MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 153987 bp
Accession: NZ_OU659151 Location: 1..153987 Organism: Providencia alcalifaciens strain 2019-04-29290-1-7 isolate 2019-04-29290-1-7 Replicon: plasmid 2
Accession: NZ_OU659151 Location: 1..153987 Organism: Providencia alcalifaciens strain 2019-04-29290-1-7 isolate 2019-04-29290-1-7 Replicon: plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDP49_RS19430 (NVI2019_NGLDDFDA_03892) | 870..1250 | + | 381 | WP_224120849.1 | hypothetical protein | VF |
| LDP49_RS19435 (NVI2019_NGLDDFDA_03893) | 1517..1966 | - | 450 | WP_224120850.1 | hypothetical protein | - |
| LDP49_RS19440 | 2241..2820 | - | 580 | Protein_3 | IS1 family transposase | - |
| LDP49_RS19445 (NVI2019_NGLDDFDA_03895) | 3170..4375 | + | 1206 | WP_282564599.1 | hypothetical protein | VF |
| LDP49_RS19450 | 4588..5726 | - | 1139 | Protein_5 | integrase core domain-containing protein | - |
| LDP49_RS19455 | 5794..5960 | + | 167 | Protein_6 | antiterminator Q family protein | - |
| LDP49_RS19460 (NVI2019_NGLDDFDA_03897) | 6158..7849 | - | 1692 | WP_224120852.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| LDP49_RS19465 (NVI2019_NGLDDFDA_03898) | 9025..9026 | - | 2 | WP_224120853.1 | IS3 family transposase ISEc36 | Transposase |
| LDP49_RS19475 | 10485..10610 | + | 126 | WP_263428788.1 | phage antirepressor N-terminal domain-containing protein | - |
| LDP49_RS19480 | 11059..11322 | + | 264 | WP_224120855.1 | lysis system i-spanin subunit Rz | - |
| LDP49_RS19490 (NVI2019_NGLDDFDA_03904) | 13111..13413 | + | 303 | WP_282564600.1 | antitoxin | - |
| LDP49_RS19495 | 13359..13646 | + | 288 | WP_282564601.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LDP49_RS19500 | 13702..14684 | - | 983 | Protein_14 | IS481 family transposase | - |
| LDP49_RS19505 (NVI2019_NGLDDFDA_03905) | 14857..15564 | + | 708 | WP_282564602.1 | hypothetical protein | VF |
| LDP49_RS19510 | 15807..16515 | - | 709 | Protein_16 | DDE-type integrase/transposase/recombinase | - |
| LDP49_RS19515 (NVI2019_NGLDDFDA_03906) | 17749..18132 | + | 384 | WP_282564603.1 | hypothetical protein | - |
| LDP49_RS19520 (NVI2019_NGLDDFDA_03907) | 18490..18828 | + | 339 | WP_282564618.1 | cytochrome b/b6 domain-containing protein | - |
| LDP49_RS19525 | 19485..20884 | + | 1400 | Protein_19 | cytochrome-c peroxidase | - |
| LDP49_RS19540 (NVI2019_NGLDDFDA_03911) | 21775..22077 | + | 303 | WP_224120862.1 | hypothetical protein | - |
| LDP49_RS19545 (NVI2019_NGLDDFDA_03912) | 22166..22465 | + | 300 | WP_224120863.1 | hypothetical protein | - |
| LDP49_RS19550 (NVI2019_NGLDDFDA_03913) | 22683..23525 | + | 843 | WP_224120864.1 | hypothetical protein | VF |
| LDP49_RS19555 (NVI2019_NGLDDFDA_03914) | 23658..24092 | - | 435 | WP_282564604.1 | hypothetical protein | - |
| LDP49_RS19560 (NVI2019_NGLDDFDA_03915) | 24437..24787 | - | 351 | WP_282564605.1 | hypothetical protein | VF |
| LDP49_RS19565 (NVI2019_NGLDDFDA_03916) | 24799..25560 | - | 762 | WP_282564606.1 | Oxygen-regulated invasion protein OrgB | VF |
| LDP49_RS19570 (NVI2019_NGLDDFDA_03917) | 25517..26119 | - | 603 | WP_224120868.1 | Oxygen-regulated invasion protein OrgA | VF |
| LDP49_RS19575 (NVI2019_NGLDDFDA_03918) | 26112..26831 | - | 720 | WP_282564607.1 | Lipoprotein PrgK | VF |
