980 (SAMEA2158835_00812) | 813439..814197 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| AFF66_RS03990 (SAMEA2158835_00814) | 814485..816104 | + | 1620 | WP_014341476.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| AFF66_RS03995 (SAMEA2158835_00815) | 817040..817759 | + | 720 | WP_000082599.1 | Rha family transcriptional regulator | - |
| AFF66_RS04000 (SAMEA2158835_00816) | 817763..817966 | + | 204 | WP_000184036.1 | hypothetical protein | - |
| AFF66_RS04005 (SAMEA2158835_00817) | 818049..818504 | + | 456 | WP_223229661.1 | hypothetical protein | - |
| AFF66_RS04010 (SAMEA2158835_00818) | 818606..819727 | + | 1122 | WP_000028980.1 | hypothetical protein | - |
| AFF66_RS04015 (SAMEA2158835_00819) | 820338..821144 | - | 807 | WP_077942019.1 | DUF1460 domain-containing protein | - |
| AFF66_RS04020 (SAMEA2158835_00820) | 821419..821670 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| AFF66_RS04025 (SAMEA2158835_00821) | 821847..822074 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| AFF66_RS04030 (SAMEA2158835_00822) | 822074..822472 | + | 399 | WP_000911334.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| AFF66_RS04035 (SAMEA2158835_00824) | 823279..823815 | + | 537 | WP_001038500.1 | Attachment invasion locus protein | VF |
| AFF66_RS04040 (SAMEA2158835_00825) | 823862..824494 | + | 633 | WP_000835268.1 | YfdX family protein | - |
| AFF66_RS04045 (SAMEA2158835_00826) | 825213..825794 | + | 582 | WP_001244646.1 | putative fimbrial-like protein YbgD | VF |
| AFF66_RS04050 (SAMEA2158835_00827) | 825914..828403 | + | 2490 | WP_000705516.1 | Outer membrane usher protein PapC | VF |
| AFF66_RS04055 (SAMEA2158835_00828) | 828444..829187 | + | 744 | WP_000798497.1 | Chaperone protein PapD | VF |
| AFF66_RS04060 (SAMEA2158835_00829) | 829184..830260 | + | 1077 | WP_000141334.1 | hypothetical protein | - |
| AFF66_RS04065 (SAMEA2158835_00830) | 830405..830917 | + | 513 | WP_000336256.1 | CaiF/GrlA family transcriptional regulator | - |
| AFF66_RS04070 (SAMEA2158835_00831) | 830904..831662 | + | 759 | WP_000134788.1 | transcriptional regulator | - |
| AFF66_RS04075 | 831872..832762 | - | 891 | Protein_799 | nickel/cobalt efflux protein RcnA | - |
| AFF66_RS04080 (SAMEA2158835_00835) | 832884..833156 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| AFF66_RS04085 (SAMEA2158835_00836) | 833187..834416 | - | 1230 | WP_000036836.1 | amino acid permease | - |
| AFF66_RS04090 (SAMEA2158835_00837) | 834558..835013 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| AFF66_RS04095 (SAMEA2158835_00838) | 835117..835980 | + | 864 | WP_001270764.1 | LysR family transcriptional regulator | - |
| AFF66_RS04100 (SAMEA2158835_00839) | 836103..837281 | + | 1179 | WP_000665983.1 | acetyl-CoA C-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|