MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 71909 bp
Accession: NZ_OU701460 Location: 1..71909 Organism: Campylobacter upsaliensis strain Campylobacter upsaliensis 17-M197059 Replicon: plasmid 2
Accession: NZ_OU701460 Location: 1..71909 Organism: Campylobacter upsaliensis strain Campylobacter upsaliensis 17-M197059 Replicon: plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDP95_RS08355 (CU197059_001665) | 436..762 | + | 327 | WP_224198564.1 | hypothetical protein | - |
| LDP95_RS08360 (CU197059_001666) | 859..1470 | + | 612 | WP_213276054.1 | hypothetical protein | - |
| LDP95_RS08365 (CU197059_001667) | 1467..1778 | + | 312 | WP_224198565.1 | hypothetical protein | - |
| LDP95_RS08370 (CU197059_001668) | 1788..2672 | + | 885 | WP_220522957.1 | hypothetical protein | - |
| LDP95_RS08375 (CU197059_001669) | 2773..2991 | + | 219 | WP_224198566.1 | hypothetical protein | - |
| LDP95_RS08380 (CU197059_001670) | 2984..3487 | + | 504 | WP_220522959.1 | thymidine kinase | - |
| LDP95_RS08385 (CU197059_001671) | 3536..3961 | + | 426 | WP_215728942.1 | hypothetical protein | - |
| LDP95_RS08390 (CU197059_001672) | 3994..4215 | + | 222 | WP_213243088.1 | hypothetical protein | - |
| LDP95_RS08395 (CU197059_001673) | 4445..5041 | + | 597 | WP_220518596.1 | hypothetical protein | - |
| LDP95_RS08400 (CU197059_001674) | 5158..6324 | + | 1167 | WP_224198567.1 | toprim domain-containing protein | - |
| LDP95_RS08405 (CU197059_001675) | 6327..6734 | + | 408 | WP_213243091.1 | hypothetical protein | - |
| LDP95_RS08410 (CU197059_001676) | 6713..6889 | + | 177 | WP_224198568.1 | hypothetical protein | - |
| LDP95_RS08415 (CU197059_001677) | 7318..7743 | + | 426 | WP_213276058.1 | hypothetical protein | - |
| LDP95_RS08420 (CU197059_001678) | 7841..9112 | + | 1272 | WP_224198569.1 | hypothetical protein | - |
| LDP95_RS08425 (CU197059_001679) | 9156..9749 | - | 594 | WP_004276666.1 | cysteine peptidase family C39 domain-containing protein | - |
| LDP95_RS08430 (CU197059_001680) | 9734..10588 | - | 855 | WP_213243095.1 | hypothetical protein | - |
| LDP95_RS08435 (CU197059_001681) | 10848..11792 | - | 945 | WP_220522969.1 | tyrosine-type recombinase/integrase | - |
| LDP95_RS08440 (CU197059_001682) | 12025..12249 | + | 225 | WP_224198570.1 | hypothetical protein | - |
| LDP95_RS08445 (CU197059_001683) | 12320..13171 | + | 852 | WP_224198571.1 | hypothetical protein | - |
| LDP95_RS08450 (CU197059_001684) | 13304..14158 | + | 855 | WP_213243095.1 | hypothetical protein | - |
| LDP95_RS08455 (CU197059_001685) | 14143..14736 | + | 594 | WP_004276666.1 | cysteine peptidase family C39 domain-containing protein | - |
| LDP95_RS08460 (CU197059_001686) | 14780..16072 | - | 1293 | WP_224198572.1 | hypothetical protein | - |
| LDP95_RS08465 (CU197059_001687) | 16170..16613 | - | 444 | WP_214148791.1 | hypothetical protein | - |
| LDP95_RS08470 (CU197059_001688) | 16943..17050 | - | 108 | WP_224198573.1 | BrnT family toxin | - |
| LDP95_RS08475 (CU197059_001689) | 17294..17599 | - | 306 | WP_004276232.1 | hypothetical protein | - |
| LDP95_RS08480 (CU197059_001690) | 17592..19211 | - | 1620 | WP_224198574.1 | HD domain-containing protein | - |
| LDP95_RS08485 (CU197059_001691) | 19211..20593 | - | 1383 | WP_224198575.1 | type IV secretion system DNA-binding domain-containing protein | - |
| LDP95_RS08490 (CU197059_001692) | 20580..21389 | - | 810 | WP_004276235.1 | hypothetical protein | - |
| LDP95_RS08495 (CU197059_001693) | 21389..22054 | - | 666 | WP_004276236.1 | hypothetical protein | - |
| LDP95_RS08500 (CU197059_001694) | 22201..22461 | + | 261 | WP_004276237.1 | helix-turn-helix transcriptional regulator | - |
| LDP95_RS08505 (CU197059_001695) | 22468..23931 | - | 1464 | WP_224198576.1 | AAA family ATPase | - |
