MGE detailed information
MGE type: Prophage MGE length: 36995 bp
Accession: NZ_OU943338 Location: 2726379..2763373 Organism: Salmonella enterica subsp. enterica serovar Typhi strain MDUST348 Replicon: chromosome
Accession: NZ_OU943338 Location: 2726379..2763373 Organism: Salmonella enterica subsp. enterica serovar Typhi strain MDUST348 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AFF66_RS13665 (SAMEA2158835_02731) | 2722108..2722566 | + | 459 | WP_000156273.1 | DUF986 family protein | - |
| AFF66_RS13670 (SAMEA2158835_02732) | 2722976..2723542 | + | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| AFF66_RS13675 (SAMEA2158835_02733) | 2723539..2724348 | - | 810 | WP_000010934.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| AFF66_RS13680 (SAMEA2158835_02734) | 2724414..2726159 | - | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| AFF66_RS13685 (SAMEA2158835_02735) | 2726379..2726588 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| AFF66_RS13690 | 2726601..2726744 | - | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| AFF66_RS13695 (SAMEA2158835_02736) | 2727393..2727680 | - | 288 | WP_001000660.1 | YebO family protein | - |
| AFF66_RS13700 (SAMEA2158835_02737) | 2727751..2727894 | - | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| AFF66_RS13705 (SAMEA2158835_02738) | 2728047..2728286 | + | 240 | WP_001236777.1 | invasion protein YobH | - |
| AFF66_RS13710 (SAMEA2158835_02739) | 2728498..2729289 | - | 792 | WP_001262197.1 | DNA-binding transcriptional regulator KdgR | - |
| AFF66_RS13715 | 2729465..2730837 | + | 1373 | Protein_2685 | MFS transporter | - |
| AFF66_RS13720 (SAMEA2158835_02742) | 2730885..2731766 | - | 882 | WP_000984498.1 | protease HtpX | - |
| AFF66_RS13725 (SAMEA2158835_02743) | 2731959..2734007 | - | 2049 | WP_001091235.1 | carboxy terminal-processing peptidase | - |
| AFF66_RS13730 (SAMEA2158835_02744) | 2734027..2734713 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| AFF66_RS13735 (SAMEA2158835_02745) | 2734811..2735308 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| AFF66_RS13740 (SAMEA2158835_02746) | 2735437..2736720 | + | 1284 | WP_001207300.1 | membrane integrity lipid transport subunit YebS | - |
| AFF66_RS13745 (SAMEA2158835_02747) | 2736689..2739322 | + | 2634 | WP_001521100.1 | Intermembrane transport protein YebT | VF |
| AFF66_RS13750 (SAMEA2158835_02748) | 2739400..2740839 | + | 1440 | WP_010989184.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| AFF66_RS13755 (SAMEA2158835_02749) | 2740957..2741193 | + | 237 | WP_024131167.1 | YebV family protein | - |
| AFF66_RS13760 (SAMEA2158835_02750) | 2741304..2741495 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| AFF66_RS13765 (SAMEA2158835_02751) | 2741514..2742164 | - | 651 | WP_050188355.1 | protein-serine/threonine phosphatase | - |
| AFF66_RS13770 (SAMEA2158835_02753) | 2742388..2742552 | - | 165 | WP_001134857.1 | hypothetical protein | - |
| AFF66_RS13775 | 2742837..2743558 | - | 722 | Protein_2697 | Guanine nucleotide exchange factor sopE2 | VF |
| AFF66_RS13780 (SAMEA2158835_02755) | 2744242..2744637 | + | 396 | WP_000422884.1 | DUF1398 domain-containing protein | - |
