MGE detailed information
MGE type: Genomic_island MGE length: 42149 bp
Accession: NZ_OU015323 Location: 4281602..4323750 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00004549 isolate AUSMDU00004549 Replicon: chromosome
Accession: NZ_OU015323 Location: 4281602..4323750 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00004549 isolate AUSMDU00004549 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KKQ99_RS21510 (4276715) | 4276715..4277095 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| KKQ99_RS21515 (4277151) | 4277151..4279718 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| KKQ99_RS21520 (4279877) | 4279877..4280398 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| KKQ99_RS21525 (4280570) | 4280570..4281226 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| KKQ99_RS21530 (4281573) | 4281573..4281778 | + | 206 | Protein_4225 | IS5 family transposase ISEcl3 | Transposase |
| KKQ99_RS21535 (4281851) | 4281851..4282378 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| KKQ99_RS21540 (4282375) | 4282375..4282665 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| KKQ99_RS21545 (4282935) | 4282935..4283113 | - | 179 | Protein_4228 | IS3 family transposase | - |
| KKQ99_RS21550 (4283354) | 4283354..4283680 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| KKQ99_RS21555 (4283953) | 4283953..4284300 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| KKQ99_RS21560 (4284285) | 4284285..4284734 | - | 450 | WP_000381610.1 | membrane protein | - |
| KKQ99_RS21565 (4285165) | 4285165..4285608 | - | 444 | WP_000715092.1 | Type 3 secretion system pilotin | VF |
| KKQ99_RS21570 (4286065) | 4286065..4286715 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| KKQ99_RS21575 (4286712) | 4286712..4288400 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| KKQ99_RS21580 (4288397) | 4288397..4289515 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| KKQ99_RS21585 (4289540) | 4289540..4291597 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| KKQ99_RS21590 (4291621) | 4291621..4292028 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| KKQ99_RS21595 (4292025) | 4292025..4293320 | + | 1296 | WP_000856766.1 | putative ATP synthase SpaL | VF |
| KKQ99_RS21600 (4293298) | 4293298..4293741 | + | 444 | WP_001520714.1 | hypothetical protein | VF |
| KKQ99_RS21605 (4293741) | 4293741..4294751 | + | 1011 | WP_000503098.1 | hypothetical protein | VF |
| KKQ99_RS21610 (4294751) | 4294751..4295662 | + | 912 | WP_000058734.1 | Surface presentation of antigens protein SpaO | VF |
| KKQ99_RS21615 (4295652) | 4295652..4296326 | + | 675 | WP_000526016.1 | Surface presentation of antigens protein SpaP | VF |
| KKQ99_RS21620 (4296352) | 4296352..4296612 | + | 261 | WP_000342503.1 | Surface presentation of antigens protein SpaQ | VF |
| KKQ99_RS21625 (4296616) | 4296616..4297407 | + | 792 | WP_000498965.1 | Surface presentation of antigens protein SpaR | VF |
| KKQ99_RS21630 (4297394) | 4297394..4298464 | + | 1071 | WP_000097719.1 | Surface presentation of antigens protein SpaS | VF |
| KKQ99_RS21635 (4298602) | 4298602..4299099 | + | 498 | WP_000386309.1 | Chaperone protein SicA | VF |
| KKQ99_RS21640 (4299102) | 4299102..4300883 | + | 1782 | WP_000245788.1 | Cell invasion protein SipB | VF |
| KKQ99_RS21645 (4300911) | 4300911..4301216 | + | 306 | Protein_4248 | Cell invasion protein SipC | VF |
| KKQ99_RS21650 (4301242) | 4301242..4301985 | - | 744 | WP_229038580.1 | IS3 family transposase ISKpn40 | Transposase |
