MGE detailed information
MGE type: Prophage MGE length: 53204 bp
Accession: NZ_OU943337 Location: 1952681..2005884 Organism: Salmonella enterica subsp. enterica serovar Typhi strain MDUST255 Replicon: chromosome
Accession: NZ_OU943337 Location: 1952681..2005884 Organism: Salmonella enterica subsp. enterica serovar Typhi strain MDUST255 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AE465_RS09410 (SAMEA2145578_01910) | 1948418..1948870 | + | 453 | WP_000653696.1 | dihydroneopterin triphosphate diphosphatase | - |
| AE465_RS09415 (SAMEA2145578_01911) | 1948900..1949640 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| AE465_RS09420 (SAMEA2145578_01912) | 1949677..1950198 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| AE465_RS09425 (SAMEA2145578_01913) | 1950200..1950799 | - | 600 | WP_000716741.1 | YebB family permuted papain-like enzyme | - |
| AE465_RS09430 (SAMEA2145578_01914) | 1951009..1951701 | + | 693 | WP_000227314.1 | hypothetical protein | - |
| AE465_RS09435 (SAMEA2145578_01915) | 1952061..1952672 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| AE465_RS09440 (SAMEA2145578_01916) | 1952681..1953691 | + | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| AE465_RS09445 (SAMEA2145578_01917) | 1953770..1954555 | - | 786 | WP_000571518.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| AE465_RS09450 (SAMEA2145578_01918) | 1954552..1955307 | - | 756 | WP_000203015.1 | Zinc import ATP-binding protein ZnuC | VF |
| AE465_RS09455 (SAMEA2145578_01919) | 1955386..1956330 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| AE465_RS09460 (SAMEA2145578_01920) | 1956346..1957665 | + | 1320 | WP_001184019.1 | murein DD-endopeptidase MepM | - |
| AE465_RS09465 (SAMEA2145578_01921) | 1957782..1958753 | + | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| AE465_RS09470 (SAMEA2145578_01922) | 1958826..1960268 | - | 1443 | WP_000091158.1 | pyruvate kinase | - |
| AE465_RS09475 (SAMEA2145578_01923) | 1960392..1961261 | - | 870 | WP_001056719.1 | MurR/RpiR family transcriptional regulator | - |
| AE465_RS09480 (SAMEA2145578_01924) | 1961603..1963078 | + | 1476 | WP_000301712.1 | glucose-6-phosphate dehydrogenase | - |
| AE465_RS09485 (SAMEA2145578_01925) | 1963313..1965124 | + | 1812 | WP_001069124.1 | phosphogluconate dehydratase | - |
| AE465_RS09490 (SAMEA2145578_01926) | 1965162..1965803 | + | 642 | WP_000800493.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| AE465_RS09495 (SAMEA2145578_01927) | 1965903..1967081 | - | 1179 | WP_000173426.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| AE465_RS09500 (SAMEA2145578_01928) | 1967212..1967502 | + | 291 | WP_000257728.1 | DNA damage-inducible protein YebG | - |
| AE465_RS09505 (SAMEA2145578_01929) | 1967570..1967923 | + | 354 | WP_001042123.1 | protein YebF | - |
| AE465_RS09510 (SAMEA2145578_01930) | 1968017..1968676 | + | 660 | WP_000024713.1 | tellurite resistance TerB family protein | - |
| AE465_RS09515 (SAMEA2145578_01931) | 1968890..1970941 | + | 2052 | WP_000936997.1 | oligopeptidase B | - |
| AE465_RS09520 (SAMEA2145578_01932) | 1970978..1971676 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| AE465_RS09525 (SAMEA2145578_01933) | 1971700..1972356 | - | 657 | WP_000100250.1 | carbon-nitrogen hydrolase family protein | - |
| AE465_RS09530 (SAMEA2145578_01934) | 1972464..1972694 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| AE465_RS09535 (SAMEA2145578_01935) | 1972832..1973206 | + | 375 | WP_001681742.1 | CopC domain-containing protein YobA | - |
| AE465_RS09540 (SAMEA2145578_01936) | 1973207..1974082 | + | 876 | WP_000979693.1 | copper homeostasis membrane protein CopD | - |
| AE465_RS09545 (SAMEA2145578_01937) | 1974099..1974452 | + | 354 | WP_000722366.1 | YebY family protein | - |
| - | 1974554..1974697 | - | 144 | - | - | Antitoxin Detail |
| - | 1974593..1974695 | + | 103 | - | - | Toxin Detail |
| AE465_RS09550 (SAMEA2145578_01938) | 1974816..1975124 | - | 309 | Protein_1866 | hypothetical protein ; Integrase | Integrase |
| AE465_RS09555 | 1975123..1975484 | - | 362 | Protein_1867 | recombinase RecT | - |
| AE465_RS09560 | 1975485..1975595 | + | 111 | Protein_1868 | replication protein | - |
