MGE detailed information
MGE type: Prophage MGE length: 47291 bp
Accession: NZ_OU701452 Location: 1476919..1524209 Organism: Escherichia coli isolate CNR65D6 Replicon: chromosome
Accession: NZ_OU701452 Location: 1476919..1524209 Organism: Escherichia coli isolate CNR65D6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LWS60_RS06965 (1472908) | 1472908..1472955 | + | 48 | WP_211180494.1 | protein YnaN | - |
| LWS60_RS06970 (1472969) | 1472969..1473952 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| LWS60_RS25065 (1474227) | 1474227..1474400 | + | 174 | WP_001296046.1 | protein YnaL | - |
| LWS60_RS06975 (1474430) | 1474430..1475803 | + | 1374 | WP_001551034.1 | ATP-dependent RNA helicase DbpA | - |
| LWS60_RS06980 (1475932) | 1475932..1476867 | - | 936 | WP_000662472.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| LWS60_RS06985 (1476919) | 1476919..1478154 | - | 1236 | WP_001551035.1 | Putative defective protein IntQ ; Integrase | Integrase |
| LWS60_RS06990 (1478156) | 1478156..1478371 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (1478475) | 1478475..1478653 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1478475) | 1478475..1478653 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1478475) | 1478475..1478653 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1478475) | 1478475..1478653 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| LWS60_RS06995 (1478471) | 1478471..1478659 | - | 189 | WP_001551036.1 | DUF1187 family protein | - |
| LWS60_RS07000 (1478652) | 1478652..1478846 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| LWS60_RS07005 (1478903) | 1478903..1479712 | - | 810 | WP_001551037.1 | recombination protein RecT | - |
| LWS60_RS07010 (1479705) | 1479705..1482356 | - | 2652 | WP_001551038.1 | exodeoxyribonuclease VIII | - |
| LWS60_RS07015 (1482458) | 1482458..1482733 | - | 276 | WP_001314664.1 | hypothetical protein | - |
| LWS60_RS07020 (1482808) | 1482808..1482978 | - | 171 | WP_001551041.1 | YdaE family protein | - |
| LWS60_RS07025 (1482978) | 1482978..1483199 | - | 222 | WP_000560221.1 | killing protein KilR | - |
| LWS60_RS07030 (1483620) | 1483620..1483772 | - | 153 | WP_001551042.1 | DUF1391 family protein | - |
| LWS60_RS25070 (1483783) | 1483783..1483917 | - | 135 | WP_000233813.1 | hypothetical protein | - |
| LWS60_RS07035 (1484226) | 1484226..1484702 | - | 477 | WP_001551043.1 | DNA-binding transcriptional repressor RacR | - |
| LWS60_RS07040 (1484826) | 1484826..1485122 | + | 297 | WP_001551044.1 | toxin YdaS | - |
| LWS60_RS07045 (1485145) | 1485145..1485567 | + | 423 | WP_001551045.1 | toxin YdaT family protein | - |
| LWS60_RS07050 (1485580) | 1485580..1486437 | + | 858 | WP_001551046.1 | YdaU family protein | - |
| LWS60_RS07055 (1486444) | 1486444..1487190 | + | 747 | WP_001551047.1 | ATP-binding protein | - |
| LWS60_RS07060 (1487213) | 1487213..1487974 | + | 762 | WP_001551048.1 | DUF1627 domain-containing protein | - |
| LWS60_RS07065 (1487990) | 1487990..1488421 | + | 432 | WP_001403739.1 | DUF977 family protein | - |
| LWS60_RS07070 (1488615) | 1488615..1489769 | + | 1155 | WP_000385105.1 | ATP-binding protein | - |
| LWS60_RS07075 (1489744) | 1489744..1492008 | + | 2265 | WP_001551050.1 | S8 family peptidase | - |
| LWS60_RS07080 (1492422) | 1492422..1493021 | + | 600 | WP_000940316.1 | DUF1367 family protein | - |
| LWS60_RS07085 (1493021) | 1493021..1493311 | + | 291 | WP_001551052.1 | DUF1364 domain-containing protein | - |
| LWS60_RS07090 (1493308) | 1493308..1493850 | + | 543 | WP_000640136.1 | DUF1133 family protein | - |
| LWS60_RS07105 (1495132) | 1495132..1495347 | + | 216 | WP_000839599.1 | phage lysis protein EssD | - |
| LWS60_RS07110 (1495347) | 1495347..1495844 | + | 498 | WP_001551053.1 | lysozyme RrrD | - |
