MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 73582 bp
Accession: NZ_OU701449 Location: 828188..901769 Organism: Escherichia coli isolate CNR85I8 Replicon: chromosome
Accession: NZ_OU701449 Location: 828188..901769 Organism: Escherichia coli isolate CNR85I8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LWS57_RS03930 (824789) | 824789..825937 | - | 1149 | WP_000905920.1 | capsule polysaccharide export inner-membrane protein KpsE | - |
| LWS57_RS03935 (826009) | 826009..826992 | - | 984 | WP_001296394.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| LWS57_RS03940 (827802) | 827802..827972 | - | 171 | Protein_773 | IS110 family transposase | - |
| LWS57_RS03945 (828315) | 828315..829157 | - | 843 | Protein_774 | DUF4942 domain-containing protein | - |
| LWS57_RS03950 (829242) | 829242..829436 | - | 195 | WP_024181941.1 | DUF957 domain-containing protein | - |
| LWS57_RS03955 (829515) | 829515..829664 | - | 150 | Protein_776 | DUF5983 family protein | - |
| LWS57_RS03960 (829661) | 829661..830038 | - | 378 | WP_001564063.1 | TA system toxin CbtA family protein | Toxin Detail |
| LWS57_RS03965 (830128) | 830128..830496 | - | 369 | WP_021553056.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LWS57_RS03970 (830659) | 830659..830880 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| LWS57_RS03975 (830945) | 830945..831421 | - | 477 | WP_021553055.1 | RadC family protein | - |
| LWS57_RS03980 (831437) | 831437..831916 | - | 480 | WP_001564060.1 | antirestriction protein | - |
| LWS57_RS03985 (832182) | 832182..833000 | - | 819 | WP_001564059.1 | DUF932 domain-containing protein | - |
| LWS57_RS03990 (833090) | 833090..833323 | - | 234 | WP_001278293.1 | DUF905 family protein | - |
| LWS57_RS03995 (833329) | 833329..834006 | - | 678 | WP_001564058.1 | hypothetical protein | - |
| LWS57_RS04000 (834157) | 834157..834837 | - | 681 | WP_001278649.1 | WYL domain-containing protein | - |
| LWS57_RS04005 (835040) | 835040..835924 | - | 885 | WP_001564055.1 | YfjP family GTPase | - |
| LWS57_RS04010 (836025) | 836025..837248 | + | 1224 | WP_001107219.1 | hypothetical protein | - |
| LWS57_RS04015 (838411) | 838411..838941 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| LWS57_RS04020 (839611) | 839611..840342 | + | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| LWS57_RS04025 (840863) | 840863..841315 | + | 453 | WP_000558152.1 | acyltransferase | - |
| LWS57_RS04030 (841851) | 841851..842786 | + | 936 | WP_000332862.1 | pseudouridine kinase | - |
| LWS57_RS04035 (842779) | 842779..843714 | + | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| LWS57_RS04040 (843798) | 843798..845048 | + | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| LWS57_RS04045 (845067) | 845067..846161 | - | 1095 | WP_000370278.1 | sugar kinase | - |
| LWS57_RS04050 (847462) | 847462..848028 | + | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
| LWS57_RS04055 (848286) | 848286..848861 | + | 576 | WP_001564054.1 | hypothetical protein | - |
| LWS57_RS04060 (848930) | 848930..849163 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| LWS57_RS24965 (849160) | 849160..849285 | + | 126 | WP_001342704.1 | hypothetical protein | - |
| LWS57_RS04065 (849414) | 849414..849476 | + | 63 | Protein_799 | IS3 family transposase IS2 | Transposase |
| LWS57_RS04070 (849462) | 849462..849728 | - | 267 | Protein_800 | IS3 family transposase IS2 | Transposase |
| LWS57_RS04075 (849819) | 849819..850976 | + | 1158 | Protein_801 | Multidrug resistance protein MexB | VF |
| LWS57_RS04080 (851076) | 851076..851747 | + | 672 | WP_223350500.1 | TetR/AcrR family transcriptional regulator | - |
| LWS57_RS04085 (851878) | 851878..852063 | + | 186 | WP_223349228.1 | helix-turn-helix domain-containing protein | - |
| LWS57_RS04090 (852420) | 852420..852965 | - | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| LWS57_RS04095 (853010) | 853010..854161 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| LWS57_RS04100 (854290) | 854290..855345 | - | 1056 | WP_001564046.1 | HTH-type transcriptional activator RhaR | VF |
| LWS57_RS04105 (855362) | 855362..856624 | - | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| LWS57_RS04110 (857207) | 857207..857728 | - | 522 | WP_000237741.1 | reverse transcriptase domain-containing protein | - |
| LWS57_RS04115 (857756) | 857756..858295 | - | 540 | WP_001564045.1 | hypothetical protein | - |
| LWS57_RS04120 (858781) | 858781..859686 | - | 906 | WP_001564044.1 | propanediol utilization system permease GrpO | - |
| LWS57_RS04125 (859823) | 859823..860740 | - | 918 | WP_001564043.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| LWS57_RS04130 (860849) | 860849..863401 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| LWS57_RS04135 (863450) | 863450..864025 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| LWS57_RS04140 (864036) | 864036..864335 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| LWS57_RS04145 (864359) | 864359..865876 | - | 1518 | WP_000997839.1 | N-succinylglutamate 5-semialdehyde dehydrogenase | VF |
