MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 73615 bp
Accession: NZ_OU701452 Location: 3390042..3463656 Organism: Escherichia coli isolate CNR65D6 Replicon: chromosome
Accession: NZ_OU701452 Location: 3390042..3463656 Organism: Escherichia coli isolate CNR65D6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LWS60_RS16335 (3385344) | 3385344..3386600 | + | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
| LWS60_RS16340 (3386649) | 3386649..3388784 | - | 2136 | WP_001564026.1 | ornithine decarboxylase | - |
| LWS60_RS16345 (3388946) | 3388946..3389023 | - | 78 | WP_212734103.1 | hypothetical protein | - |
| LWS60_RS16350 (3389176) | 3389176..3389883 | + | 708 | WP_000234532.1 | DUF554 domain-containing protein | - |
| LWS60_RS16360 (3390262) | 3390262..3391527 | + | 1266 | WP_001218869.1 | Prophage integrase IntS ; Integrase | Integrase |
| LWS60_RS16365 (3391783) | 3391783..3392826 | + | 1044 | WP_000147018.1 | hypothetical protein | - |
| LWS60_RS16370 (3393356) | 3393356..3394053 | + | 698 | WP_224181008.1 | IS1 family transposase IS1A | Transposase |
| LWS60_RS16375 (3394070) | 3394070..3394861 | + | 792 | Protein_3208 | IS3 family transposase | - |
| LWS60_RS16380 (3395028) | 3395028..3395579 | + | 552 | WP_001447126.1 | Transcriptional repressor MprA | VF |
| LWS60_RS16390 (3396886) | 3396886..3398385 | - | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| LWS60_RS16395 (3398460) | 3398460..3400829 | - | 2370 | WP_000671170.1 | Orn/Lys/Arg decarboxylase N-terminal domain-containing protein | - |
| LWS60_RS16400 (3400934) | 3400934..3402403 | - | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| LWS60_RS16405 (3402656) | 3402656..3403349 | + | 694 | Protein_3214 | IS1 family transposase IS1N | Transposase |
| LWS60_RS16410 (3403968) | 3403968..3404315 | + | 348 | WP_001564031.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| LWS60_RS16415 (3404385) | 3404385..3404642 | + | 258 | Protein_3216 | IS3 family transposase IS911 | Transposase |
| LWS60_RS16420 (3404655) | 3404655..3404828 | - | 174 | Protein_3217 | hypothetical protein | - |
| LWS60_RS16425 (3404840) | 3404840..3405319 | - | 480 | Protein_3218 | IS3 family transposase IS629 | Transposase |
| LWS60_RS16430 (3405403) | 3405403..3406911 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| LWS60_RS25140 (3406950) | 3406950..3407072 | - | 123 | WP_001406634.1 | hypothetical protein | - |
| LWS60_RS16435 (3407583) | 3407583..3407972 | - | 390 | Protein_3221 | IS3 family transposase | - |
| LWS60_RS16440 (3407967) | 3407967..3408758 | + | 792 | Protein_3222 | ATP-dependent helicase | - |
| LWS60_RS16445 (3408806) | 3408806..3409129 | - | 324 | WP_001564033.1 | hypothetical protein | - |
| LWS60_RS16450 (3409194) | 3409194..3409838 | - | 645 | WP_106106617.1 | hypothetical protein | - |
| LWS60_RS16455 (3409859) | 3409859..3410128 | - | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| LWS60_RS16460 (3410207) | 3410207..3410845 | - | 639 | WP_001564035.1 | ParB N-terminal domain-containing protein | - |
| LWS60_RS16465 (3410830) | 3410830..3412062 | - | 1233 | WP_001564037.1 | phosphoadenosine phosphosulfate reductase | - |
| LWS60_RS16470 (3412203) | 3412203..3412847 | - | 645 | WP_024196335.1 | hypothetical protein | - |
| LWS60_RS16475 (3412964) | 3412964..3414311 | - | 1348 | Protein_3229 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| LWS60_RS16480 (3414363) | 3414363..3414549 | - | 187 | Protein_3230 | hypothetical protein | - |
| LWS60_RS16485 (3414705) | 3414705..3416450 | - | 1746 | WP_001564039.1 | NERD domain-containing protein/DEAD/DEAH box helicase | - |
| LWS60_RS16490 (3416593) | 3416593..3416853 | - | 261 | Protein_3232 | IS3 family transposase ISLad1 | Transposase |
| LWS60_RS16495 (3417574) | 3417574..3417765 | + | 192 | WP_001287883.1 | DUF4222 domain-containing protein | - |
| LWS60_RS16500 (3417818) | 3417818..3418051 | - | 234 | WP_000124185.1 | hypothetical protein | - |
| LWS60_RS16505 (3418147) | 3418147..3418647 | - | 501 | Protein_3235 | DNA-binding protein | - |
| LWS60_RS16510 (3419004) | 3419004..3420122 | + | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| LWS60_RS16515 (3420262) | 3420262..3420948 | + | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| LWS60_RS16520 (3421003) | 3421003..3421761 | + | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| LWS60_RS16525 (3421745) | 3421745..3422470 | + | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| LWS60_RS16530 (3422482) | 3422482..3422751 | + | 270 | WP_001564041.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| LWS60_RS16535 (3422779) | 3422779..3423276 | + | 498 | WP_001564042.1 | propanediol utilization system heme-binding protein GrpF | - |
| LWS60_RS16540 (3423305) | 3423305..3424501 | + | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| LWS60_RS16545 (3424786) | 3424786..3425067 | + | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| LWS60_RS16550 (3425089) | 3425089..3425874 | + | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| LWS60_RS16555 (3425935) | 3425935..3427452 | + | 1518 | WP_000997839.1 | N-succinylglutamate 5-semialdehyde dehydrogenase | VF |
