MGE detailed information
MGE type: Prophage MGE length: 53204 bp
Accession: NZ_OU943336 Location: 1952740..2005943 Organism: Salmonella enterica subsp. enterica serovar Typhi strain MDUST305 Replicon: chromosome
Accession: NZ_OU943336 Location: 1952740..2005943 Organism: Salmonella enterica subsp. enterica serovar Typhi strain MDUST305 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEG13_RS09465 (SAMEA1964467_01908) | 1948477..1948929 | + | 453 | WP_000653696.1 | dihydroneopterin triphosphate diphosphatase | - |
| AEG13_RS09470 (SAMEA1964467_01909) | 1948959..1949699 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| AEG13_RS09475 (SAMEA1964467_01910) | 1949736..1950257 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| AEG13_RS09480 (SAMEA1964467_01911) | 1950259..1950858 | - | 600 | WP_000716741.1 | YebB family permuted papain-like enzyme | - |
| AEG13_RS09485 (SAMEA1964467_01912) | 1951068..1951760 | + | 693 | WP_000227314.1 | hypothetical protein | - |
| AEG13_RS09490 (SAMEA1964467_01913) | 1952120..1952731 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| AEG13_RS09495 (SAMEA1964467_01914) | 1952740..1953750 | + | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| AEG13_RS09500 (SAMEA1964467_01915) | 1953829..1954614 | - | 786 | WP_000571518.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| AEG13_RS09505 (SAMEA1964467_01916) | 1954611..1955366 | - | 756 | WP_000203015.1 | Zinc import ATP-binding protein ZnuC | VF |
| AEG13_RS09510 (SAMEA1964467_01917) | 1955445..1956389 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| AEG13_RS09515 (SAMEA1964467_01918) | 1956405..1957724 | + | 1320 | WP_001184019.1 | murein DD-endopeptidase MepM | - |
| AEG13_RS09520 (SAMEA1964467_01919) | 1957841..1958812 | + | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| AEG13_RS09525 (SAMEA1964467_01920) | 1958885..1960327 | - | 1443 | WP_000091158.1 | pyruvate kinase | - |
| AEG13_RS09530 (SAMEA1964467_01921) | 1960451..1961320 | - | 870 | WP_001056719.1 | MurR/RpiR family transcriptional regulator | - |
| AEG13_RS09535 (SAMEA1964467_01922) | 1961662..1963137 | + | 1476 | WP_000301712.1 | glucose-6-phosphate dehydrogenase | - |
| AEG13_RS09540 (SAMEA1964467_01923) | 1963372..1965183 | + | 1812 | WP_001069124.1 | phosphogluconate dehydratase | - |
| AEG13_RS09545 (SAMEA1964467_01924) | 1965221..1965862 | + | 642 | WP_000800493.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| AEG13_RS09550 (SAMEA1964467_01925) | 1965962..1967140 | - | 1179 | WP_000173426.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| AEG13_RS09555 (SAMEA1964467_01926) | 1967271..1967561 | + | 291 | WP_000257728.1 | DNA damage-inducible protein YebG | - |
| AEG13_RS09560 (SAMEA1964467_01927) | 1967629..1967982 | + | 354 | WP_001042123.1 | protein YebF | - |
| AEG13_RS09565 (SAMEA1964467_01928) | 1968076..1968735 | + | 660 | WP_000024713.1 | tellurite resistance TerB family protein | - |
| AEG13_RS09570 (SAMEA1964467_01929) | 1968949..1971000 | + | 2052 | WP_000936997.1 | oligopeptidase B | - |
| AEG13_RS09575 (SAMEA1964467_01930) | 1971037..1971735 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| AEG13_RS09580 (SAMEA1964467_01931) | 1971759..1972415 | - | 657 | WP_000100250.1 | carbon-nitrogen hydrolase family protein | - |
| AEG13_RS09585 (SAMEA1964467_01932) | 1972523..1972753 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| AEG13_RS09590 (SAMEA1964467_01933) | 1972891..1973265 | + | 375 | WP_001681742.1 | CopC domain-containing protein YobA | - |
| AEG13_RS09595 (SAMEA1964467_01934) | 1973266..1974141 | + | 876 | WP_000979693.1 | copper homeostasis membrane protein CopD | - |
| AEG13_RS09600 (SAMEA1964467_01935) | 1974158..1974511 | + | 354 | WP_000722366.1 | YebY family protein | - |
| - | 1974613..1974756 | - | 144 | - | - | Antitoxin Detail |
| - | 1974652..1974754 | + | 103 | - | - | Toxin Detail |
| AEG13_RS09605 (SAMEA1964467_01936) | 1974875..1975183 | - | 309 | Protein_1877 | hypothetical protein ; Integrase | Integrase |
| AEG13_RS09610 | 1975182..1975543 | - | 362 | Protein_1878 | recombinase RecT | - |
| AEG13_RS09615 | 1975544..1975654 | + | 111 | Protein_1879 | replication protein | - |
