MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 39618 bp
Accession: NZ_OU701462 Location: 1..39618 Organism: Campylobacter upsaliensis strain Campylobacter upsaliensis CCUG 14913 Replicon: plasmid 2
Accession: NZ_OU701462 Location: 1..39618 Organism: Campylobacter upsaliensis strain Campylobacter upsaliensis CCUG 14913 Replicon: plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDP94_RS08480 (CU14913_001695) | 1616..2461 | + | 846 | WP_115633396.1 | YopX family protein | - |
| LDP94_RS08485 (CU14913_001696) | 2727..3056 | + | 330 | WP_004276316.1 | hypothetical protein | - |
| LDP94_RS08490 (CU14913_001697) | 3053..3475 | + | 423 | WP_082200885.1 | VapD family protein | - |
| LDP94_RS08495 (CU14913_001698) | 3515..3754 | + | 240 | WP_082200884.1 | hypothetical protein | Antitoxin Detail |
| LDP94_RS08500 (CU14913_001699) | 3754..4458 | + | 705 | WP_115633410.1 | Fic family protein | Toxin Detail |
| LDP94_RS08505 (CU14913_001700) | 4583..5242 | + | 660 | WP_115633397.1 | ParA family protein | - |
| LDP94_RS08510 (CU14913_001701) | 5295..5537 | + | 243 | WP_115633398.1 | hypothetical protein | - |
| LDP94_RS08515 (CU14913_001702) | 5854..11760 | + | 5907 | WP_181892011.1 | SNF2-related protein | - |
| LDP94_RS08520 (CU14913_001703) | 11809..12636 | + | 828 | WP_115633400.1 | hypothetical protein | - |
| LDP94_RS08525 (CU14913_001704) | 12674..12946 | + | 273 | WP_139021773.1 | hypothetical protein | - |
| LDP94_RS08530 (CU14913_001705) | 12998..13453 | - | 456 | WP_082200878.1 | hypothetical protein | - |
| LDP94_RS08535 (CU14913_001706) | 13457..15121 | - | 1665 | WP_115633401.1 | hypothetical protein | Relaxase |
| LDP94_RS08540 (CU14913_001707) | 15122..15679 | - | 558 | WP_115633402.1 | hypothetical protein | - |
| LDP94_RS08545 (CU14913_001708) | 15982..16224 | + | 243 | WP_082200907.1 | hypothetical protein | - |
| LDP94_RS08550 (CU14913_001709) | 16263..16568 | + | 306 | WP_082200906.1 | hypothetical protein | - |
| LDP94_RS08555 (CU14913_001710) | 16603..17295 | + | 693 | WP_082200905.1 | hypothetical protein | - |
| LDP94_RS08560 (CU14913_001711) | 17312..18046 | + | 735 | WP_115633403.1 | Fic family protein | - |
| LDP94_RS08565 (CU14913_001712) | 18054..19184 | + | 1131 | WP_115633404.1 | DUF5710 domain-containing protein | - |
| LDP94_RS08570 (CU14913_001713) | 19917..21710 | + | 1794 | WP_115633405.1 | AAA family ATPase | - |
| LDP94_RS08575 (CU14913_001714) | 21782..22192 | + | 411 | WP_082200901.1 | hypothetical protein | - |
| LDP94_RS08580 (CU14913_001715) | 22266..22874 | - | 609 | WP_082200900.1 | Tn3 family transposase TnBth3 | Transposase |
| LDP94_RS08585 (CU14913_001716) | 22879..23256 | - | 378 | WP_224188950.1 | VapD family protein | - |
| LDP94_RS08590 (CU14913_001717) | 23247..23570 | - | 324 | WP_082200899.1 | hypothetical protein | - |
| LDP94_RS08595 (CU14913_001718) | 23742..23999 | + | 258 | WP_082200898.1 | Type IV secretion system protein virB2 | VF |
| LDP94_RS08600 (CU14913_001719) | 24008..26779 | + | 2772 | WP_082200897.1 | Type IV secretion system protein virB4 | VF |
| LDP94_RS08605 (CU14913_001720) | 26776..27396 | + | 621 | WP_115633406.1 | Rha family transcriptional regulator | - |
| LDP94_RS08610 (CU14913_001721) | 27393..28130 | + | 738 | WP_082200895.1 | type IV secretion system protein | - |
| LDP94_RS08615 (CU14913_001722) | 28130..29125 | + | 996 | WP_115633407.1 | type IV secretion system protein | - |
| LDP94_RS08620 (CU14913_001723) | 29136..29279 | + | 144 | WP_004276297.1 | hypothetical protein | - |
| LDP94_RS08625 (CU14913_001724) | 29272..29481 | + | 210 | WP_004276298.1 | hypothetical protein | - |
| LDP94_RS08630 (CU14913_001725) | 29478..30137 | + | 660 | WP_004276299.1 | Type IV secretion system protein virB8 | VF |
| LDP94_RS08635 (CU14913_001726) | 30134..31084 | + | 951 | WP_115633408.1 | Type IV secretion system protein virB9 | VF |
| LDP94_RS08640 (CU14913_001727) | 31077..32225 | + | 1149 | WP_115633409.1 | Type IV secretion system protein virB10 | VF |
| LDP94_RS08645 (CU14913_001728) | 32222..32812 | + | 591 | WP_131937904.1 | hypothetical protein | - |
| LDP94_RS08650 (CU14913_001729) | 32809..33798 | + | 990 | WP_004276303.1 | Type IV secretion system protein VirB11 | VF |
| LDP94_RS08655 (CU14913_001730) | 33798..34520 | + | 723 | WP_115633393.1 | hypothetical protein | - |
| LDP94_RS08660 (CU14913_001731) | 34529..36325 | + | 1797 | WP_115633394.1 | Protein VirD4 | VF |
| LDP94_RS08665 (CU14913_001732) | 36322..36732 | + | 411 | WP_004276306.1 | CAG pathogenicity island protein 12 | VF |
| LDP94_RS08670 (CU14913_001733) | 36742..37335 | + | 594 | WP_082200889.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| LDP94_RS08675 (CU14913_001734) | 37335..38225 | + | 891 | WP_004276308.1 | hypothetical protein | - |
| LDP94_RS08680 (CU14913_001735) | 38345..38965 | + | 621 | WP_082200888.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|