| LWS57_RS04150 (865937) | 865937..866722 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| LWS57_RS04155 (866744) | 866744..867025 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| LWS57_RS04160 (867310) | 867310..868506 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| LWS57_RS04165 (868535) | 868535..869032 | - | 498 | WP_001564042.1 | propanediol utilization system heme-binding protein GrpF | - |
| LWS57_RS04170 (869060) | 869060..869329 | - | 270 | WP_001564041.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| LWS57_RS04175 (869341) | 869341..870066 | - | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| LWS57_RS04180 (870050) | 870050..870808 | - | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| LWS57_RS04185 (870863) | 870863..871549 | - | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| LWS57_RS04190 (871689) | 871689..872807 | - | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| LWS57_RS04195 (873164) | 873164..873664 | + | 501 | Protein_825 | DNA-binding protein | - |
| LWS57_RS04200 (873760) | 873760..873993 | + | 234 | WP_000124185.1 | hypothetical protein | - |
| LWS57_RS04205 (874046) | 874046..874237 | - | 192 | WP_001287883.1 | DUF4222 domain-containing protein | - |
| LWS57_RS24970 (874685) | 874685..874813 | + | 129 | WP_001364398.1 | hypothetical protein | - |
| LWS57_RS04210 (874958) | 874958..875218 | + | 261 | Protein_829 | IS3 family transposase ISLad1 | Transposase |
| LWS57_RS04215 (875361) | 875361..877106 | + | 1746 | WP_001564039.1 | NERD domain-containing protein/DEAD/DEAH box helicase | - |
| LWS57_RS04220 (877262) | 877262..877448 | + | 187 | Protein_831 | hypothetical protein | - |
| LWS57_RS04225 (877500) | 877500..878847 | + | 1348 | Protein_832 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| LWS57_RS04230 (878964) | 878964..879608 | + | 645 | WP_024196335.1 | hypothetical protein | - |
| LWS57_RS04235 (879749) | 879749..880981 | + | 1233 | WP_001564037.1 | phosphoadenosine phosphosulfate reductase | - |
| LWS57_RS04240 (880966) | 880966..881604 | + | 639 | WP_001564035.1 | ParB N-terminal domain-containing protein | - |
| LWS57_RS04245 (881683) | 881683..881952 | + | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| LWS57_RS04250 (881973) | 881973..882617 | + | 645 | WP_106106617.1 | hypothetical protein | - |
| LWS57_RS04255 (882682) | 882682..883005 | + | 324 | WP_001564033.1 | hypothetical protein | - |
| LWS57_RS04260 (883053) | 883053..883844 | - | 792 | Protein_839 | ATP-dependent helicase | - |
| LWS57_RS04265 (883839) | 883839..884228 | + | 390 | Protein_840 | IS3 family transposase | - |
| LWS57_RS24975 (884739) | 884739..884861 | + | 123 | WP_001406634.1 | hypothetical protein | - |
| LWS57_RS04270 (884900) | 884900..886408 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| LWS57_RS04275 (886492) | 886492..886971 | + | 480 | Protein_843 | IS3 family transposase IS629 | Transposase |
| LWS57_RS04280 (886983) | 886983..887156 | + | 174 | Protein_844 | hypothetical protein | - |
| LWS57_RS04285 (887169) | 887169..887426 | - | 258 | Protein_845 | IS3 family transposase IS911 | Transposase |
| LWS57_RS04290 (887496) | 887496..887843 | - | 348 | WP_001564031.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| LWS57_RS04295 (888462) | 888462..889155 | - | 694 | Protein_847 | IS1 family transposase IS1N | Transposase |
| LWS57_RS04300 (889408) | 889408..890877 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| LWS57_RS04305 (890982) | 890982..893351 | + | 2370 | WP_000671170.1 | Orn/Lys/Arg decarboxylase N-terminal domain-containing protein | - |
| LWS57_RS04310 (893426) | 893426..894925 | + | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| LWS57_RS04315 (895068) | 895068..895765 | + | 698 | WP_224053098.1 | IS1 family transposase IS1S | Transposase |
| LWS57_RS04320 (896232) | 896232..896783 | - | 552 | WP_001447126.1 | Transcriptional repressor MprA | VF |
| LWS57_RS04325 (896950) | 896950..897741 | - | 792 | Protein_853 | IS3 family transposase | - |
| LWS57_RS04335 (898985) | 898985..900028 | - | 1044 | WP_000147018.1 | hypothetical protein | - |
| LWS57_RS04340 (900284) | 900284..901549 | - | 1266 | WP_001218869.1 | Prophage integrase IntS ; Integrase | Integrase |
| LWS57_RS04350 (901928) | 901928..902635 | - | 708 | WP_000234532.1 | DUF554 domain-containing protein | - |
| LWS57_RS04355 (902788) | 902788..902865 | + | 78 | WP_212734103.1 | hypothetical protein | - |
| LWS57_RS04360 (903027) | 903027..905162 | + | 2136 | WP_001564026.1 | ornithine decarboxylase | - |
| LWS57_RS04365 (905211) | 905211..906467 | - | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|