| AEG13_RS09620 | 1975667..1976062 | + | 396 | Protein_1880 | DUF977 family protein | - |
| AEG13_RS09625 (SAMEA1964467_01938) | 1976348..1977478 | - | 1131 | WP_000529513.1 | GGDEF domain-containing protein | - |
| AEG13_RS09630 (SAMEA1964467_01939) | 1977874..1979853 | + | 1980 | WP_001237519.1 | alkyl sulfatase dimerization domain-containing protein | - |
| AEG13_RS09635 (SAMEA1964467_01941) | 1980262..1980876 | - | 615 | WP_000848063.1 | disulfide bond formation protein B | - |
| AEG13_RS09640 (SAMEA1964467_01942) | 1980886..1981044 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| AEG13_RS09645 (SAMEA1964467_01943) | 1981177..1982091 | - | 915 | WP_001233444.1 | DMT family transporter | - |
| AEG13_RS09650 | 1983390..1983811 | - | 422 | Protein_1886 | tyrosine-type recombinase/integrase | - |
| AEG13_RS09655 (SAMEA1964467_01945) | 1983881..1985151 | + | 1271 | Protein_1887 | IS256 family transposase ISEc39 | Transposase |
| AEG13_RS09660 | 1985127..1985267 | - | 141 | WP_031624337.1 | hypothetical protein | - |
| AEG13_RS09665 | 1985436..1985702 | - | 267 | WP_010989185.1 | hypothetical protein | - |
| AEG13_RS09670 (SAMEA1964467_01947) | 1986073..1986492 | + | 420 | WP_000354403.1 | GNAT family N-acetyltransferase | - |
| AEG13_RS09675 (SAMEA1964467_01948) | 1986880..1987356 | - | 477 | WP_000030950.1 | hypothetical protein | - |
| AEG13_RS09680 (SAMEA1964467_01949) | 1987685..1988080 | - | 396 | WP_000422884.1 | DUF1398 domain-containing protein | - |
| AEG13_RS09685 (SAMEA1964467_01950) | 1988827..1989485 | + | 659 | Protein_1893 | Guanine nucleotide exchange factor sopE2 | VF |
| AEG13_RS09690 (SAMEA1964467_01951) | 1989770..1989934 | + | 165 | WP_001134857.1 | hypothetical protein | - |
| AEG13_RS09695 (SAMEA1964467_01953) | 1990158..1990808 | + | 651 | WP_000986169.1 | protein-serine/threonine phosphatase | - |
| AEG13_RS09700 (SAMEA1964467_01954) | 1990827..1991018 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| AEG13_RS09705 (SAMEA1964467_01955) | 1991129..1991365 | - | 237 | WP_024131167.1 | YebV family protein | - |
| AEG13_RS09710 (SAMEA1964467_01956) | 1991483..1992922 | - | 1440 | WP_010989184.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| AEG13_RS09715 (SAMEA1964467_01957) | 1993000..1995633 | - | 2634 | WP_001521100.1 | Intermembrane transport protein YebT | VF |
| AEG13_RS09720 (SAMEA1964467_01958) | 1995602..1996885 | - | 1284 | WP_001207300.1 | membrane integrity lipid transport subunit YebS | - |
| AEG13_RS09725 (SAMEA1964467_01959) | 1997014..1997511 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| AEG13_RS09730 (SAMEA1964467_01960) | 1997609..1998295 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| AEG13_RS09735 (SAMEA1964467_01961) | 1998315..2000363 | + | 2049 | WP_001091235.1 | carboxy terminal-processing peptidase | - |
| AEG13_RS09740 (SAMEA1964467_01962) | 2000556..2001437 | + | 882 | WP_000984498.1 | protease HtpX | - |
| AEG13_RS09745 | 2001485..2002857 | - | 1373 | Protein_1905 | MFS transporter | - |
| AEG13_RS09750 (SAMEA1964467_01965) | 2003033..2003824 | + | 792 | WP_001262197.1 | DNA-binding transcriptional regulator KdgR | - |
| AEG13_RS09755 (SAMEA1964467_01966) | 2004036..2004275 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| AEG13_RS09760 (SAMEA1964467_01967) | 2004428..2004571 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| AEG13_RS09765 (SAMEA1964467_01968) | 2004642..2004929 | + | 288 | WP_001000660.1 | YebO family protein | - |
| AEG13_RS09770 | 2005578..2005721 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| AEG13_RS09775 (SAMEA1964467_01969) | 2005734..2005943 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| AEG13_RS09780 (SAMEA1964467_01970) | 2006163..2007908 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| AEG13_RS09785 (SAMEA1964467_01971) | 2007974..2008783 | + | 810 | WP_000010934.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| AEG13_RS09790 (SAMEA1964467_01972) | 2008780..2009346 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| AEG13_RS09795 (SAMEA1964467_01973) | 2009756..2010214 | - | 459 | WP_000156273.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|