| LWS60_RS16560 (3427476) | 3427476..3427775 | + | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| LWS60_RS16565 (3427786) | 3427786..3428361 | + | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| LWS60_RS16570 (3428410) | 3428410..3430962 | + | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| LWS60_RS16575 (3431071) | 3431071..3431988 | + | 918 | WP_001564043.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| LWS60_RS16580 (3432125) | 3432125..3433030 | + | 906 | WP_001564044.1 | propanediol utilization system permease GrpO | - |
| LWS60_RS16585 (3433516) | 3433516..3434055 | + | 540 | WP_001564045.1 | hypothetical protein | - |
| LWS60_RS16590 (3434083) | 3434083..3434604 | + | 522 | WP_000237741.1 | reverse transcriptase domain-containing protein | - |
| LWS60_RS16595 (3435220) | 3435220..3436482 | + | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| LWS60_RS16600 (3436499) | 3436499..3437554 | + | 1056 | WP_001564046.1 | HTH-type transcriptional activator RhaR | VF |
| LWS60_RS16605 (3437683) | 3437683..3438834 | + | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| LWS60_RS16610 (3438879) | 3438879..3439424 | + | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| LWS60_RS16615 (3439781) | 3439781..3439966 | - | 186 | WP_223349228.1 | helix-turn-helix domain-containing protein | - |
| LWS60_RS16620 (3440097) | 3440097..3440768 | - | 672 | WP_223350500.1 | TetR/AcrR family transcriptional regulator | - |
| LWS60_RS16625 (3440868) | 3440868..3442025 | - | 1158 | Protein_3259 | Multidrug resistance protein MexB | VF |
| LWS60_RS16630 (3442116) | 3442116..3442382 | + | 267 | Protein_3260 | IS3 family transposase IS2 | Transposase |
| LWS60_RS16635 (3442368) | 3442368..3442430 | - | 63 | Protein_3261 | IS3 family transposase IS2 | Transposase |
| LWS60_RS25145 (3442559) | 3442559..3442684 | - | 126 | WP_001342704.1 | hypothetical protein | - |
| LWS60_RS16640 (3442681) | 3442681..3442914 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| LWS60_RS16645 (3442983) | 3442983..3443558 | - | 576 | WP_001564054.1 | hypothetical protein | - |
| LWS60_RS16650 (3443816) | 3443816..3444382 | - | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
| LWS60_RS16655 (3445683) | 3445683..3446777 | + | 1095 | WP_000370278.1 | sugar kinase | - |
| LWS60_RS16660 (3446796) | 3446796..3448046 | - | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| LWS60_RS16665 (3448130) | 3448130..3449065 | - | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| LWS60_RS16670 (3449058) | 3449058..3449993 | - | 936 | WP_000332862.1 | pseudouridine kinase | - |
| LWS60_RS16675 (3450529) | 3450529..3450981 | - | 453 | WP_000558152.1 | acyltransferase | - |
| LWS60_RS16680 (3451502) | 3451502..3452233 | - | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| LWS60_RS16685 (3452903) | 3452903..3453433 | + | 531 | WP_000778605.1 | hypothetical protein | - |
| LWS60_RS16690 (3454596) | 3454596..3455819 | - | 1224 | WP_001107219.1 | hypothetical protein | - |
| LWS60_RS16695 (3455920) | 3455920..3456804 | + | 885 | WP_001564055.1 | YfjP family GTPase | - |
| LWS60_RS16700 (3457007) | 3457007..3457687 | + | 681 | WP_001278649.1 | WYL domain-containing protein | - |
| LWS60_RS16705 (3457838) | 3457838..3458515 | + | 678 | WP_001564058.1 | hypothetical protein | - |
| LWS60_RS16710 (3458521) | 3458521..3458754 | + | 234 | WP_001278293.1 | DUF905 family protein | - |
| LWS60_RS16715 (3458844) | 3458844..3459662 | + | 819 | WP_001564059.1 | DUF932 domain-containing protein | - |
| LWS60_RS16720 (3459928) | 3459928..3460407 | + | 480 | WP_001564060.1 | antirestriction protein | - |
| LWS60_RS16725 (3460423) | 3460423..3460899 | + | 477 | WP_021553055.1 | RadC family protein | - |
| LWS60_RS16730 (3460964) | 3460964..3461185 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| LWS60_RS16735 (3461348) | 3461348..3461716 | + | 369 | WP_021553056.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LWS60_RS16740 (3461806) | 3461806..3462183 | + | 378 | WP_001564063.1 | TA system toxin CbtA family protein | Toxin Detail |
| LWS60_RS16745 (3462180) | 3462180..3462329 | + | 150 | Protein_3284 | DUF5983 family protein | - |
| LWS60_RS16750 (3462408) | 3462408..3462602 | + | 195 | WP_024181941.1 | DUF957 domain-containing protein | - |
| LWS60_RS16755 (3462687) | 3462687..3463529 | + | 843 | Protein_3286 | DUF4942 domain-containing protein | - |
| LWS60_RS16760 (3463872) | 3463872..3464042 | + | 171 | Protein_3287 | IS110 family transposase | - |
| LWS60_RS16765 (3464852) | 3464852..3465835 | + | 984 | WP_001296394.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| LWS60_RS16770 (3465907) | 3465907..3467055 | + | 1149 | WP_000905920.1 | capsule polysaccharide export inner-membrane protein KpsE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|