| LDP95_RS08510 (CU197059_001696) | 23928..24356 | - | 429 | WP_115631348.1 | thioredoxin family protein | - |
| LDP95_RS08515 (CU197059_001697) | 24353..25294 | - | 942 | WP_213243744.1 | TrbC family F-type conjugative pilus assembly protein | - |
| LDP95_RS08520 (CU197059_001698) | 25306..26307 | - | 1002 | WP_004276241.1 | TraU family protein | - |
| LDP95_RS08525 (CU197059_001699) | 26304..27050 | - | 747 | WP_115631344.1 | chromosome segregation protein ParM | - |
| LDP95_RS08530 (CU197059_001700) | 27456..28055 | + | 600 | WP_004276244.1 | hypothetical protein | - |
| LDP95_RS08535 (CU197059_001701) | 28069..28338 | - | 270 | WP_039883069.1 | hypothetical protein | - |
| LDP95_RS08540 (CU197059_001702) | 28422..28682 | - | 261 | WP_004276246.1 | hypothetical protein | - |
| LDP95_RS08545 (CU197059_001703) | 28670..29587 | - | 918 | WP_004276247.1 | ParM/StbA family protein | - |
| LDP95_RS08550 (CU197059_001704) | 29819..30040 | + | 222 | WP_224198577.1 | hypothetical protein | - |
| LDP95_RS08555 (CU197059_001705) | 30090..30464 | + | 375 | WP_224198578.1 | YopX family protein | - |
| LDP95_RS08560 (CU197059_001706) | 30452..30841 | + | 390 | WP_213275851.1 | hypothetical protein | - |
| LDP95_RS08565 (CU197059_001707) | 30822..31184 | + | 363 | WP_224198579.1 | YopX family protein | - |
| LDP95_RS08570 (CU197059_001708) | 31200..31448 | + | 249 | WP_224198580.1 | hypothetical protein | - |
| LDP95_RS08575 (CU197059_001709) | 31531..31674 | + | 144 | WP_224198581.1 | hypothetical protein | - |
| LDP95_RS08580 (CU197059_001710) | 31915..32424 | + | 510 | WP_213275855.1 | hypothetical protein | - |
| LDP95_RS08585 (CU197059_001711) | 32427..33017 | + | 591 | WP_224198582.1 | thermonuclease family protein | - |
| LDP95_RS08590 (CU197059_001712) | 33111..33425 | + | 315 | WP_213275859.1 | DNA methyltransferase | - |
| LDP95_RS08595 (CU197059_001713) | 33435..33734 | + | 300 | WP_115631320.1 | hypothetical protein | - |
| LDP95_RS08600 (CU197059_001714) | 33793..34080 | - | 288 | WP_213243051.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | - |
| LDP95_RS08605 (CU197059_001715) | 34070..34300 | - | 231 | WP_115631316.1 | CopG family transcriptional regulator | - |
| LDP95_RS08610 (CU197059_001716) | 34634..35479 | + | 846 | WP_224198583.1 | BRO family protein | - |
| LDP95_RS08615 (CU197059_001717) | 35479..35910 | + | 432 | WP_004276262.1 | hypothetical protein | VF |
| LDP95_RS08620 (CU197059_001718) | 35913..36161 | + | 249 | WP_004276263.1 | hypothetical protein | - |
| LDP95_RS08625 (CU197059_001719) | 36158..36433 | - | 276 | WP_039883072.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| LDP95_RS08630 (CU197059_001720) | 36426..36737 | - | 312 | WP_004276264.1 | hypothetical protein | Antitoxin Detail |
| LDP95_RS08635 (CU197059_001721) | 36860..37492 | - | 633 | WP_213243054.1 | hypothetical protein | - |
| LDP95_RS08640 (CU197059_001722) | 37676..37957 | + | 282 | WP_004276266.1 | hypothetical protein | - |
| LDP95_RS08645 (CU197059_001723) | 37957..38262 | + | 306 | WP_004276267.1 | type IV conjugative transfer system protein TraL | - |
| LDP95_RS08650 (CU197059_001724) | 38263..38856 | + | 594 | WP_004276268.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| LDP95_RS08655 (CU197059_001725) | 38853..39635 | + | 783 | WP_004276269.1 | type-F conjugative transfer system secretin TraK | - |
| LDP95_RS08660 (CU197059_001726) | 39632..40948 | + | 1317 | WP_213243056.1 | TraB/VirB10 family protein | - |
| LDP95_RS08665 (CU197059_001727) | 40952..41716 | + | 765 | WP_213243057.1 | DsbC family protein | - |
| LDP95_RS08670 (CU197059_001728) | 41713..42624 | + | 912 | WP_224198554.1 | SH3 domain-containing protein | - |
| LDP95_RS08675 (CU197059_001729) | 42593..43075 | + | 483 | WP_004276273.1 | SH3 domain-containing protein | - |