| LDP49_RS19580 (NVI2019_NGLDDFDA_03919) | 26831..27169 | - | 339 | WP_282564608.1 | hypothetical protein | VF |
| LDP49_RS19585 (NVI2019_NGLDDFDA_03920) | 27196..27444 | - | 249 | WP_224120871.1 | Protein PrgI | VF |
| LDP49_RS19590 (NVI2019_NGLDDFDA_03921) | 27465..28706 | - | 1242 | WP_282564609.1 | Protein PrgH | VF |
| LDP49_RS19595 (NVI2019_NGLDDFDA_03922) | 29042..29686 | - | 645 | WP_282564610.1 | hypothetical protein | - |
| LDP49_RS19600 (NVI2019_NGLDDFDA_03923) | 29698..30222 | - | 525 | WP_282564611.1 | hypothetical protein | VF |
| LDP49_RS19605 (NVI2019_NGLDDFDA_03924) | 30226..31911 | - | 1686 | WP_224120875.1 | Transcriptional regulator HilA | VF |
| LDP49_RS19610 (NVI2019_NGLDDFDA_03925) | 32331..32840 | + | 510 | WP_224120876.1 | hypothetical protein | VF |
| LDP49_RS19615 (NVI2019_NGLDDFDA_03926) | 32892..33134 | - | 243 | WP_224120877.1 | phosphopantetheine-binding protein | - |
| LDP49_RS19620 (NVI2019_NGLDDFDA_03927) | 33234..40172 | - | 6939 | WP_224120878.1 | hypothetical protein | VF |
| LDP49_RS19625 (NVI2019_NGLDDFDA_03928) | 40193..41257 | - | 1065 | WP_224120879.1 | Cell invasion protein SipD | VF |
| LDP49_RS19630 (NVI2019_NGLDDFDA_03929) | 41352..42578 | - | 1227 | WP_224120880.1 | Cell invasion protein SipC | VF |
| LDP49_RS19635 (NVI2019_NGLDDFDA_03930) | 42603..44381 | - | 1779 | WP_224120881.1 | Cell invasion protein SipB | VF |
| LDP49_RS19640 (NVI2019_NGLDDFDA_03931) | 44384..44884 | - | 501 | WP_036979256.1 | Chaperone protein SicA | VF |
| LDP49_RS19645 (NVI2019_NGLDDFDA_03932) | 45024..46085 | - | 1062 | WP_282564612.1 | Surface presentation of antigens protein SpaS | VF |
| LDP49_RS19650 (NVI2019_NGLDDFDA_03933) | 46105..46863 | - | 759 | Protein_42 | Surface presentation of antigens protein SpaR | VF |
| LDP49_RS19655 (NVI2019_NGLDDFDA_03934) | 46936..47130 | - | 195 | Protein_43 | Surface presentation of antigens protein SpaQ | VF |
| LDP49_RS19660 (NVI2019_NGLDDFDA_03935) | 47169..47831 | - | 663 | Protein_44 | Surface presentation of antigens protein SpaP | VF |
| LDP49_RS19665 (NVI2019_NGLDDFDA_03936) | 47834..48739 | - | 906 | WP_224120886.1 | Surface presentation of antigens protein SpaO | VF |
| LDP49_RS19670 (NVI2019_NGLDDFDA_03937) | 48739..49671 | - | 933 | WP_224120887.1 | hypothetical protein | VF |
| LDP49_RS19675 (NVI2019_NGLDDFDA_03938) | 49659..50114 | - | 456 | WP_224120888.1 | hypothetical protein | VF |
| LDP49_RS19680 (NVI2019_NGLDDFDA_03939) | 50101..51387 | - | 1287 | WP_224120900.1 | putative ATP synthase SpaL | VF |
| LDP49_RS19685 (NVI2019_NGLDDFDA_03940) | 51324..51791 | - | 468 | WP_282564613.1 | Surface presentation of antigens protein SpaK | VF |
| LDP49_RS19690 (NVI2019_NGLDDFDA_03941) | 51809..53899 | - | 2091 | WP_224120890.1 | Invasion protein InvA | VF |
| LDP49_RS19695 (NVI2019_NGLDDFDA_03942) | 53934..55043 | - | 1110 | WP_224120891.1 | Protein MxiC | VF |
| LDP49_RS19700 (NVI2019_NGLDDFDA_03943) | 55033..56760 | - | 1728 | WP_282564614.1 | Type 3 secretion system secretin | VF |
| LDP49_RS19705 (NVI2019_NGLDDFDA_03944) | 56750..57511 | - | 762 | WP_224120892.1 | hypothetical protein | VF |
| LDP49_RS19710 (NVI2019_NGLDDFDA_03945) | 58955..59584 | - | 630 | WP_224120893.1 | hypothetical protein | VF |
| LDP49_RS19715 (NVI2019_NGLDDFDA_03946) | 60454..60825 | + | 372 | WP_224120894.1 | Chaperone protein sicP | VF |