| LWS60_RS25075 (1496061) | 1496061..1496246 | + | 186 | WP_001228688.1 | prophage lysis lipoprotein RzoD | - |
| LWS60_RS07125 (1496443) | 1496443..1497900 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| LWS60_RS25080 (1498038) | 1498038..1498829 | + | 792 | WP_001291094.1 | ParB/Srx family N-terminal domain-containing protein | - |
| LWS60_RS07135 (1498822) | 1498822..1499754 | + | 933 | WP_001204037.1 | hypothetical protein | - |
| LWS60_RS07140 (1499732) | 1499732..1499941 | + | 210 | WP_000126788.1 | hypothetical protein | - |
| LWS60_RS07145 (1499945) | 1499945..1501039 | + | 1095 | WP_001551055.1 | terminase small subunit | - |
| LWS60_RS07150 (1501020) | 1501020..1502321 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| LWS60_RS07155 (1502324) | 1502324..1503730 | + | 1407 | WP_001551056.1 | DUF4055 domain-containing protein | - |
| LWS60_RS07160 (1503714) | 1503714..1504826 | + | 1113 | WP_001363932.1 | phage minor head protein | - |
| LWS60_RS07165 (1504931) | 1504931..1505695 | + | 765 | WP_001551057.1 | hypothetical protein | - |
| LWS60_RS07170 (1505794) | 1505794..1506933 | + | 1140 | WP_000918487.1 | P22 phage major capsid protein family protein | - |
| LWS60_RS07175 (1506976) | 1506976..1507152 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| LWS60_RS07180 (1507156) | 1507156..1507551 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| LWS60_RS07185 (1507551) | 1507551..1507934 | + | 384 | WP_106106620.1 | glutamate 5-kinase | - |
| LWS60_RS07190 (1507935) | 1507935..1508315 | + | 381 | WP_001551059.1 | hypothetical protein | - |
| LWS60_RS07195 (1508312) | 1508312..1508704 | + | 393 | WP_000673077.1 | phage tail terminator-like protein | - |
| LWS60_RS07200 (1508731) | 1508731..1509693 | + | 963 | WP_001551060.1 | phage tail tube protein | - |
| LWS60_RS07205 (1509844) | 1509844..1510203 | + | 360 | WP_122452218.1 | protein YdaY | - |
| LWS60_RS07210 (1510675) | 1510675..1513908 | + | 3234 | Protein_1405 | phage tail tape measure protein | - |
| LWS60_RS07215 (1513901) | 1513901..1514239 | + | 339 | WP_000024051.1 | phage tail protein | - |
| LWS60_RS07220 (1514239) | 1514239..1514937 | + | 699 | WP_001152425.1 | phage minor tail protein L | - |
| LWS60_RS07225 (1514943) | 1514943..1515686 | + | 744 | WP_032147653.1 | C40 family peptidase | - |
| LWS60_RS07230 (1515683) | 1515683..1516231 | + | 549 | WP_001551064.1 | tail assembly protein | - |
| LWS60_RS07235 (1516292) | 1516292..1519771 | + | 3480 | WP_001551065.1 | host specificity protein J | - |
| LWS60_RS07240 (1519839) | 1519839..1520438 | + | 600 | WP_001228337.1 | Outer membrane protein X | VF |
| LWS60_RS07245 (1520503) | 1520503..1522878 | + | 2376 | WP_001551066.1 | prophage tail fiber N-terminal domain-containing protein | - |
| LWS60_RS07250 (1522878) | 1522878..1523159 | + | 282 | WP_000654143.1 | hypothetical protein | - |
| LWS60_RS07255 (1523169) | 1523169..1524209 | + | 1041 | WP_001551067.1 | tail fiber domain-containing protein | - |
| LWS60_RS07260 (1524252) | 1524252..1524545 | + | 294 | WP_000355602.1 | hypothetical protein | - |
| LWS60_RS07265 (1524565) | 1524565..1524684 | + | 120 | Protein_1416 | tail fiber assembly protein | - |
| LWS60_RS07270 (1524897) | 1524897..1525754 | - | 858 | WP_000968130.1 | iron/manganese ABC transporter permease subunit SitD | - |
| LWS60_RS07275 (1525751) | 1525751..1526608 | - | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| LWS60_RS07280 (1526605) | 1526605..1527432 | - | 828 | WP_000983720.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| LWS60_RS07285 (1527432) | 1527432..1528346 | - | 915 | WP_000286867.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|