| AE465_RS09565 | 1975608..1976003 | + | 396 | Protein_1869 | DUF977 family protein | - |
| AE465_RS09570 (SAMEA2145578_01940) | 1976289..1977419 | - | 1131 | WP_000529513.1 | GGDEF domain-containing protein | - |
| AE465_RS09575 (SAMEA2145578_01941) | 1977815..1979794 | + | 1980 | WP_001237519.1 | alkyl sulfatase dimerization domain-containing protein | - |
| AE465_RS09580 (SAMEA2145578_01943) | 1980203..1980817 | - | 615 | WP_000848063.1 | disulfide bond formation protein B | - |
| AE465_RS09585 (SAMEA2145578_01944) | 1980827..1980985 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| AE465_RS09590 (SAMEA2145578_01945) | 1981118..1982032 | - | 915 | WP_001233444.1 | DMT family transporter | - |
| AE465_RS09595 | 1983331..1983752 | - | 422 | Protein_1875 | tyrosine-type recombinase/integrase | - |
| AE465_RS09600 (SAMEA2145578_01947) | 1983822..1985092 | + | 1271 | Protein_1876 | IS256 family transposase ISEc39 | Transposase |
| AE465_RS09605 | 1985068..1985208 | - | 141 | WP_031624337.1 | hypothetical protein | - |
| AE465_RS09610 | 1985377..1985643 | - | 267 | WP_010989185.1 | hypothetical protein | - |
| AE465_RS09615 (SAMEA2145578_01949) | 1986014..1986433 | + | 420 | WP_000354403.1 | GNAT family N-acetyltransferase | - |
| AE465_RS09620 (SAMEA2145578_01950) | 1986821..1987297 | - | 477 | WP_000030950.1 | hypothetical protein | - |
| AE465_RS09625 (SAMEA2145578_01951) | 1987626..1988021 | - | 396 | WP_000422884.1 | DUF1398 domain-containing protein | - |
| AE465_RS09630 (SAMEA2145578_01952) | 1988768..1989426 | + | 659 | Protein_1882 | Guanine nucleotide exchange factor sopE2 | VF |
| AE465_RS09635 (SAMEA2145578_01953) | 1989711..1989875 | + | 165 | WP_001134857.1 | hypothetical protein | - |
| AE465_RS09640 (SAMEA2145578_01955) | 1990099..1990749 | + | 651 | WP_000986169.1 | protein-serine/threonine phosphatase | - |
| AE465_RS09645 (SAMEA2145578_01956) | 1990768..1990959 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| AE465_RS09650 (SAMEA2145578_01957) | 1991070..1991306 | - | 237 | WP_024131167.1 | YebV family protein | - |
| AE465_RS09655 (SAMEA2145578_01958) | 1991424..1992863 | - | 1440 | WP_010989184.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| AE465_RS09660 (SAMEA2145578_01959) | 1992941..1995574 | - | 2634 | WP_001521100.1 | Intermembrane transport protein YebT | VF |
| AE465_RS09665 (SAMEA2145578_01960) | 1995543..1996826 | - | 1284 | WP_001207300.1 | membrane integrity lipid transport subunit YebS | - |
| AE465_RS09670 (SAMEA2145578_01961) | 1996955..1997452 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| AE465_RS09675 (SAMEA2145578_01962) | 1997550..1998236 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| AE465_RS09680 (SAMEA2145578_01963) | 1998256..2000304 | + | 2049 | WP_001091235.1 | carboxy terminal-processing peptidase | - |
| AE465_RS09685 (SAMEA2145578_01964) | 2000497..2001378 | + | 882 | WP_000984498.1 | protease HtpX | - |
| AE465_RS09690 | 2001426..2002798 | - | 1373 | Protein_1894 | MFS transporter | - |
| AE465_RS09695 (SAMEA2145578_01967) | 2002974..2003765 | + | 792 | WP_001262197.1 | DNA-binding transcriptional regulator KdgR | - |
| AE465_RS09700 (SAMEA2145578_01968) | 2003977..2004216 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| AE465_RS09705 (SAMEA2145578_01969) | 2004369..2004512 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| AE465_RS09710 (SAMEA2145578_01970) | 2004583..2004870 | + | 288 | WP_001000660.1 | YebO family protein | - |
| AE465_RS09715 | 2005519..2005662 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| AE465_RS09720 (SAMEA2145578_01971) | 2005675..2005884 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| AE465_RS09725 (SAMEA2145578_01972) | 2006104..2007849 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| AE465_RS09730 (SAMEA2145578_01973) | 2007915..2008724 | + | 810 | WP_000010934.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| AE465_RS09735 (SAMEA2145578_01974) | 2008721..2009287 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| AE465_RS09740 (SAMEA2145578_01975) | 2009697..2010155 | - | 459 | WP_000156273.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|