| LDP49_RS19720 (NVI2019_NGLDDFDA_03947) | 60855..62540 | + | 1686 | WP_224120895.1 | Secreted effector protein SptP | VF |
| LDP49_RS19725 (NVI2019_NGLDDFDA_03948) | 62629..63798 | + | 1170 | WP_282564615.1 | hypothetical protein | VF |
| LDP49_RS19730 | 64084..65212 | - | 1129 | Protein_58 | IS3 family transposase | - |
| LDP49_RS19735 (NVI2019_NGLDDFDA_03951) | 66016..74589 | + | 8574 | WP_224120897.1 | hypothetical protein | VF |
| LDP49_RS20195 (NVI2019_NGLDDFDA_03952) | 74969..75250 | + | 282 | WP_282564616.1 | hypothetical protein | VF |
| LDP49_RS19740 (NVI2019_NGLDDFDA_03953) | 75232..75663 | + | 432 | WP_282564617.1 | hypothetical protein | VF |
| LDP49_RS19745 | 76118..76505 | - | 388 | Protein_62 | transposase | - |
| LDP49_RS19750 | 76573..77656 | + | 1084 | Protein_63 | IS3 family transposase | - |
| LDP49_RS19755 (NVI2019_NGLDDFDA_03957) | 77712..78413 | - | 702 | WP_224120822.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| LDP49_RS19760 (NVI2019_NGLDDFDA_03958) | 78426..78632 | - | 207 | WP_224120823.1 | hypothetical protein | - |
| LDP49_RS19765 | 78915..79803 | - | 889 | Protein_66 | AAA family ATPase | - |
| LDP49_RS19770 (NVI2019_NGLDDFDA_03962) | 80041..89172 | + | 9132 | WP_282564590.1 | hypothetical protein | VF |
| LDP49_RS19775 | 89548..90021 | + | 474 | Protein_68 | IS3 family transposase | - |
| LDP49_RS19780 (NVI2019_NGLDDFDA_03963) | 90110..99805 | + | 9696 | WP_282564591.1 | hypothetical protein | VF |
| LDP49_RS19785 | 100199..101393 | + | 1195 | Protein_70 | IS3 family transposase | - |
| LDP49_RS19790 (NVI2019_NGLDDFDA_03965) | 101729..102166 | - | 438 | WP_224120826.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| LDP49_RS19795 | 102185..102391 | - | 207 | WP_224120827.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| LDP49_RS19800 | 102564..102878 | - | 315 | Protein_73 | transposase | - |
| LDP49_RS20200 | 102862..102975 | + | 114 | Protein_74 | transposase | - |
| LDP49_RS19815 (NVI2019_NGLDDFDA_03966) | 103635..104207 | - | 573 | WP_282564592.1 | ProQ/FINO family protein | - |
| LDP49_RS19820 (NVI2019_NGLDDFDA_03967) | 104912..105850 | - | 939 | WP_224120829.1 | RepA family replication protein | - |
| LDP49_RS19825 (NVI2019_NGLDDFDA_03968) | 106095..107078 | - | 984 | WP_224120830.1 | ParB family protein | - |
| LDP49_RS19830 (NVI2019_NGLDDFDA_03969) | 107068..108294 | - | 1227 | WP_155251369.1 | AAA family ATPase | - |
| LDP49_RS19835 (NVI2019_NGLDDFDA_03970) | 109135..109374 | - | 240 | WP_282564593.1 | helix-turn-helix transcriptional regulator | - |
| LDP49_RS19840 | 109689..109829 | - | 141 | Protein_80 | transposase | - |
| LDP49_RS19845 | 109817..110395 | + | 579 | Protein_81 | transposase | - |
| LDP49_RS19850 (NVI2019_NGLDDFDA_03972) | 110528..111418 | - | 891 | Protein_82 | ISNCY family transposase ISPlu22 | VF |
| LDP49_RS19860 (NVI2019_NGLDDFDA_03973) | 111738..112310 | - | 573 | WP_282564592.1 | ProQ/FINO family protein | - |
| LDP49_RS19865 (NVI2019_NGLDDFDA_03974) | 113015..113953 | - | 939 | WP_224120832.1 | RepA family replication protein | - |
| LDP49_RS19870 (NVI2019_NGLDDFDA_03975) | 114365..115369 | - | 1005 | WP_282564594.1 | hypothetical protein | Relaxase |
| LDP49_RS19880 (NVI2019_NGLDDFDA_03976) | 115475..115870 | - | 396 | WP_224120834.1 | relaxosome protein TraM | - |