| AFF66_RS13785 (SAMEA2158835_02756) | 2744966..2745442 | + | 477 | WP_000030950.1 | hypothetical protein | - |
| AFF66_RS13790 (SAMEA2158835_02757) | 2745830..2746249 | - | 420 | WP_000354403.1 | GNAT family N-acetyltransferase | - |
| AFF66_RS13795 | 2746620..2746886 | + | 267 | WP_010989185.1 | hypothetical protein | - |
| AFF66_RS13800 | 2747055..2747195 | + | 141 | WP_031624337.1 | hypothetical protein | - |
| AFF66_RS13805 (SAMEA2158835_02759) | 2747171..2748441 | - | 1271 | Protein_2703 | IS256 family transposase ISEc39 | Transposase |
| AFF66_RS13810 | 2748511..2748932 | + | 422 | Protein_2704 | tyrosine-type recombinase/integrase | - |
| AFF66_RS13815 (SAMEA2158835_02761) | 2750231..2751145 | + | 915 | WP_001233444.1 | DMT family transporter | - |
| AFF66_RS13820 (SAMEA2158835_02762) | 2751278..2751436 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| AFF66_RS13825 (SAMEA2158835_02763) | 2751446..2752060 | + | 615 | WP_000848063.1 | disulfide bond formation protein B | - |
| AFF66_RS13830 (SAMEA2158835_02765) | 2752469..2754448 | - | 1980 | WP_001237519.1 | alkyl sulfatase dimerization domain-containing protein | - |
| AFF66_RS13835 (SAMEA2158835_02766) | 2754844..2755974 | + | 1131 | WP_000529513.1 | GGDEF domain-containing protein | - |
| AFF66_RS13840 | 2756260..2756655 | - | 396 | Protein_2710 | DUF977 family protein | - |
| AFF66_RS13845 | 2756668..2756778 | - | 111 | Protein_2711 | replication protein | - |
| AFF66_RS13850 | 2756779..2757140 | + | 362 | Protein_2712 | recombinase RecT | - |
| AFF66_RS13855 (SAMEA2158835_02768) | 2757139..2757447 | + | 309 | Protein_2713 | hypothetical protein ; Integrase | Integrase |
| - | 2757566..2757709 | + | 144 | - | - | Antitoxin Detail |
| - | 2757568..2757670 | - | 103 | - | - | Toxin Detail |
| AFF66_RS13860 (SAMEA2158835_02769) | 2757811..2758164 | - | 354 | WP_000722366.1 | YebY family protein | - |
| AFF66_RS13865 (SAMEA2158835_02770) | 2758181..2759056 | - | 876 | WP_000979693.1 | copper homeostasis membrane protein CopD | - |
| AFF66_RS13870 (SAMEA2158835_02771) | 2759057..2759431 | - | 375 | WP_001681742.1 | CopC domain-containing protein YobA | - |
| AFF66_RS13875 (SAMEA2158835_02772) | 2759569..2759799 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| AFF66_RS13880 (SAMEA2158835_02773) | 2759907..2760563 | + | 657 | WP_000100250.1 | carbon-nitrogen hydrolase family protein | - |
| AFF66_RS13885 (SAMEA2158835_02774) | 2760587..2761285 | + | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| AFF66_RS13890 (SAMEA2158835_02775) | 2761322..2763373 | - | 2052 | WP_000936997.1 | oligopeptidase B | - |
| AFF66_RS13895 (SAMEA2158835_02776) | 2763587..2764246 | - | 660 | WP_000024713.1 | tellurite resistance TerB family protein | - |
| AFF66_RS13900 (SAMEA2158835_02777) | 2764340..2764693 | - | 354 | WP_001042123.1 | protein YebF | - |
| AFF66_RS13905 (SAMEA2158835_02778) | 2764761..2765051 | - | 291 | WP_000257728.1 | DNA damage-inducible protein YebG | - |
| AFF66_RS13910 (SAMEA2158835_02779) | 2765182..2766360 | + | 1179 | WP_000173426.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| AFF66_RS13915 (SAMEA2158835_02780) | 2766460..2767101 | - | 642 | WP_000800493.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|