| LDP95_RS08680 (CU197059_001730) | 43072..43524 | + | 453 | WP_224198555.1 | hypothetical protein | - |
| LDP95_RS08685 | 43521..44426 | + | 906 | WP_224198556.1 | TraC family protein | - |
| LDP95_RS08690 | 44496..46034 | + | 1539 | WP_224198557.1 | ATP-binding protein | - |
| LDP95_RS08695 (CU197059_001732) | 46031..46360 | + | 330 | WP_004276276.1 | hypothetical protein | - |
| LDP95_RS08700 (CU197059_001733) | 46314..46820 | + | 507 | WP_039883073.1 | S26 family signal peptidase | - |
| LDP95_RS08705 (CU197059_001734) | 46814..48220 | + | 1407 | WP_213243060.1 | conjugal transfer protein TraH | - |
| LDP95_RS08710 (CU197059_001735) | 48232..49416 | + | 1185 | WP_224198558.1 | hypothetical protein | - |
| LDP95_RS08715 (CU197059_001736) | 49484..51652 | + | 2169 | WP_224198559.1 | conjugal transfer protein TraN | - |
| LDP95_RS08720 (CU197059_001737) | 51748..52500 | + | 753 | WP_213243063.1 | conjugal transfer protein TraF | - |
| LDP95_RS08725 (CU197059_001738) | 52514..55174 | + | 2661 | WP_213275867.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| LDP95_RS08730 (CU197059_001739) | 55277..55888 | - | 612 | WP_220522946.1 | hypothetical protein | - |
| LDP95_RS08735 (CU197059_001740) | 56143..56517 | - | 375 | WP_220522947.1 | hypothetical protein | - |
| LDP95_RS08740 (CU197059_001741) | 56754..57611 | - | 858 | WP_213275871.1 | hypothetical protein | - |
| LDP95_RS08745 (CU197059_001742) | 57623..58336 | - | 714 | WP_224198560.1 | AAA family ATPase | - |
| LDP95_RS08750 (CU197059_001743) | 58460..58813 | + | 354 | WP_039883075.1 | helix-turn-helix transcriptional regulator | - |
| LDP95_RS08755 (CU197059_001744) | 58813..59949 | + | 1137 | WP_224198561.1 | DUF5710 domain-containing protein | - |
| LDP95_RS08760 (CU197059_001745) | 61667..62101 | + | 435 | WP_004276557.1 | hypothetical protein | - |
| LDP95_RS08765 (CU197059_001746) | 62444..62872 | + | 429 | WP_004276558.1 | single-stranded DNA-binding protein | - |
| LDP95_RS08770 (CU197059_001747) | 63454..63792 | + | 339 | WP_039883166.1 | hypothetical protein | - |
| LDP95_RS08775 (CU197059_001748) | 63894..64700 | + | 807 | WP_220522948.1 | phage recombination protein Bet | - |
| LDP95_RS08780 (CU197059_001749) | 64813..65400 | + | 588 | WP_220522949.1 | hypothetical protein | - |
| LDP95_RS08785 (CU197059_001750) | 65504..65872 | + | 369 | WP_220522950.1 | hypothetical protein | - |
| LDP95_RS08790 (CU197059_001751) | 65869..66240 | + | 372 | WP_220522951.1 | hypothetical protein | - |
| LDP95_RS08795 (CU197059_001752) | 66237..66689 | + | 453 | WP_220522952.1 | hypothetical protein | - |
| LDP95_RS08800 (CU197059_001753) | 66864..67184 | + | 321 | WP_220522953.1 | hypothetical protein | - |
| LDP95_RS08805 (CU197059_001754) | 67185..67592 | + | 408 | WP_213243073.1 | hypothetical protein | - |
| LDP95_RS08810 (CU197059_001755) | 67594..67884 | + | 291 | WP_213243074.1 | hypothetical protein | - |
| LDP95_RS08815 (CU197059_001756) | 67895..68113 | + | 219 | WP_004276569.1 | hypothetical protein | - |
| LDP95_RS08920 | 68125..68256 | + | 132 | WP_257401013.1 | hypothetical protein | - |
| LDP95_RS08820 (CU197059_001757) | 68298..68492 | + | 195 | WP_004276571.1 | hypothetical protein | - |
| LDP95_RS08825 (CU197059_001758) | 68485..68796 | + | 312 | WP_004276572.1 | hypothetical protein | - |
| LDP95_RS08830 (CU197059_001759) | 68884..69525 | + | 642 | WP_213243076.1 | hypothetical protein | - |
| LDP95_RS08835 (CU197059_001760) | 69617..70570 | + | 954 | WP_220518591.1 | Dna2/Cas4 domain-containing protein | - |
| LDP95_RS08840 (CU197059_001761) | 70739..71395 | + | 657 | WP_224198562.1 | hypothetical protein | - |
| LDP95_RS08845 (CU197059_001762) | 71388..71612 | + | 225 | WP_115631383.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|