| LDP49_RS19885 | 117037..117628 | + | 592 | Protein_87 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| LDP49_RS19890 (NVI2019_NGLDDFDA_03978) | 117655..118080 | - | 426 | Protein_88 | IS256 family transposase ISSod4 | Transposase |
| LDP49_RS19895 | 118070..119123 | - | 1054 | Protein_89 | IS3 family transposase ISYal1 | Transposase |
| LDP49_RS19900 | 119288..120012 | - | 725 | Protein_90 | transposase | - |
| LDP49_RS19905 (NVI2019_NGLDDFDA_03981) | 120185..121210 | + | 1026 | WP_224120835.1 | PapG chaperone-binding domain-containing protein | - |
| LDP49_RS19910 | 121296..122517 | - | 1222 | Protein_92 | transposase | - |
| LDP49_RS19915 (NVI2019_NGLDDFDA_03984) | 122587..122955 | + | 369 | WP_263428787.1 | IS200-IS605 family transposase IS609 | Transposase |
| LDP49_RS19920 (NVI2019_NGLDDFDA_03985) | 123254..124213 | - | 960 | WP_224051164.1 | ISNCY family transposase ISRor2 | VF |
| LDP49_RS20050 (NVI2019_NGLDDFDA_03986) | 124379..124762 | - | 384 | WP_051420219.1 | hypothetical protein | VF |
| LDP49_RS20055 (NVI2019_NGLDDFDA_03987) | 124768..125130 | - | 363 | WP_282564595.1 | hypothetical protein | VF |
| LDP49_RS19930 (NVI2019_NGLDDFDA_03988) | 125238..125543 | - | 306 | WP_224120837.1 | ProQ/FINO family protein | - |
| LDP49_RS19935 (NVI2019_NGLDDFDA_03989) | 125474..125788 | - | 315 | WP_224120903.1 | hypothetical protein | - |
| LDP49_RS19940 (NVI2019_NGLDDFDA_03990) | 126495..126743 | + | 249 | Protein_99 | IS3 family transposase ISYal1 | Transposase |
| LDP49_RS19945 (NVI2019_NGLDDFDA_03991) | 127617..136553 | + | 8937 | WP_224120838.1 | TcdA/TcdB catalytic glycosyltransferase domain-containing protein | - |
| LDP49_RS19950 (NVI2019_NGLDDFDA_03992) | 136810..137091 | - | 282 | WP_036974970.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LDP49_RS19955 (NVI2019_NGLDDFDA_03993) | 137081..137332 | - | 252 | WP_036974972.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LDP49_RS19960 (NVI2019_NGLDDFDA_03994) | 137491..138072 | - | 582 | WP_036982181.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| LDP49_RS19965 (NVI2019_NGLDDFDA_03995) | 138442..138960 | + | 519 | WP_224120839.1 | Pap fimbrial major pilin protein | VF |
| LDP49_RS19970 (NVI2019_NGLDDFDA_03996) | 139081..139581 | + | 501 | WP_282564619.1 | PAP fimbrial minor pilin protein | VF |
| LDP49_RS19975 (NVI2019_NGLDDFDA_03997) | 139697..142198 | + | 2502 | WP_224120841.1 | Outer membrane usher protein PapC | VF |
| LDP49_RS19980 (NVI2019_NGLDDFDA_03998) | 142292..143023 | + | 732 | WP_224120842.1 | Chaperone protein PapD | VF |
| LDP49_RS19985 (NVI2019_NGLDDFDA_03999) | 143048..143608 | + | 561 | WP_224120843.1 | pilus-assembly fibrillin subunit | - |
| LDP49_RS19990 (NVI2019_NGLDDFDA_04000) | 143622..144233 | + | 612 | WP_282564596.1 | Protein PrsK | VF |
| LDP49_RS19995 (NVI2019_NGLDDFDA_04001) | 144224..144769 | + | 546 | WP_224120845.1 | Minor fimbrial protein PrsF | VF |
| LDP49_RS20000 (NVI2019_NGLDDFDA_04002) | 145045..145830 | - | 786 | WP_224120846.1 | helix-turn-helix transcriptional regulator | - |
| LDP49_RS20005 | 146047..147282 | + | 1236 | Protein_112 | IS3 family transposase | - |
| LDP49_RS20010 (NVI2019_NGLDDFDA_04005) | 147810..151763 | + | 3954 | WP_282564597.1 | Serine protease EspC | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|