| KKQ99_RS21655 (4302060) | 4302060..4302374 | - | 315 | WP_039026396.1 | IS3 family transposase ISKpn40 | Transposase |
| KKQ99_RS21660 (4302428) | 4302428..4303357 | + | 930 | Protein_4251 | Cell invasion protein SipC | VF |
| KKQ99_RS21665 (4303428) | 4303428..4304459 | + | 1032 | WP_000932246.1 | Cell invasion protein SipD | VF |
| KKQ99_RS21670 (4304478) | 4304478..4306535 | + | 2058 | WP_000258811.1 | Cell invasion protein SipA | VF |
| KKQ99_RS21675 (4306554) | 4306554..4306802 | + | 249 | WP_001055577.1 | acyl carrier protein | - |
| KKQ99_RS21680 (4306846) | 4306846..4307106 | + | 261 | WP_000692254.1 | hypothetical protein | - |
| KKQ99_RS21685 (4307133) | 4307133..4307525 | + | 393 | WP_001147852.1 | Chaperone protein sicP | VF |
| KKQ99_RS21690 (4307512) | 4307512..4309143 | + | 1632 | WP_000922300.1 | Secreted effector protein SptP | VF |
| KKQ99_RS21695 (4309197) | 4309197..4309679 | - | 483 | WP_000558928.1 | hypothetical protein | VF |
| KKQ99_RS21700 (4309697) | 4309697..4311358 | - | 1662 | WP_001120085.1 | Transcriptional regulator HilA | VF |
| KKQ99_RS21705 (4312449) | 4312449..4313378 | - | 930 | WP_000432699.1 | transcriptional regulator HilD | - |
| KKQ99_RS21710 (4313694) | 4313694..4314872 | + | 1179 | WP_000450192.1 | Protein PrgH | VF |
| KKQ99_RS21715 (4314897) | 4314897..4315139 | + | 243 | WP_000235228.1 | Protein PrgI | VF |
| KKQ99_RS21720 (4315158) | 4315158..4315463 | + | 306 | WP_000020431.1 | hypothetical protein | VF |
| KKQ99_RS21725 (4315460) | 4315460..4316218 | + | 759 | WP_000621238.1 | Lipoprotein PrgK | VF |
| KKQ99_RS21730 (4316190) | 4316190..4316789 | + | 600 | WP_001574876.1 | Oxygen-regulated invasion protein OrgA | VF |
| KKQ99_RS21735 (4316746) | 4316746..4317426 | + | 681 | WP_000916654.1 | Oxygen-regulated invasion protein OrgB | VF |
| KKQ99_RS21740 (4317423) | 4317423..4317875 | + | 453 | WP_000612175.1 | hypothetical protein | VF |
| KKQ99_RS21745 (4318220) | 4318220..4319107 | + | 888 | WP_000243999.1 | HTH-type transcriptional activator RhaR | VF |
| KKQ99_RS21750 (4319288) | 4319288..4319602 | + | 315 | WP_039026396.1 | IS3 family transposase ISKpn40 | Transposase |
| KKQ99_RS21755 (4319677) | 4319677..4320420 | + | 744 | WP_229038580.1 | IS3 family transposase ISKpn40 | Transposase |
| KKQ99_RS21760 (4320709) | 4320709..4321464 | + | 756 | WP_001246659.1 | transcriptional regulator SprB | - |
| KKQ99_RS21765 (4321625) | 4321625..4322200 | + | 576 | Protein_4272 | Effector protein YopJ | VF |
| KKQ99_RS21770 (4322254) | 4322254..4322568 | + | 315 | WP_039026396.1 | IS3 family transposase ISKpn40 | Transposase |
| KKQ99_RS21775 (4322643) | 4322643..4323386 | + | 744 | WP_229038580.1 | IS3 family transposase ISKpn40 | Transposase |
| KKQ99_RS21780 (4323415) | 4323415..4323750 | + | 336 | Protein_4275 | Effector protein YopJ | VF |
| KKQ99_RS21785 (4323849) | 4323849..4324697 | - | 849 | WP_000480208.1 | iron/manganese ABC transporter permease subunit SitD | - |
| KKQ99_RS21790 (4324688) | 4324688..4325548 | - | 861 | WP_001104336.1 | iron/manganese ABC transporter permease subunit SitC | - |
| KKQ99_RS21795 (4325545) | 4325545..4326366 | - | 822 | WP_000083153.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| KKQ99_RS21800 (4326363) | 4326363..4327280 | - | 918 | WP_000182930.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
| KKQ99_RS21805 (4327462) | 4327462..4327806 | + | 345 | WP_001117947.1 | nitrous oxide-stimulated promoter family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|